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The map label for this gene is grdC [H]

Identifier: 78044225

GI number: 78044225

Start: 2143250

End: 2144779

Strand: Direct

Name: grdC [H]

Synonym: CHY_2394

Alternate gene names: 78044225

Gene position: 2143250-2144779 (Clockwise)

Preceding gene: 78044722

Following gene: 78043649

Centisome position: 89.25

GC content: 48.5

Gene sequence:

>1530_bases
ATGCCGGTCTTAAAAGGTGTTGGCCAGTGCCTCATTCATGCCCCTGACCTTTTGTACCACAACGGAACCACCCAGACGGT
TGAAAGGCTAAAAAACCCTGACTCTGAATACCTGAAAAAACTTCCCGAACATTTGCGGAAGTATGACGATGCTGTAGCTT
ACGCCCCAAACCAAGCATACATCGGTAATATCGGTCTTGAAGAGTTAAAAACCATTCCCCGCCCCTGGTACACAAACTCC
ATTAATGGAGCTTCCCGTTTTGGCAAGTACGGTGAAATAATGCCCGAAGACGAATTTTACGGACTCTTAAAAATAGCCGA
CGCCTTTGACCTCGTTATCCTGGAAGAAAGTTTTCAGGAAGAGGTCAAGGAAAAACTTGCCAAACATAAGCTAATAAACG
AACAACTGCTTGCCCGCCTTACAAACGCCAAACCCCCGGGGGAAATTGAAAAGTTGGTAACCTCCCACACAGCGGAAGGT
TTATACCTCGGGGAAAAATTAGTAGGTTGCGTGCGGCAGGCCCATGAAATTGACGAAAACTTATCGGCCCATATTATGTT
AGAAAACCTTGTGGTAAAAGCATCGGGCATTTTAGCAGTCCTCCATCTTTTAGCCAATACCGGAATTAATCCTGAGGAAG
TAGATTACATTATCGAATGTTCCGAAGAAGCCTGCGGTGACATGAACCAAAGAGGTGGCGGTAACTTTGCTAAAGCTATT
GGTGAAATTGCCGGTTTGGTAAACGCCAACGGCTCCGACGTGCGCGGCTTTTGTGCCGGTCCTGCCCATGCCCTTTTACA
TGCTGCATCCCTGGTAAAATCCGGTACCTTTAAAAACGTTGTAGTTGTAGGTGGCGGTGCCGTTGCCAAACTCGGAATGA
ACGGCAAAGACCACGTCAATAAAGGAATGCCGGTTTTAGAAGACATGCTGGGAGCTTTTGCGATACTGGTCTCGGAAAAC
GATGGCCTTAACCCAATCATCCGCCTGGATGTTATTGGCAAACACAATATTGGTAGCGGCGCTTCTCCGCAACAGGTAAT
GAAAGCCCTGGTGGCCGAACCTCTTGCCAAACTTGGCCGGAAAATCACCGAAATTGATTACTATTCGGTAGAAATGCAAA
ACCCGGAACTTACCGAACCGGCCGGCGCCGGCAACGTACCGGAAGCTAATTACAAGATGATCGGTGCTTTGGCGGTTATG
GCAGGAGAAATCGGCCGGGCCGATATCCACAAGTTCGTGGAAAAACACGGATTACCCGGCTTTGCTCCCACTCAAGGTCA
CATTCCTTCCGGAGTTCCGGCCCTTGGGTTCTTTAGGGATGCTCTCTTGGAAGGCAAAATTTCTTCGGCCATGGTTATTG
GCAAGGGGAGTCTGTTCCTGGCCCGGATGACCAACCTGTTTGACGGTTTATCGCTTTTAATTGAGAAGAACCCCGGTAAG
GTGGAGGAAACTACCGGCCTTACAAAAGAAGCCGTTCGGGAAATGGTTGCCGAGTACTTAAGGGAAATGGCCAAAGGCCT
TCTTTCCTAA

Upstream 100 bases:

>100_bases
CCGGGAGCAGGTCATAAGCCTGCTCCCCAAAATTTAGAAAGCAAGCCCATTATCCGGGCTTAAGATACAAAAACAATTTT
GACAAACGGAGGTTATAATT

Downstream 100 bases:

>100_bases
GGGGGTACAAATAAATGGAGCAGGTAAAAAGATTAATTGCGGAAGTGTTAAATGAAGCAGCGGATGTTATTGCCACCGGA
CGGGCTCTTAAAAACATCCG

Product: glycine reductase complex, protein C

Products: NA

Alternate protein names: Protein PC beta [H]

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MPVLKGVGQCLIHAPDLLYHNGTTQTVERLKNPDSEYLKKLPEHLRKYDDAVAYAPNQAYIGNIGLEELKTIPRPWYTNS
INGASRFGKYGEIMPEDEFYGLLKIADAFDLVILEESFQEEVKEKLAKHKLINEQLLARLTNAKPPGEIEKLVTSHTAEG
LYLGEKLVGCVRQAHEIDENLSAHIMLENLVVKASGILAVLHLLANTGINPEEVDYIIECSEEACGDMNQRGGGNFAKAI
GEIAGLVNANGSDVRGFCAGPAHALLHAASLVKSGTFKNVVVVGGGAVAKLGMNGKDHVNKGMPVLEDMLGAFAILVSEN
DGLNPIIRLDVIGKHNIGSGASPQQVMKALVAEPLAKLGRKITEIDYYSVEMQNPELTEPAGAGNVPEANYKMIGALAVM
AGEIGRADIHKFVEKHGLPGFAPTQGHIPSGVPALGFFRDALLEGKISSAMVIGKGSLFLARMTNLFDGLSLLIEKNPGK
VEETTGLTKEAVREMVAEYLREMAKGLLS

Sequences:

>Translated_509_residues
MPVLKGVGQCLIHAPDLLYHNGTTQTVERLKNPDSEYLKKLPEHLRKYDDAVAYAPNQAYIGNIGLEELKTIPRPWYTNS
INGASRFGKYGEIMPEDEFYGLLKIADAFDLVILEESFQEEVKEKLAKHKLINEQLLARLTNAKPPGEIEKLVTSHTAEG
LYLGEKLVGCVRQAHEIDENLSAHIMLENLVVKASGILAVLHLLANTGINPEEVDYIIECSEEACGDMNQRGGGNFAKAI
GEIAGLVNANGSDVRGFCAGPAHALLHAASLVKSGTFKNVVVVGGGAVAKLGMNGKDHVNKGMPVLEDMLGAFAILVSEN
DGLNPIIRLDVIGKHNIGSGASPQQVMKALVAEPLAKLGRKITEIDYYSVEMQNPELTEPAGAGNVPEANYKMIGALAVM
AGEIGRADIHKFVEKHGLPGFAPTQGHIPSGVPALGFFRDALLEGKISSAMVIGKGSLFLARMTNLFDGLSLLIEKNPGK
VEETTGLTKEAVREMVAEYLREMAKGLLS
>Mature_508_residues
PVLKGVGQCLIHAPDLLYHNGTTQTVERLKNPDSEYLKKLPEHLRKYDDAVAYAPNQAYIGNIGLEELKTIPRPWYTNSI
NGASRFGKYGEIMPEDEFYGLLKIADAFDLVILEESFQEEVKEKLAKHKLINEQLLARLTNAKPPGEIEKLVTSHTAEGL
YLGEKLVGCVRQAHEIDENLSAHIMLENLVVKASGILAVLHLLANTGINPEEVDYIIECSEEACGDMNQRGGGNFAKAIG
EIAGLVNANGSDVRGFCAGPAHALLHAASLVKSGTFKNVVVVGGGAVAKLGMNGKDHVNKGMPVLEDMLGAFAILVSEND
GLNPIIRLDVIGKHNIGSGASPQQVMKALVAEPLAKLGRKITEIDYYSVEMQNPELTEPAGAGNVPEANYKMIGALAVMA
GEIGRADIHKFVEKHGLPGFAPTQGHIPSGVPALGFFRDALLEGKISSAMVIGKGSLFLARMTNLFDGLSLLIEKNPGKV
EETTGLTKEAVREMVAEYLREMAKGLLS

Specific function: In the first step of glycine, betaine and sarcosine reductases, the substrate is bound to component PB via a Schiff base intermediate. Then the PB-activated substrate is nucleophilically attacked by the selenol anion of component PA to transform it to a c

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013751
- InterPro:   IPR017236
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF08545 ACP_syn_III [H]

EC number: =1.21.4.2; =1.21.4.3; =1.21.4.4 [H]

Molecular weight: Translated: 54786; Mature: 54655

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLKGVGQCLIHAPDLLYHNGTTQTVERLKNPDSEYLKKLPEHLRKYDDAVAYAPNQAY
CCCHHHHHHHHHCCCHHEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCE
IGNIGLEELKTIPRPWYTNSINGASRFGKYGEIMPEDEFYGLLKIADAFDLVILEESFQE
ECCCCHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EVKEKLAKHKLINEQLLARLTNAKPPGEIEKLVTSHTAEGLYLGEKLVGCVRQAHEIDEN
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
LSAHIMLENLVVKASGILAVLHLLANTGINPEEVDYIIECSEEACGDMNQRGGGNFAKAI
CHHHEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECCHHHCCCCCCCCCCHHHHHH
GEIAGLVNANGSDVRGFCAGPAHALLHAASLVKSGTFKNVVVVGGGAVAKLGMNGKDHVN
HHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHC
KGMPVLEDMLGAFAILVSENDGLNPIIRLDVIGKHNIGSGASPQQVMKALVAEPLAKLGR
CCCHHHHHHHHHHEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC
KITEIDYYSVEMQNPELTEPAGAGNVPEANYKMIGALAVMAGEIGRADIHKFVEKHGLPG
HHHHCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
FAPTQGHIPSGVPALGFFRDALLEGKISSAMVIGKGSLFLARMTNLFDGLSLLIEKNPGK
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHEEEECCCCC
VEETTGLTKEAVREMVAEYLREMAKGLLS
CHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PVLKGVGQCLIHAPDLLYHNGTTQTVERLKNPDSEYLKKLPEHLRKYDDAVAYAPNQAY
CCHHHHHHHHHCCCHHEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCE
IGNIGLEELKTIPRPWYTNSINGASRFGKYGEIMPEDEFYGLLKIADAFDLVILEESFQE
ECCCCHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EVKEKLAKHKLINEQLLARLTNAKPPGEIEKLVTSHTAEGLYLGEKLVGCVRQAHEIDEN
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
LSAHIMLENLVVKASGILAVLHLLANTGINPEEVDYIIECSEEACGDMNQRGGGNFAKAI
CHHHEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECCHHHCCCCCCCCCCHHHHHH
GEIAGLVNANGSDVRGFCAGPAHALLHAASLVKSGTFKNVVVVGGGAVAKLGMNGKDHVN
HHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHC
KGMPVLEDMLGAFAILVSENDGLNPIIRLDVIGKHNIGSGASPQQVMKALVAEPLAKLGR
CCCHHHHHHHHHHEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC
KITEIDYYSVEMQNPELTEPAGAGNVPEANYKMIGALAVMAGEIGRADIHKFVEKHGLPG
HHHHCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
FAPTQGHIPSGVPALGFFRDALLEGKISSAMVIGKGSLFLARMTNLFDGLSLLIEKNPGK
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHEEEECCCCC
VEETTGLTKEAVREMVAEYLREMAKGLLS
CHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8223622; 1587286 [H]