| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is vorB [H]
Identifier: 78044081
GI number: 78044081
Start: 35012
End: 36067
Strand: Direct
Name: vorB [H]
Synonym: CHY_0043
Alternate gene names: 78044081
Gene position: 35012-36067 (Clockwise)
Preceding gene: 78044629
Following gene: 78043364
Centisome position: 1.46
GC content: 48.2
Gene sequence:
>1056_bases GTGTTTATGACCGGGAACGAGGTTATCGCTTATGCGGCGGTGATGGCCGAAGCGGATATTATGTACGGTTACCCGATTAC TCCCCAAAACGAAATTATGCACTACTGGACCAGGCTTGCGCCAAAATACGGCAAAAAGTTTTTACAAACCGAGGACGAGC TCTCGGCTGGTTTTACTACCATAGGAGGGGTCCTGGCCGGAAGAAAGGCTTTTACCGCCACTGCCGGTCCTGGCAACACC TTGATGCAGGAGCCGATGTCCATGGCGGAAATGATGCGGATTCCCACCCTCTTGATAGTACAACAGCGGGGTGGTCCATC AACGGCTACCGTTATTTATTCCCAGCAGGAAGTAACGATGACCACCTATGGTGGCAACGGTGAAGGCTTTAGAATTGTCT ACTCTACCGCAAGCCACCAGGACCTTTATGATTATGTAATTAAAGGTTTTAATACCGCGTGGAAATACCGTTTCCCCACC TTTATCTTGGGCGATGGTTATCAAGCCAAAATGCGGGAAGCCTGTGTTATGTACGATCCTGCCGAAAGAGGGATCGAACT TGTAAAACCTACTCCTTACATGGGTGCTCCCGGCACTCCCGGGGTAGACCGCAAACCAAGTCATATGCGGAACACCTACA ACACCGAGGAAGAGCTGTATGAAGTGGTCATGAACCTTGCCAAAGCGTACGAAGCCATAATACCGGAAGTGGTAGAATTT GAGGAACTAAATGCCTTTGAAGCGGATACCGTTATCATTGCCCACGGTGTCGTTTCCCGGGCGGCCAAAGGAGCGGTAAA AGAACTTCTTGCCGAAGGTGAGAAAAAAGTTGGCTATTTCCGGCCAATTACCTTAAGACCTCTTGCGGTAAACGAACTAC GGGAAATTGCTCAAAGAGCCAAGAAACTGATTATAGCAGAATCTTCCTATGGTCAGCTTTTAAAGCAAATTAAAGAAGCA ATTTACGGAACCGATGTTGAAATACACACCATCTTAAAGCCGGGTGTGGGCATTACCCAGGAAGAAATCGTGGCCAAGTA CCACGAGGTTAAATAA
Upstream 100 bases:
>100_bases CCCGGTTAAGGGGTTAGTAAGATACATGCCAAAAACTTTTTGGTAATACTACGAGGAGGTGCGAAAAATGGCAAATAAGC CAATTACCGGGGAGCAAAGA
Downstream 100 bases:
>100_bases GGGAGGGATAAAGGTGAACTATCCGCAAATACCAAAAAGCTGGAATATAGAATCAAAACCCCATAAGTTTTGCCCCGGCT GTGGCCACGGGATAGCTTTG
Product: putative keto/oxoacid ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit beta; 2-oxoisovalerate oxidoreductase beta chain [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MFMTGNEVIAYAAVMAEADIMYGYPITPQNEIMHYWTRLAPKYGKKFLQTEDELSAGFTTIGGVLAGRKAFTATAGPGNT LMQEPMSMAEMMRIPTLLIVQQRGGPSTATVIYSQQEVTMTTYGGNGEGFRIVYSTASHQDLYDYVIKGFNTAWKYRFPT FILGDGYQAKMREACVMYDPAERGIELVKPTPYMGAPGTPGVDRKPSHMRNTYNTEEELYEVVMNLAKAYEAIIPEVVEF EELNAFEADTVIIAHGVVSRAAKGAVKELLAEGEKKVGYFRPITLRPLAVNELREIAQRAKKLIIAESSYGQLLKQIKEA IYGTDVEIHTILKPGVGITQEEIVAKYHEVK
Sequences:
>Translated_351_residues MFMTGNEVIAYAAVMAEADIMYGYPITPQNEIMHYWTRLAPKYGKKFLQTEDELSAGFTTIGGVLAGRKAFTATAGPGNT LMQEPMSMAEMMRIPTLLIVQQRGGPSTATVIYSQQEVTMTTYGGNGEGFRIVYSTASHQDLYDYVIKGFNTAWKYRFPT FILGDGYQAKMREACVMYDPAERGIELVKPTPYMGAPGTPGVDRKPSHMRNTYNTEEELYEVVMNLAKAYEAIIPEVVEF EELNAFEADTVIIAHGVVSRAAKGAVKELLAEGEKKVGYFRPITLRPLAVNELREIAQRAKKLIIAESSYGQLLKQIKEA IYGTDVEIHTILKPGVGITQEEIVAKYHEVK >Mature_351_residues MFMTGNEVIAYAAVMAEADIMYGYPITPQNEIMHYWTRLAPKYGKKFLQTEDELSAGFTTIGGVLAGRKAFTATAGPGNT LMQEPMSMAEMMRIPTLLIVQQRGGPSTATVIYSQQEVTMTTYGGNGEGFRIVYSTASHQDLYDYVIKGFNTAWKYRFPT FILGDGYQAKMREACVMYDPAERGIELVKPTPYMGAPGTPGVDRKPSHMRNTYNTEEELYEVVMNLAKAYEAIIPEVVEF EELNAFEADTVIIAHGVVSRAAKGAVKELLAEGEKKVGYFRPITLRPLAVNELREIAQRAKKLIIAESSYGQLLKQIKEA IYGTDVEIHTILKPGVGITQEEIVAKYHEVK
Specific function: Unknown
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N [H]
EC number: =1.2.7.7 [H]
Molecular weight: Translated: 39058; Mature: 39058
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMTGNEVIAYAAVMAEADIMYGYPITPQNEIMHYWTRLAPKYGKKFLQTEDELSAGFTT CCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHCCHHH IGGVLAGRKAFTATAGPGNTLMQEPMSMAEMMRIPTLLIVQQRGGPSTATVIYSQQEVTM HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCEEEE TTYGGNGEGFRIVYSTASHQDLYDYVIKGFNTAWKYRFPTFILGDGYQAKMREACVMYDP EEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEECCEEEECCCCHHHHHHHHEEECC AERGIELVKPTPYMGAPGTPGVDRKPSHMRNTYNTEEELYEVVMNLAKAYEAIIPEVVEF HHCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EELNAFEADTVIIAHGVVSRAAKGAVKELLAEGEKKVGYFRPITLRPLAVNELREIAQRA HHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEECCCEECCCCHHHHHHHHHHH KKLIIAESSYGQLLKQIKEAIYGTDVEIHTILKPGVGITQEEIVAKYHEVK HHEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MFMTGNEVIAYAAVMAEADIMYGYPITPQNEIMHYWTRLAPKYGKKFLQTEDELSAGFTT CCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHCCHHH IGGVLAGRKAFTATAGPGNTLMQEPMSMAEMMRIPTLLIVQQRGGPSTATVIYSQQEVTM HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCEEEE TTYGGNGEGFRIVYSTASHQDLYDYVIKGFNTAWKYRFPTFILGDGYQAKMREACVMYDP EEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEECCEEEECCCCHHHHHHHHEEECC AERGIELVKPTPYMGAPGTPGVDRKPSHMRNTYNTEEELYEVVMNLAKAYEAIIPEVVEF HHCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EELNAFEADTVIIAHGVVSRAAKGAVKELLAEGEKKVGYFRPITLRPLAVNELREIAQRA HHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEECCCEECCCCHHHHHHHHHHH KKLIIAESSYGQLLKQIKEAIYGTDVEIHTILKPGVGITQEEIVAKYHEVK HHEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]