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The map label for this gene is gerKC [H]

Identifier: 78044044

GI number: 78044044

Start: 293806

End: 294963

Strand: Direct

Name: gerKC [H]

Synonym: CHY_0337

Alternate gene names: 78044044

Gene position: 293806-294963 (Clockwise)

Preceding gene: 78043444

Following gene: 78043087

Centisome position: 12.23

GC content: 42.75

Gene sequence:

>1158_bases
ATGAAAAGAACCTTAGCGGCTTTGTTAATTATCGGGCAAATTTTCTTTTTTGGCTGTTGGAGCAGAATGGAATTAGAAGA
TTTAGCAATTGTGCAGGGCGTAGGGGTGGATGAAAATAAAAAAGGTTTAAAAAAAGACCGGTACTTATTTTCGGTGCAGG
TGGTCAATCCCAGCGCTCTTACCAGTAAGGGAGGTGGCGGTGGAGAAAAGCCTTACGTCATAAGACTTATTAGCGGCGAA
CTTTTTTTTACCTCTTTGCGGGAACTTAATATGGAAACGGCTTTACGCCTGTATTATGCCCACAACCGGGTGATACTTAT
TTCTGAAGATGTAGCCCGGCGCGGTTTAAAAAACCTTTTGGATTTTTTTGAGAGAAACCCGCAGTTTCGCCGGGATAATT
ACGTATTAATAGTTCAGGGTAAGGCTGTTGATGTTTGGGATGGGTTTTCTGGTCTGGTAAAGGTTCCGGCAATAGCTATC
TATGATTTAGCTCAAAAGTCGTATCTTACTGCGGAAGCAGGGATTATCGAATTAGGGGATTTTATAGAACTGTTGGAAGA
GGAAGGAGTGGACCCTTACGCTCCGGGGGTAAAGATTTTGACCAAGAAGGGACGGAAAGATATTCGGGTATTTCAAACGG
CTCTTTTTAAAAACGACAAGTTGGCGGGCTGGCTTGATGAAAAACAGTCTCGGGGTTTGCTGATTGTTACCAACAAAGTG
AAAGGCGGGATTACTGATGTTACTAACCCCTTTAATCCCGAAGACAAGCTTTCGGTAGAATTGGAAAGGTCAAAAACCCA
GTGGGAACTGAAAGTGTTTGAAGATAAACCTGTTGTGAAACTTAAGGTGGAAACAGAAGGGATTATAACCGAGGCCCAGA
ACGGCCTTGATTTTAGTAAAAAGGAAACTTTTCAAAAATTAAATCGGGAGTATGCCAAATCGGTCCGCCGCGATATTTTG
GCGTTTATTAATAAAACCAAGGAAATTGGCGCAGATCCTGCCGGTTTTGGCCGTTTTATCTACCGGGAAAACCCCGGGCT
CTGGCAGGAGTTAAAAGATGACTGGGAGGAGGAAATTAAAAATTTGACGATAGAGGTAAAGGTTCAAGCTAAAATTGTTA
GAACAGGGATGACAACCGCTTCAATTAAACCCCAGTAG

Upstream 100 bases:

>100_bases
GGTGGCTTATGGTCAAGAGGCCCAAACACTTTCGTCCACTGGATGAGCGGCGGATAAAAGAAGGATTAAGACCGGGCTTT
CCGAAAGGGGAAAAAAGGAG

Downstream 100 bases:

>100_bases
GGTGGTGGTTTTCTTGGCATATCTTGTGGTAGGGTTATATTTGCTGATATTGGGTGTTTTTGGCTATCCCCTCCTGCGGG
ATAGGGAATACCGGGAATTA

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKRTLAALLIIGQIFFFGCWSRMELEDLAIVQGVGVDENKKGLKKDRYLFSVQVVNPSALTSKGGGGGEKPYVIRLISGE
LFFTSLRELNMETALRLYYAHNRVILISEDVARRGLKNLLDFFERNPQFRRDNYVLIVQGKAVDVWDGFSGLVKVPAIAI
YDLAQKSYLTAEAGIIELGDFIELLEEEGVDPYAPGVKILTKKGRKDIRVFQTALFKNDKLAGWLDEKQSRGLLIVTNKV
KGGITDVTNPFNPEDKLSVELERSKTQWELKVFEDKPVVKLKVETEGIITEAQNGLDFSKKETFQKLNREYAKSVRRDIL
AFINKTKEIGADPAGFGRFIYRENPGLWQELKDDWEEEIKNLTIEVKVQAKIVRTGMTTASIKPQ

Sequences:

>Translated_385_residues
MKRTLAALLIIGQIFFFGCWSRMELEDLAIVQGVGVDENKKGLKKDRYLFSVQVVNPSALTSKGGGGGEKPYVIRLISGE
LFFTSLRELNMETALRLYYAHNRVILISEDVARRGLKNLLDFFERNPQFRRDNYVLIVQGKAVDVWDGFSGLVKVPAIAI
YDLAQKSYLTAEAGIIELGDFIELLEEEGVDPYAPGVKILTKKGRKDIRVFQTALFKNDKLAGWLDEKQSRGLLIVTNKV
KGGITDVTNPFNPEDKLSVELERSKTQWELKVFEDKPVVKLKVETEGIITEAQNGLDFSKKETFQKLNREYAKSVRRDIL
AFINKTKEIGADPAGFGRFIYRENPGLWQELKDDWEEEIKNLTIEVKVQAKIVRTGMTTASIKPQ
>Mature_385_residues
MKRTLAALLIIGQIFFFGCWSRMELEDLAIVQGVGVDENKKGLKKDRYLFSVQVVNPSALTSKGGGGGEKPYVIRLISGE
LFFTSLRELNMETALRLYYAHNRVILISEDVARRGLKNLLDFFERNPQFRRDNYVLIVQGKAVDVWDGFSGLVKVPAIAI
YDLAQKSYLTAEAGIIELGDFIELLEEEGVDPYAPGVKILTKKGRKDIRVFQTALFKNDKLAGWLDEKQSRGLLIVTNKV
KGGITDVTNPFNPEDKLSVELERSKTQWELKVFEDKPVVKLKVETEGIITEAQNGLDFSKKETFQKLNREYAKSVRRDIL
AFINKTKEIGADPAGFGRFIYRENPGLWQELKDDWEEEIKNLTIEVKVQAKIVRTGMTTASIKPQ

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 43645; Mature: 43645

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLAALLIIGQIFFFGCWSRMELEDLAIVQGVGVDENKKGLKKDRYLFSVQVVNPSAL
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCCCCCCCCCCCCEEEEEEEECCHHH
TSKGGGGGEKPYVIRLISGELFFTSLRELNMETALRLYYAHNRVILISEDVARRGLKNLL
CCCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHEEEEEECCEEEEEECHHHHHHHHHHH
DFFERNPQFRRDNYVLIVQGKAVDVWDGFSGLVKVPAIAIYDLAQKSYLTAEAGIIELGD
HHHHCCCCCCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCEEHHHH
FIELLEEEGVDPYAPGVKILTKKGRKDIRVFQTALFKNDKLAGWLDEKQSRGLLIVTNKV
HHHHHHHCCCCCCCCCHHEEECCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCEEEEEECC
KGGITDVTNPFNPEDKLSVELERSKTQWELKVFEDKPVVKLKVETEGIITEAQNGLDFSK
CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCEECCCCCCCCHH
KETFQKLNREYAKSVRRDILAFINKTKEIGADPAGFGRFIYRENPGLWQELKDDWEEEIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
NLTIEVKVQAKIVRTGMTTASIKPQ
CCEEEEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKRTLAALLIIGQIFFFGCWSRMELEDLAIVQGVGVDENKKGLKKDRYLFSVQVVNPSAL
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCCCCCCCCCCCCEEEEEEEECCHHH
TSKGGGGGEKPYVIRLISGELFFTSLRELNMETALRLYYAHNRVILISEDVARRGLKNLL
CCCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHEEEEEECCEEEEEECHHHHHHHHHHH
DFFERNPQFRRDNYVLIVQGKAVDVWDGFSGLVKVPAIAIYDLAQKSYLTAEAGIIELGD
HHHHCCCCCCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCEEHHHH
FIELLEEEGVDPYAPGVKILTKKGRKDIRVFQTALFKNDKLAGWLDEKQSRGLLIVTNKV
HHHHHHHCCCCCCCCCHHEEECCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCEEEEEECC
KGGITDVTNPFNPEDKLSVELERSKTQWELKVFEDKPVVKLKVETEGIITEAQNGLDFSK
CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCEECCCCCCCCHH
KETFQKLNREYAKSVRRDILAFINKTKEIGADPAGFGRFIYRENPGLWQELKDDWEEEIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
NLTIEVKVQAKIVRTGMTTASIKPQ
CCEEEEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]