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The map label for this gene is rpmH

Identifier: 78043997

GI number: 78043997

Start: 225

End: 359

Strand: Direct

Name: rpmH

Synonym: CHY_0001

Alternate gene names: 78043997

Gene position: 225-359 (Clockwise)

Preceding gene: NA

Following gene: 78045102

Centisome position: 0.01

GC content: 46.67

Gene sequence:

>135_bases
ATGAAAAGAACCTACCAACCAAAAAACCGGCGGCGTAAAAGAGTGCACGGCTTCTTAAAGCGGATGCGGACCCCAGGCGG
GCGAAATGTAATTAAAAGACGGCGGCTTAAAGGTAGAAAAAGACTTACTGCATAA

Upstream 100 bases:

>100_bases
ACTCAAGAAAAATTTCTTGACGGGTCTTATCCCATCTTCTATAATTTAGGTGTATCTATAGGGGATATAGGCTTTTTTAG
ATAGATTAGGAGGTGTGAAA

Downstream 100 bases:

>100_bases
AGGCCCAACGGGCCTTTATTCTGTATAAGCTTCTCGAATTTGGGAAATCCTTTTAAAAGATGTGCTATGAATAAATGCCG
GTTTCTTTCTAAAAACGAAG

Product: 50S ribosomal protein L34

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MKRTYQPKNRRRKRVHGFLKRMRTPGGRNVIKRRRLKGRKRLTA

Sequences:

>Translated_44_residues
MKRTYQPKNRRRKRVHGFLKRMRTPGGRNVIKRRRLKGRKRLTA
>Mature_44_residues
MKRTYQPKNRRRKRVHGFLKRMRTPGGRNVIKRRRLKGRKRLTA

Specific function: Unknown

COG id: COG0230

COG function: function code J; Ribosomal protein L34

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_CARHZ (Q3AG61)

Other databases:

- EMBL:   CP000141
- RefSeq:   YP_358873.1
- ProteinModelPortal:   Q3AG61
- SMR:   Q3AG61
- STRING:   Q3AG61
- GeneID:   3726232
- GenomeReviews:   CP000141_GR
- KEGG:   chy:CHY_0001
- NMPDR:   fig|246194.3.peg.99
- TIGR:   CHY_0001
- eggNOG:   COG0230
- HOGENOM:   HBG729750
- ProtClustDB:   PRK00399
- BioCyc:   CHYD246194:CHY_0001-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00391
- InterPro:   IPR000271
- InterPro:   IPR020939
- ProDom:   PD003101
- TIGRFAMs:   TIGR01030

Pfam domain/function: PF00468 Ribosomal_L34

EC number: NA

Molecular weight: Translated: 5460; Mature: 5460

Theoretical pI: Translated: 13.25; Mature: 13.25

Prosite motif: PS00784 RIBOSOMAL_L34

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTYQPKNRRRKRVHGFLKRMRTPGGRNVIKRRRLKGRKRLTA
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRTYQPKNRRRKRVHGFLKRMRTPGGRNVIKRRRLKGRKRLTA
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA