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The map label for this gene is 78043996

Identifier: 78043996

GI number: 78043996

Start: 1536097

End: 1536525

Strand: Direct

Name: 78043996

Synonym: CHY_1722

Alternate gene names: NA

Gene position: 1536097-1536525 (Clockwise)

Preceding gene: 78044919

Following gene: 78043639

Centisome position: 63.96

GC content: 31.47

Gene sequence:

>429_bases
ATGAACGTCTTGATTGACACTAACGTTATTTTGGATGTACTTGGCAAGCGTGAACCTTTTTTTCAGCACTCAACGTCAAT
TTTAATGTTGGCCGCTAAAAATAAAATATCAGCTTCTATAACTGCTAATAGCTTAACCGATCTACATTATTTATTAAAAA
AGTACCTTAAAAACAATGAACAAATAAAAAATGCTCTTAAAAGCTTAATAGAAATTTTAGATATTGTTGACATTACAAAA
AACGATTGTCTAAAAGCCTTTGATTTACCCATGGACGATTATGAAGATGCTCTTCTTGCGTTTTGTGCAAAACGGGTTAA
AGCTGATTATATCATTACCAGAAACATAAAAGATTTTCTAAATTCACCCGTAAATCCAATTACCCCGGAAGATTTTATCT
CACGCTTTTTTGCCGAAGAAAATATTTGA

Upstream 100 bases:

>100_bases
AGTGCTGTAGAAGACAAAACTGCTCTTGTTAAATCTTTAATAGGTATTTTGCCTCATACCATATCCGAAAAGGAAGCAAG
AGAGGAGCGCCTTGCAAAAC

Downstream 100 bases:

>100_bases
TGCTTACTTAGTTTTACATTAAATATTCCTCTAACATCTCCACTTCAACCACCGGAGCTTTACAGCTAAAGTTTTCACAC
ACGTAAACCGTAGCCCTTTC

Product: PilT domain-containing protein

Products: NA

Alternate protein names: PilT Protein Domain Protein; PIN Domain Protein; PIN Domain-Containing Protein; PilT Protein Domain-Containing Protein; Pilt Protein Domain Protein

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MNVLIDTNVILDVLGKREPFFQHSTSILMLAAKNKISASITANSLTDLHYLLKKYLKNNEQIKNALKSLIEILDIVDITK
NDCLKAFDLPMDDYEDALLAFCAKRVKADYIITRNIKDFLNSPVNPITPEDFISRFFAEENI

Sequences:

>Translated_142_residues
MNVLIDTNVILDVLGKREPFFQHSTSILMLAAKNKISASITANSLTDLHYLLKKYLKNNEQIKNALKSLIEILDIVDITK
NDCLKAFDLPMDDYEDALLAFCAKRVKADYIITRNIKDFLNSPVNPITPEDFISRFFAEENI
>Mature_142_residues
MNVLIDTNVILDVLGKREPFFQHSTSILMLAAKNKISASITANSLTDLHYLLKKYLKNNEQIKNALKSLIEILDIVDITK
NDCLKAFDLPMDDYEDALLAFCAKRVKADYIITRNIKDFLNSPVNPITPEDFISRFFAEENI

Specific function: Unknown

COG id: COG2402

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16210; Mature: 16210

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLIDTNVILDVLGKREPFFQHSTSILMLAAKNKISASITANSLTDLHYLLKKYLKNNE
CCEEECHHHHHHHHCCCCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCH
QIKNALKSLIEILDIVDITKNDCLKAFDLPMDDYEDALLAFCAKRVKADYIITRNIKDFL
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCHHHHH
NSPVNPITPEDFISRFFAEENI
CCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVLIDTNVILDVLGKREPFFQHSTSILMLAAKNKISASITANSLTDLHYLLKKYLKNNE
CCEEECHHHHHHHHCCCCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCH
QIKNALKSLIEILDIVDITKNDCLKAFDLPMDDYEDALLAFCAKRVKADYIITRNIKDFL
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCHHHHH
NSPVNPITPEDFISRFFAEENI
CCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA