| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043964
Identifier: 78043964
GI number: 78043964
Start: 2364692
End: 2365672
Strand: Direct
Name: 78043964
Synonym: CHY_2660
Alternate gene names: NA
Gene position: 2364692-2365672 (Clockwise)
Preceding gene: 78043428
Following gene: 78044372
Centisome position: 98.47
GC content: 29.46
Gene sequence:
>981_bases ATGGAAACAGATAAAAAAAGTATTATACTTAATTTATACTGTGATGAAATAAAAGAATACCCTCTTAAAATACCTTTTAT TAACACTTTTGAAAAATGGACATATATAGGAATGCTTATTGTACCAGAATTTATATCTGATAAGCTCTACAAAGATTTGA TAAACTTACGATGTCTTTCACAACCACCTAAACCGTGGGGTAGTTGCTCAGAGCCTTGTCCTTACCACAATTTAAATAAT ACAGAAATCCATTATCAAAACACAGATGATTCAATAAAATATAAGATAGCTTCCAATTGGGTAAAGTATTGGCTTGATGA CAGGGAAAATATCTACTTTTACATACTCGGTATTAACCTTACAAAATTAGATCTGGATAAATTCGGCCCCAAAAATCAAA AAGATAAACACTCAACTATTTACAATAGATTTTTTAGAACTGCACTAAAAAAGGCTTTGAAAACTTATTTTAGAGATTAT GATAGCATAATCGTCAAAAATATTTTTCATGATAAAGGCAATGCTGAATACCATGAATATTTCCCATGGCACTCTATTTA TAAGTTACAATCCGAAGAAGATAAAATTTATTTTGCCAACAACCATATAAAATTCATTAATTCCGACCACCGCAAACCCG ACGGAGATCCTGTACATTCACAGTTTATCCAATTTATTGATATAATTCTTGGATGTTTTGCAAATAGTCTTCATTTAAAT GCGACGAGTAAAAATAAATATTCTCTAACAGTTAGTGCTTTTCCTATTATAAGGCGAATTATAAAAAACCCTAATAACCC TAACAGCAGATATAACTACTATAAAAGACAAATGGTACAGTTTTTCCCCAAGGAAGATTTAAAAGGTATGGATGAACAAA GCCTTGAATACAGATATAAAAAGTTAAATCAATTCTATACTAATAGAGAGTTACCAATAGAAAGAAAAATAAACGGACAA TTATCCATATTTGATTTATAA
Upstream 100 bases:
>100_bases CGTAGCACTTATTCCCTTTTTCTTAATCAATTTTTAGCTGCTATTTTTTTGCCCTTTAATGTTATAATTATGGTGAATAA TTCCAAAAGGAAGGATATAT
Downstream 100 bases:
>100_bases AATATTACTCTTAATAAACAAAATCATTTTTCTTTACATTAAGAAAGCAATAAATTACTTATTATAGGCTAAAATCTCCC ATATAAAAATTATTATACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues METDKKSIILNLYCDEIKEYPLKIPFINTFEKWTYIGMLIVPEFISDKLYKDLINLRCLSQPPKPWGSCSEPCPYHNLNN TEIHYQNTDDSIKYKIASNWVKYWLDDRENIYFYILGINLTKLDLDKFGPKNQKDKHSTIYNRFFRTALKKALKTYFRDY DSIIVKNIFHDKGNAEYHEYFPWHSIYKLQSEEDKIYFANNHIKFINSDHRKPDGDPVHSQFIQFIDIILGCFANSLHLN ATSKNKYSLTVSAFPIIRRIIKNPNNPNSRYNYYKRQMVQFFPKEDLKGMDEQSLEYRYKKLNQFYTNRELPIERKINGQ LSIFDL
Sequences:
>Translated_326_residues METDKKSIILNLYCDEIKEYPLKIPFINTFEKWTYIGMLIVPEFISDKLYKDLINLRCLSQPPKPWGSCSEPCPYHNLNN TEIHYQNTDDSIKYKIASNWVKYWLDDRENIYFYILGINLTKLDLDKFGPKNQKDKHSTIYNRFFRTALKKALKTYFRDY DSIIVKNIFHDKGNAEYHEYFPWHSIYKLQSEEDKIYFANNHIKFINSDHRKPDGDPVHSQFIQFIDIILGCFANSLHLN ATSKNKYSLTVSAFPIIRRIIKNPNNPNSRYNYYKRQMVQFFPKEDLKGMDEQSLEYRYKKLNQFYTNRELPIERKINGQ LSIFDL >Mature_326_residues METDKKSIILNLYCDEIKEYPLKIPFINTFEKWTYIGMLIVPEFISDKLYKDLINLRCLSQPPKPWGSCSEPCPYHNLNN TEIHYQNTDDSIKYKIASNWVKYWLDDRENIYFYILGINLTKLDLDKFGPKNQKDKHSTIYNRFFRTALKKALKTYFRDY DSIIVKNIFHDKGNAEYHEYFPWHSIYKLQSEEDKIYFANNHIKFINSDHRKPDGDPVHSQFIQFIDIILGCFANSLHLN ATSKNKYSLTVSAFPIIRRIIKNPNNPNSRYNYYKRQMVQFFPKEDLKGMDEQSLEYRYKKLNQFYTNRELPIERKINGQ LSIFDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39126; Mature: 39126
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METDKKSIILNLYCDEIKEYPLKIPFINTFEKWTYIGMLIVPEFISDKLYKDLINLRCLS CCCCCCEEEEEEEHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QPPKPWGSCSEPCPYHNLNNTEIHYQNTDDSIKYKIASNWVKYWLDDRENIYFYILGINL CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEEEE TKLDLDKFGPKNQKDKHSTIYNRFFRTALKKALKTYFRDYDSIIVKNIFHDKGNAEYHEY EEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC FPWHSIYKLQSEEDKIYFANNHIKFINSDHRKPDGDPVHSQFIQFIDIILGCFANSLHLN CCHHHHEEECCCCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE ATSKNKYSLTVSAFPIIRRIIKNPNNPNSRYNYYKRQMVQFFPKEDLKGMDEQSLEYRYK ECCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHH KLNQFYTNRELPIERKINGQLSIFDL HHHHHHCCCCCCEEECCCCEEEEEEC >Mature Secondary Structure METDKKSIILNLYCDEIKEYPLKIPFINTFEKWTYIGMLIVPEFISDKLYKDLINLRCLS CCCCCCEEEEEEEHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QPPKPWGSCSEPCPYHNLNNTEIHYQNTDDSIKYKIASNWVKYWLDDRENIYFYILGINL CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEEEE TKLDLDKFGPKNQKDKHSTIYNRFFRTALKKALKTYFRDYDSIIVKNIFHDKGNAEYHEY EEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC FPWHSIYKLQSEEDKIYFANNHIKFINSDHRKPDGDPVHSQFIQFIDIILGCFANSLHLN CCHHHHEEECCCCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE ATSKNKYSLTVSAFPIIRRIIKNPNNPNSRYNYYKRQMVQFFPKEDLKGMDEQSLEYRYK ECCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHH KLNQFYTNRELPIERKINGQLSIFDL HHHHHHCCCCCCEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA