Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is iorA [H]

Identifier: 78043951

GI number: 78043951

Start: 103803

End: 105548

Strand: Direct

Name: iorA [H]

Synonym: CHY_0121

Alternate gene names: 78043951

Gene position: 103803-105548 (Clockwise)

Preceding gene: 78044039

Following gene: 78044852

Centisome position: 4.32

GC content: 49.83

Gene sequence:

>1746_bases
ATGGCCAGGTTAATGACCGGAAACGAAGCGATTGCCCGGGGTGCTTTTGAAGCGGGGGTAAAAATTGGGGTGGGCTATCC
CGGTACTCCCAGTACGGAGATTTTGGAGAATTTTGCCAGGTACCCGGGGGTCTATGCCCAGTGGTCGCCCAATGAGAAAG
TAGCTTTAGAGGTGGGGATTGGAGCTTCCCTTGCCGGAGCTCGAACCCTGGTGACCATGAAACATGTTGGGGTGAACGTG
GCAGCGGATTCGCTTTTAACCTTGAGCTATACCGGTGTAAATGCGGGGCTGGTGCTGGTATCCGCCGATGATCCCGGACT
GCACAGTTCCCAGAACGAACAGGATAACCGTTATTACGGTAAACTGGCTAAAATACCGGTATTGGAACCCTCGGACAGTG
AAGAGGCCCGCAAGTTTGTGAAACTTGCCTATGAATTAAGTGAAGAGTTTGATACACCGGTTATTTTAAGGACAACCACC
AGGATTGCCCATACCCATACGTTAGTGATTGAGGAGGAACCCCGGGAGGTAAGCTTAAAGCCGTACGTTAAAAACCCGCA
AAAGTACGTGATGGTTCCGGGAAATGCCCGGTTGCGCCATCAGGTGGTGGAGGAGCGACGGCAGAAGCTTTTGGAATATG
CCGAAATTACTCCGTTAAACCGGATAGAAGAGGGAACGGGGGATGTGGGCTTTATTACGTCGGGAATAAGCTACCAGTAT
GTTAAAGAAGCTTTTCCCGGCTCTCCGGTTTTAAAGCTCGGACTTACCTGGCCGCTTCCGGAAAAACTTATTTTAAAATT
TGCCGAAAAGGTTAAAACCATCATAGTGGTGGAAGAATTGGAGCCGTACATAGAAGAACACGTGCGTGCCCTGGGGTTAA
AAGTCGTGGGCAAGGAAATTATCCCCCGTACCGGTGAGTTAAACCACTATATTGTGCAAAAGGCGGTTTTAAAATACCTG
GGAGAGGATATAGCCGATTTCCTTGAGAATTTGGATTTACCCCAGAGGCCGCCGGTAATGTGTCCGGGCTGTCCGCACCG
GCCGGTGTTTTATATTTTAAGTGAACTTAAACTTACGGTAACCGGTGATATCGGCTGCTACACCTTAGGGGTAATGCCAC
CTTTAGGGGCAATTGATACTACCGTTTGCATGGGAGCGGGCATCGGAATGGCTTTAGGAATGGAAAAAGCCAATCCGGAT
TTTTCCGGGAAAACGGTAGCGGTTATTGGCGATTCAACTTTTTTACATTCGGGGATTACACCTTTAATCGATATGGTATA
TAATGGAGGCAAAGGGACTATATTAATACTGGATAACCGCACCACGGCAATGACCGGCCACCAGCCCCACCCGGCAACGG
GTAAAACCTTAATGGGAGAACCGGCACCTCAAGTGGATTTTGAGGCGTTGGCCAGGGCGTTAGGGGTAAAGCGGGTTACG
ACCGTTGATCCCTTTGATCTGCAGCAACTGAGAGCGGTTATAACCGAGGAAGTAGCGGCCGGAGAGGTATCGGTAGTGGT
GGTGCGGCGGGAATGTGCGCTGTTGCCCAATCAAACCCGGGAGCCCCTAACGGTAATTTCGGAAAAATGTACCGGTTGCC
AGCGCTGCTTGAAGTTAGGCTGCCCGGCAATAGCCATTAAAGATAAGAAAGCTTCTATTGACCCGCTTTTATGTAACGGT
TGCGGGGTATGTGCCCAGGTTTGTAAATTTTCGGCCATAATAAAGGGTGGTGATTCCCTTGGATAA

Upstream 100 bases:

>100_bases
CGCCAAGGTAAAGCTTTTGGAACCAAGGTCCCTGGAGCGCTCCGAAGGTAAAGCCAAACGAGTAATAGATTTAAGAAATA
GCGGAGAAAGGGGATAGAGA

Downstream 100 bases:

>100_bases
AAATATTTTACTGGCCGGAGTTGGCGGGCAGGGGACTATTCTGGCAAGTAAAATTATTGCCGGGGTAGCGGAAAAGGCTG
GACTTGATGTTAAAGTAGCC

Product: indolepyruvate ferredoxin oxidoreductase subunit IorA

Products: NA

Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 581; Mature: 580

Protein sequence:

>581_residues
MARLMTGNEAIARGAFEAGVKIGVGYPGTPSTEILENFARYPGVYAQWSPNEKVALEVGIGASLAGARTLVTMKHVGVNV
AADSLLTLSYTGVNAGLVLVSADDPGLHSSQNEQDNRYYGKLAKIPVLEPSDSEEARKFVKLAYELSEEFDTPVILRTTT
RIAHTHTLVIEEEPREVSLKPYVKNPQKYVMVPGNARLRHQVVEERRQKLLEYAEITPLNRIEEGTGDVGFITSGISYQY
VKEAFPGSPVLKLGLTWPLPEKLILKFAEKVKTIIVVEELEPYIEEHVRALGLKVVGKEIIPRTGELNHYIVQKAVLKYL
GEDIADFLENLDLPQRPPVMCPGCPHRPVFYILSELKLTVTGDIGCYTLGVMPPLGAIDTTVCMGAGIGMALGMEKANPD
FSGKTVAVIGDSTFLHSGITPLIDMVYNGGKGTILILDNRTTAMTGHQPHPATGKTLMGEPAPQVDFEALARALGVKRVT
TVDPFDLQQLRAVITEEVAAGEVSVVVVRRECALLPNQTREPLTVISEKCTGCQRCLKLGCPAIAIKDKKASIDPLLCNG
CGVCAQVCKFSAIIKGGDSLG

Sequences:

>Translated_581_residues
MARLMTGNEAIARGAFEAGVKIGVGYPGTPSTEILENFARYPGVYAQWSPNEKVALEVGIGASLAGARTLVTMKHVGVNV
AADSLLTLSYTGVNAGLVLVSADDPGLHSSQNEQDNRYYGKLAKIPVLEPSDSEEARKFVKLAYELSEEFDTPVILRTTT
RIAHTHTLVIEEEPREVSLKPYVKNPQKYVMVPGNARLRHQVVEERRQKLLEYAEITPLNRIEEGTGDVGFITSGISYQY
VKEAFPGSPVLKLGLTWPLPEKLILKFAEKVKTIIVVEELEPYIEEHVRALGLKVVGKEIIPRTGELNHYIVQKAVLKYL
GEDIADFLENLDLPQRPPVMCPGCPHRPVFYILSELKLTVTGDIGCYTLGVMPPLGAIDTTVCMGAGIGMALGMEKANPD
FSGKTVAVIGDSTFLHSGITPLIDMVYNGGKGTILILDNRTTAMTGHQPHPATGKTLMGEPAPQVDFEALARALGVKRVT
TVDPFDLQQLRAVITEEVAAGEVSVVVVRRECALLPNQTREPLTVISEKCTGCQRCLKLGCPAIAIKDKKASIDPLLCNG
CGVCAQVCKFSAIIKGGDSLG
>Mature_580_residues
ARLMTGNEAIARGAFEAGVKIGVGYPGTPSTEILENFARYPGVYAQWSPNEKVALEVGIGASLAGARTLVTMKHVGVNVA
ADSLLTLSYTGVNAGLVLVSADDPGLHSSQNEQDNRYYGKLAKIPVLEPSDSEEARKFVKLAYELSEEFDTPVILRTTTR
IAHTHTLVIEEEPREVSLKPYVKNPQKYVMVPGNARLRHQVVEERRQKLLEYAEITPLNRIEEGTGDVGFITSGISYQYV
KEAFPGSPVLKLGLTWPLPEKLILKFAEKVKTIIVVEELEPYIEEHVRALGLKVVGKEIIPRTGELNHYIVQKAVLKYLG
EDIADFLENLDLPQRPPVMCPGCPHRPVFYILSELKLTVTGDIGCYTLGVMPPLGAIDTTVCMGAGIGMALGMEKANPDF
SGKTVAVIGDSTFLHSGITPLIDMVYNGGKGTILILDNRTTAMTGHQPHPATGKTLMGEPAPQVDFEALARALGVKRVTT
VDPFDLQQLRAVITEEVAAGEVSVVVVRRECALLPNQTREPLTVISEKCTGCQRCLKLGCPAIAIKDKKASIDPLLCNGC
GVCAQVCKFSAIIKGGDSLG

Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]

COG id: COG4231

COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017721
- InterPro:   IPR002880
- InterPro:   IPR011766
- InterPro:   IPR009014
- InterPro:   IPR015941 [H]

Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.8 [H]

Molecular weight: Translated: 62896; Mature: 62765

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLMTGNEAIARGAFEAGVKIGVGYPGTPSTEILENFARYPGVYAQWSPNEKVALEVGI
CCEEECCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEECC
GASLAGARTLVTMKHVGVNVAADSLLTLSYTGVNAGLVLVSADDPGLHSSQNEQDNRYYG
CCCCCCCHHEEEHHHCCCEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHH
KLAKIPVLEPSDSEEARKFVKLAYELSEEFDTPVILRTTTRIAHTHTLVIEEEPREVSLK
HHEECEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEECCCCCEECC
PYVKNPQKYVMVPGNARLRHQVVEERRQKLLEYAEITPLNRIEEGTGDVGFITSGISYQY
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCHHH
VKEAFPGSPVLKLGLTWPLPEKLILKFAEKVKTIIVVEELEPYIEEHVRALGLKVVGKEI
HHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHH
IPRTGELNHYIVQKAVLKYLGEDIADFLENLDLPQRPPVMCPGCPHRPVFYILSELKLTV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCEEEE
TGDIGCYTLGVMPPLGAIDTTVCMGAGIGMALGMEKANPDFSGKTVAVIGDSTFLHSGIT
ECCCCEEEEECCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEECCHHHHCCHH
PLIDMVYNGGKGTILILDNRTTAMTGHQPHPATGKTLMGEPAPQVDFEALARALGVKRVT
HHHHHHCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEE
TVDPFDLQQLRAVITEEVAAGEVSVVVVRRECALLPNQTREPLTVISEKCTGCQRCLKLG
CCCCCCHHHHHHHHHHHHCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
CPAIAIKDKKASIDPLLCNGCGVCAQVCKFSAIIKGGDSLG
CCEEEEECCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARLMTGNEAIARGAFEAGVKIGVGYPGTPSTEILENFARYPGVYAQWSPNEKVALEVGI
CEEECCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEECC
GASLAGARTLVTMKHVGVNVAADSLLTLSYTGVNAGLVLVSADDPGLHSSQNEQDNRYYG
CCCCCCCHHEEEHHHCCCEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHH
KLAKIPVLEPSDSEEARKFVKLAYELSEEFDTPVILRTTTRIAHTHTLVIEEEPREVSLK
HHEECEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEECCCCCEECC
PYVKNPQKYVMVPGNARLRHQVVEERRQKLLEYAEITPLNRIEEGTGDVGFITSGISYQY
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCHHH
VKEAFPGSPVLKLGLTWPLPEKLILKFAEKVKTIIVVEELEPYIEEHVRALGLKVVGKEI
HHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHH
IPRTGELNHYIVQKAVLKYLGEDIADFLENLDLPQRPPVMCPGCPHRPVFYILSELKLTV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCEEEE
TGDIGCYTLGVMPPLGAIDTTVCMGAGIGMALGMEKANPDFSGKTVAVIGDSTFLHSGIT
ECCCCEEEEECCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEECCHHHHCCHH
PLIDMVYNGGKGTILILDNRTTAMTGHQPHPATGKTLMGEPAPQVDFEALARALGVKRVT
HHHHHHCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEE
TVDPFDLQQLRAVITEEVAAGEVSVVVVRRECALLPNQTREPLTVISEKCTGCQRCLKLG
CCCCCCHHHHHHHHHHHHCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
CPAIAIKDKKASIDPLLCNGCGVCAQVCKFSAIIKGGDSLG
CCEEEEECCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]