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The map label for this gene is ziaR [H]

Identifier: 78043827

GI number: 78043827

Start: 762097

End: 762456

Strand: Direct

Name: ziaR [H]

Synonym: CHY_0859

Alternate gene names: 78043827

Gene position: 762097-762456 (Clockwise)

Preceding gene: 78044579

Following gene: 78044655

Centisome position: 31.73

GC content: 41.11

Gene sequence:

>360_bases
GTGAAAGAAAAGGCTCCGGTGTGTAAGGTTACTTTATTTGATGAAGAAACGGTCCAGACAATTCGCCAAAACTTACCCGG
TGAAGAGACAATTATCGAGCTTTCCGAGGTGTACAAATCCCTGGGAGATGGAACCAGGCTCAAGATTTTGCTGGCCTTAA
AAGAAAAAGAAAGTTGTGTTTGTGATTTAGCCGCTGCCCTTTCCATGAGCCAGTCGGCTATTTCCCATCAATTACGGGTT
TTGCGGAATGTGCGCTTGGTGAAATACCGAAGAGAAGGGAAAATGGTTTACTACAGTTTGGATGATGAACATATTTTAAA
AATTTTACAGGAAGGTTTAAACCATATTACCCATAAATAG

Upstream 100 bases:

>100_bases
AATTATATCTTTTTTTGGCCGGTTACAACACTGCTACTTGGCAAAAAGATAGGAAAAATATATAATAATATATGAACAAA
TGAACATATGAGGTGATAAA

Downstream 100 bases:

>100_bases
GTTGGTGAAATTATGGCAAAAAATAGTATTTTTTACCTTACCGGATGCAGCTGACAGAGCTGTGCAGCCGTTCTGGAAGA
ACGGGTGAAAAAGCTTCCCG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKEKAPVCKVTLFDEETVQTIRQNLPGEETIIELSEVYKSLGDGTRLKILLALKEKESCVCDLAAALSMSQSAISHQLRV
LRNVRLVKYRREGKMVYYSLDDEHILKILQEGLNHITHK

Sequences:

>Translated_119_residues
MKEKAPVCKVTLFDEETVQTIRQNLPGEETIIELSEVYKSLGDGTRLKILLALKEKESCVCDLAAALSMSQSAISHQLRV
LRNVRLVKYRREGKMVYYSLDDEHILKILQEGLNHITHK
>Mature_119_residues
MKEKAPVCKVTLFDEETVQTIRQNLPGEETIIELSEVYKSLGDGTRLKILLALKEKESCVCDLAAALSMSQSAISHQLRV
LRNVRLVKYRREGKMVYYSLDDEHILKILQEGLNHITHK

Specific function: Transcriptional repressor of the expression of the ziaA gene. Controls zinc homeostasis by triggering ziaA-mediated efflux of excess zinc into the periplasm [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR018334
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 13611; Mature: 13611

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS00846 HTH_ARSR_1 ; PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKAPVCKVTLFDEETVQTIRQNLPGEETIIELSEVYKSLGDGTRLKILLALKEKESCV
CCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHH
CDLAAALSMSQSAISHQLRVLRNVRLVKYRREGKMVYYSLDDEHILKILQEGLNHITHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEKAPVCKVTLFDEETVQTIRQNLPGEETIIELSEVYKSLGDGTRLKILLALKEKESCV
CCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHH
CDLAAALSMSQSAISHQLRVLRNVRLVKYRREGKMVYYSLDDEHILKILQEGLNHITHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9724772 [H]