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The map label for this gene is 78043638

Identifier: 78043638

GI number: 78043638

Start: 718327

End: 719625

Strand: Direct

Name: 78043638

Synonym: CHY_0811

Alternate gene names: NA

Gene position: 718327-719625 (Clockwise)

Preceding gene: 78043483

Following gene: 78044444

Centisome position: 29.91

GC content: 59.28

Gene sequence:

>1299_bases
ATGAAACGCACCAACGTCGTCCGGGTTCTTCCAGATAAACTGCAGAAGCAAGTTCTGGAGACCATTGGGGACCGCTGTGC
TGCCCTCTGGAACGCCGTCCAGTACAGGTGCAGGCAAGCGTTCTTCAAGGGAGAATCTGTGCCCTCCTATGCCGCCTTAT
GCTCCGAGTTCAAGGAGCACCCAGCATATAAAGCCCTGCCCGCTCACATGGGGCAGGAGATCATCAAAAAAGCAAGGAAG
GCGTGGGACTCCTACTTTGCCTGCCTGCGGTTGTACCGGAAAGGCGAACTGGAGAAGCCGCCGCACATACCCCGCTACTG
GAAGGACCGCCGCACGGGAAAGCGCATATTCCGCGTCATTCCCGTCAAGGCACCTACGTCCTACTCCCTGGATGCTCGTT
ATCTCTCCCTCACACTGCCGCAGGACCTCCGGAAGGGGCGGGGAGATCGCTTGGTCCTGCGCACGAAGGGTGTCCTGCGC
TTCCACGGCAGACCTAAAACCCTGGAGCTTAAATATGACCCGGTAAAAATCCGCTGGTATGCCCATCAGGTAGTGGAGGT
GCCGGAGCCAGCAAGAAAAGCCCGGCCCGAAAAGCATGCCGCCATCGACCTGGGTGTGAGGGTCCTGGTCGCCTTAGCCG
TCGAAGGACTCAACCGCCAATTCCTTTTCTCCGCCCGCGAAGTCATCAAGGACTTCCTCTACTGGACCAATCAGATTGCA
GGGGAGCAGTCGAGGCTCAACCGGGCAGGAAGGAAGACCTCCAGGAGGCTGAAGAGGCTTTATCAGCTCCGTGCCCGCAG
GCTCAGGCACGCCTTTGTTGCTTTGGCTGCAAAAATTGTCCGCATTCTTAAACGGCTTCGTGTAACCACGCTATTTCTCG
AAGACCTGAGAGGCATTCGGGAGACCATGGACTTCGGGCCGAAGAACCTTCTGGTGCACAACTTCTGGGCCTTCCGCATG
TTGAGGAACCTTATCGAAGCTGCCTGCACTCGGACCGGGATAAGGGTAGTGCCGATGGAGCCGCGAGGGACCTCTTCCCG
GTGTGCCGTCTGCGGTTCTTCTGTCAGGCGACCTGTGCGGCATAAAGCGGTGTGCGAGAAATGCGGTCGCGTCTGGCACG
CCGATGCCAACGCGGCATTAAACATAATCCTTCAGGGCTCCTCGAAGGAGCACGGGGCGGAGGCTACGCCCTTAAAGCCG
CTTGCCTTCCGGTGGAACCGCCACCGGTGGGTAAGCCGCTTCGAATCTGCCGCCGGTACGCCCTCTGGGGCGACGAGCGG
CAGCCGGATGGCGGCGTAA

Upstream 100 bases:

>100_bases
TTCGACAAAAAGATAAATTTACCAAGAAAATCCGCTGCTGAAGGGCCCGACTTTTAAGTCTGGGAATGAAAGCGGCTTTA
GATTTTGCTATAATGGAAGC

Downstream 100 bases:

>100_bases
GCCGCCTGAAGGAATCCCCGGGCTTTAGCCCTGGGGTGGAAGTCAACTTGTGGTAAAATAAAAATATCTGGATTGATTGA
GCTTGCCGACCAGCGACTTT

Product: ISChy8, transposase

Products: NA

Alternate protein names: IS Element ISTsi3 OrfB Probably Transposase; Transposase ISC; Neutral Protease; Transposase IS; Transposase And Inactivated Derivatives; Transport-Associated OB Domain Protein; ISChy8 Transposase; IS Element ISDka2 OrfB; IS Element ISTsi2 OrfB Probably Transposase

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKRTNVVRVLPDKLQKQVLETIGDRCAALWNAVQYRCRQAFFKGESVPSYAALCSEFKEHPAYKALPAHMGQEIIKKARK
AWDSYFACLRLYRKGELEKPPHIPRYWKDRRTGKRIFRVIPVKAPTSYSLDARYLSLTLPQDLRKGRGDRLVLRTKGVLR
FHGRPKTLELKYDPVKIRWYAHQVVEVPEPARKARPEKHAAIDLGVRVLVALAVEGLNRQFLFSAREVIKDFLYWTNQIA
GEQSRLNRAGRKTSRRLKRLYQLRARRLRHAFVALAAKIVRILKRLRVTTLFLEDLRGIRETMDFGPKNLLVHNFWAFRM
LRNLIEAACTRTGIRVVPMEPRGTSSRCAVCGSSVRRPVRHKAVCEKCGRVWHADANAALNIILQGSSKEHGAEATPLKP
LAFRWNRHRWVSRFESAAGTPSGATSGSRMAA

Sequences:

>Translated_432_residues
MKRTNVVRVLPDKLQKQVLETIGDRCAALWNAVQYRCRQAFFKGESVPSYAALCSEFKEHPAYKALPAHMGQEIIKKARK
AWDSYFACLRLYRKGELEKPPHIPRYWKDRRTGKRIFRVIPVKAPTSYSLDARYLSLTLPQDLRKGRGDRLVLRTKGVLR
FHGRPKTLELKYDPVKIRWYAHQVVEVPEPARKARPEKHAAIDLGVRVLVALAVEGLNRQFLFSAREVIKDFLYWTNQIA
GEQSRLNRAGRKTSRRLKRLYQLRARRLRHAFVALAAKIVRILKRLRVTTLFLEDLRGIRETMDFGPKNLLVHNFWAFRM
LRNLIEAACTRTGIRVVPMEPRGTSSRCAVCGSSVRRPVRHKAVCEKCGRVWHADANAALNIILQGSSKEHGAEATPLKP
LAFRWNRHRWVSRFESAAGTPSGATSGSRMAA
>Mature_432_residues
MKRTNVVRVLPDKLQKQVLETIGDRCAALWNAVQYRCRQAFFKGESVPSYAALCSEFKEHPAYKALPAHMGQEIIKKARK
AWDSYFACLRLYRKGELEKPPHIPRYWKDRRTGKRIFRVIPVKAPTSYSLDARYLSLTLPQDLRKGRGDRLVLRTKGVLR
FHGRPKTLELKYDPVKIRWYAHQVVEVPEPARKARPEKHAAIDLGVRVLVALAVEGLNRQFLFSAREVIKDFLYWTNQIA
GEQSRLNRAGRKTSRRLKRLYQLRARRLRHAFVALAAKIVRILKRLRVTTLFLEDLRGIRETMDFGPKNLLVHNFWAFRM
LRNLIEAACTRTGIRVVPMEPRGTSSRCAVCGSSVRRPVRHKAVCEKCGRVWHADANAALNIILQGSSKEHGAEATPLKP
LAFRWNRHRWVSRFESAAGTPSGATSGSRMAA

Specific function: Unknown

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49618; Mature: 49618

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTNVVRVLPDKLQKQVLETIGDRCAALWNAVQYRCRQAFFKGESVPSYAALCSEFKEH
CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
PAYKALPAHMGQEIIKKARKAWDSYFACLRLYRKGELEKPPHIPRYWKDRRTGKRIFRVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEE
PVKAPTSYSLDARYLSLTLPQDLRKGRGDRLVLRTKGVLRFHGRPKTLELKYDPVKIRWY
ECCCCCCCCCCCEEEEEECCHHHHCCCCCEEEEEECCEEEECCCCCEEEEEECCEEEEEE
AHQVVEVPEPARKARPEKHAAIDLGVRVLVALAVEGLNRQFLFSAREVIKDFLYWTNQIA
HHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
GEQSRLNRAGRKTSRRLKRLYQLRARRLRHAFVALAAKIVRILKRLRVTTLFLEDLRGIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETMDFGPKNLLVHNFWAFRMLRNLIEAACTRTGIRVVPMEPRGTSSRCAVCGSSVRRPVR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHCCHHHHHHHH
HKAVCEKCGRVWHADANAALNIILQGSSKEHGAEATPLKPLAFRWNRHRWVSRFESAAGT
HHHHHHHHCCEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PSGATSGSRMAA
CCCCCCCCCCCC
>Mature Secondary Structure
MKRTNVVRVLPDKLQKQVLETIGDRCAALWNAVQYRCRQAFFKGESVPSYAALCSEFKEH
CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
PAYKALPAHMGQEIIKKARKAWDSYFACLRLYRKGELEKPPHIPRYWKDRRTGKRIFRVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEE
PVKAPTSYSLDARYLSLTLPQDLRKGRGDRLVLRTKGVLRFHGRPKTLELKYDPVKIRWY
ECCCCCCCCCCCEEEEEECCHHHHCCCCCEEEEEECCEEEECCCCCEEEEEECCEEEEEE
AHQVVEVPEPARKARPEKHAAIDLGVRVLVALAVEGLNRQFLFSAREVIKDFLYWTNQIA
HHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
GEQSRLNRAGRKTSRRLKRLYQLRARRLRHAFVALAAKIVRILKRLRVTTLFLEDLRGIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETMDFGPKNLLVHNFWAFRMLRNLIEAACTRTGIRVVPMEPRGTSSRCAVCGSSVRRPVR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHCCHHHHHHHH
HKAVCEKCGRVWHADANAALNIILQGSSKEHGAEATPLKPLAFRWNRHRWVSRFESAAGT
HHHHHHHHCCEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PSGATSGSRMAA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA