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The map label for this gene is yiaM [C]

Identifier: 78043624

GI number: 78043624

Start: 1160322

End: 1160825

Strand: Direct

Name: yiaM [C]

Synonym: CHY_1302

Alternate gene names: 78043624

Gene position: 1160322-1160825 (Clockwise)

Preceding gene: 78043354

Following gene: 78043046

Centisome position: 48.32

GC content: 37.3

Gene sequence:

>504_bases
ATGACAAAGTACATGAGTTTCTTAAAAAAACTTGATCGAATTTTGGAATTTATTGAACAAAATCTTGTTGCTATTTTACT
AATGATAATGACGGCGGTAGTATTTTGGGGGGTAATAACCCGTTTTGTTTTAAAAGATGCATCATCGTGGGCAGATGAAG
CCTCAAGATATTTAAATATTTGGGCGATTTATGTGGGAGCGAGCCTTGCTGCAAAAAGAGGGGCTCATATTGGGGTTGAT
GCTTTTGTGCATTTTTTACCCAAGCAAGCTCAACGTTTTGCTGCCATACTAGCAGCAGCTATTAATTTAATTTTCAGCTT
CGCAATTGCTTATGTGGGCTATAGTTATACAATGGACATCGTAAAAACAGGTCAACTTTCCCCGGCCATGCGGATACCAA
TGGCATGGGCATATTTTGCAGTTCCATTTGGGCTTACCTTAATGGGCATTCGTTATCTTATGATTTTAATTGAAAATATT
ACCGGAAAAAGTATATTAAGCTAA

Upstream 100 bases:

>100_bases
CAATTTATAGAAGGGCCAAATGCTCTCTTCAAAATGATAAGTAATGATGTAAATAGGTAAAAAATAATAAAACAAAGTAT
GTTAAATTTGGACAAGGAGG

Downstream 100 bases:

>100_bases
GTTATGTAGGAGGTAGATACCTAATGGCAAATATCTTGTTTACATTATTTATAATATTTGTGGTTTTGAATGTTCCAATA
GGTATTGCAATTGGATTGTC

Product: TRAP dicarboxylate transporter subunit DctQ

Products: NA

Alternate protein names: C4-Dicarboxylate Transport System Permease Small Protein; C4-Dicarboxylate Transport System; TRAP Transporter Small Transmembrane Protein TeaB; C4-Dicarboxylate Transport System Small Permease; TRAP Dicarboxylate Transporter Subunit DctQ; C4-Dicarboxylate Transport System Small Permease Protein; TRAP Dicarboxylate Transporter; TRAP-Type C4-Dicarboxylate Transporter Small Permease; Sialic Acid TRAP Transporter Permease SiaT; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MTKYMSFLKKLDRILEFIEQNLVAILLMIMTAVVFWGVITRFVLKDASSWADEASRYLNIWAIYVGASLAAKRGAHIGVD
AFVHFLPKQAQRFAAILAAAINLIFSFAIAYVGYSYTMDIVKTGQLSPAMRIPMAWAYFAVPFGLTLMGIRYLMILIENI
TGKSILS

Sequences:

>Translated_167_residues
MTKYMSFLKKLDRILEFIEQNLVAILLMIMTAVVFWGVITRFVLKDASSWADEASRYLNIWAIYVGASLAAKRGAHIGVD
AFVHFLPKQAQRFAAILAAAINLIFSFAIAYVGYSYTMDIVKTGQLSPAMRIPMAWAYFAVPFGLTLMGIRYLMILIENI
TGKSILS
>Mature_166_residues
TKYMSFLKKLDRILEFIEQNLVAILLMIMTAVVFWGVITRFVLKDASSWADEASRYLNIWAIYVGASLAAKRGAHIGVDA
FVHFLPKQAQRFAAILAAAINLIFSFAIAYVGYSYTMDIVKTGQLSPAMRIPMAWAYFAVPFGLTLMGIRYLMILIENIT
GKSILS

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18715; Mature: 18583

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYMSFLKKLDRILEFIEQNLVAILLMIMTAVVFWGVITRFVLKDASSWADEASRYLNI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAIYVGASLAAKRGAHIGVDAFVHFLPKQAQRFAAILAAAINLIFSFAIAYVGYSYTMDI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKTGQLSPAMRIPMAWAYFAVPFGLTLMGIRYLMILIENITGKSILS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
TKYMSFLKKLDRILEFIEQNLVAILLMIMTAVVFWGVITRFVLKDASSWADEASRYLNI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAIYVGASLAAKRGAHIGVDAFVHFLPKQAQRFAAILAAAINLIFSFAIAYVGYSYTMDI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKTGQLSPAMRIPMAWAYFAVPFGLTLMGIRYLMILIENITGKSILS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA