| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043569
Identifier: 78043569
GI number: 78043569
Start: 1517163
End: 1517810
Strand: Direct
Name: 78043569
Synonym: CHY_1701
Alternate gene names: NA
Gene position: 1517163-1517810 (Clockwise)
Preceding gene: 78044317
Following gene: 78045014
Centisome position: 63.18
GC content: 27.78
Gene sequence:
>648_bases ATGAAATGGACTAAAGTCCCCCCATCAGCAAATAGTAAGTACTTCAAAGCATACGAAAAATTAGTTGACTTATATTTCGA ATATAATTCAAAAAATATAATGTTTTTTAGAACCTTAATAGTTAATAAAAACGATTATGATTTTACTCATGAAAAATTTT ATAAAGGTGATTACGAGGAAGGTTTTTATAACCTCTATTGCCAACTAATATTAAACTGGCTTCAAAAATCAAACGAATAT CACATCCGAATAGCTCATCGACCTATAAAAAAAGCTTCTAGAGATGATTGTGAAGAGTTTAGACTTAATTGGTTAAAAGA AAAACTTAATAATAAGTTTGAAAGTACAATAAATAAATATTCATGGTTTTTCGGTTATCAAAAAGTAAAGCCTCCAGTAA TAACTATAGAAAGTAGAGAAGCAAGAGAAAGGAGACTTATACAAATAGCCGATATATTAATGGGAGCAGTTGGCTTCTAT TGGAATAAAGAACATTTGAAAAGTAACGTCAGAAATGGTAAACTCACACTCGCAAAATACATTGCATCAAAATTAGGAAG AAATGATTTATTGTTTACTACTAAATGGAATGATAAAAGATTTAACATCTTTCTTTTTGATACATCAAAAACCAAGTTAA AAAAATAA
Upstream 100 bases:
>100_bases TGGTGGAATATGGATATTAAAAGAAAAAGGATGGAATTTTGTAAACGATTTCGAAAAGTTTTGCCAAAATGTTTTAGGCT TAAAAAATCCTATGGGGCAC
Downstream 100 bases:
>100_bases ATTAGGCGTCCCTGGGCTAACTGTGTCATAATTCACAGTTATATCTCCGCAGGTGACGCCATTATTCTCAATTTATTTTG GAGGCTATGGGGACCATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKWTKVPPSANSKYFKAYEKLVDLYFEYNSKNIMFFRTLIVNKNDYDFTHEKFYKGDYEEGFYNLYCQLILNWLQKSNEY HIRIAHRPIKKASRDDCEEFRLNWLKEKLNNKFESTINKYSWFFGYQKVKPPVITIESREARERRLIQIADILMGAVGFY WNKEHLKSNVRNGKLTLAKYIASKLGRNDLLFTTKWNDKRFNIFLFDTSKTKLKK
Sequences:
>Translated_215_residues MKWTKVPPSANSKYFKAYEKLVDLYFEYNSKNIMFFRTLIVNKNDYDFTHEKFYKGDYEEGFYNLYCQLILNWLQKSNEY HIRIAHRPIKKASRDDCEEFRLNWLKEKLNNKFESTINKYSWFFGYQKVKPPVITIESREARERRLIQIADILMGAVGFY WNKEHLKSNVRNGKLTLAKYIASKLGRNDLLFTTKWNDKRFNIFLFDTSKTKLKK >Mature_215_residues MKWTKVPPSANSKYFKAYEKLVDLYFEYNSKNIMFFRTLIVNKNDYDFTHEKFYKGDYEEGFYNLYCQLILNWLQKSNEY HIRIAHRPIKKASRDDCEEFRLNWLKEKLNNKFESTINKYSWFFGYQKVKPPVITIESREARERRLIQIADILMGAVGFY WNKEHLKSNVRNGKLTLAKYIASKLGRNDLLFTTKWNDKRFNIFLFDTSKTKLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26074; Mature: 26074
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWTKVPPSANSKYFKAYEKLVDLYFEYNSKNIMFFRTLIVNKNDYDFTHEKFYKGDYEE CCCCCCCCCCCHHHHHHHHHHHHHHHEECCCEEEEEEEEEECCCCCCCCHHHHHCCCCCH GFYNLYCQLILNWLQKSNEYHIRIAHRPIKKASRDDCEEFRLNWLKEKLNNKFESTINKY HHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SWFFGYQKVKPPVITIESREARERRLIQIADILMGAVGFYWNKEHLKSNVRNGKLTLAKY HHHHCHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHH IASKLGRNDLLFTTKWNDKRFNIFLFDTSKTKLKK HHHHCCCCCEEEEEECCCCEEEEEEEECCHHHCCC >Mature Secondary Structure MKWTKVPPSANSKYFKAYEKLVDLYFEYNSKNIMFFRTLIVNKNDYDFTHEKFYKGDYEE CCCCCCCCCCCHHHHHHHHHHHHHHHEECCCEEEEEEEEEECCCCCCCCHHHHHCCCCCH GFYNLYCQLILNWLQKSNEYHIRIAHRPIKKASRDDCEEFRLNWLKEKLNNKFESTINKY HHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SWFFGYQKVKPPVITIESREARERRLIQIADILMGAVGFYWNKEHLKSNVRNGKLTLAKY HHHHCHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHH IASKLGRNDLLFTTKWNDKRFNIFLFDTSKTKLKK HHHHCCCCCEEEEEECCCCEEEEEEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA