| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is dut [H]
Identifier: 78043524
GI number: 78043524
Start: 263865
End: 264305
Strand: Direct
Name: dut [H]
Synonym: CHY_0300
Alternate gene names: 78043524
Gene position: 263865-264305 (Clockwise)
Preceding gene: 78043735
Following gene: 78043927
Centisome position: 10.99
GC content: 46.71
Gene sequence:
>441_bases ATGCGCGGATTTAAGGTTGTAAGTTTTTTTGAGGACAAAGGAATTAACATCCCACAGCGAAAGACCAAAGCCAGTGCCGG TTATGATTTGGAAGCAGCGATTGACGTGGTTTTAAACCCGGGTGAGGTAAAACTGGTACCTACCGGTGTTAAAGCTTATA TGCCCGAAGATGAGGTACTCCTCATTTACATTAGAAGTAGCCTTGCGGTGAAAAAAGGTTTGCTTTTGGCCAACGGCGTA GGGGTAGTAGATGCGGATTATTACGATAACCCGGAAAACGAAGGGCATATCATGATACCTTTGTTTAACCCCGGAAAAGA ACCGGTAACGATCAGGAAAGGGGAGCGGATAGCCCAGGGGATTTTTACCAGATATTTAAAGGCCGATGATGACGAGGCTC TGGGCCAAAGAACGGGCGGGTTTGGTTCTACCGGTCAGTAA
Upstream 100 bases:
>100_bases TTTAAAATTCCTAATTTACAATTAAAAAGTTTTTTTAAAAACGAAAGGCCTTTATAATAATAAAAAGGGAGAAACTAAAC AGGTGAATATGGAGGAGAAT
Downstream 100 bases:
>100_bases AAAATAACAGTAAAATTTCTTTATTAACAACTTGCCTTCAAACGAAAAATGTGTATAATAGTAAGAGCGAGGAATAAAGA AGTGCGCCCGTAGCTCAGCG
Product: deoxyuridine 5`-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MRGFKVVSFFEDKGINIPQRKTKASAGYDLEAAIDVVLNPGEVKLVPTGVKAYMPEDEVLLIYIRSSLAVKKGLLLANGV GVVDADYYDNPENEGHIMIPLFNPGKEPVTIRKGERIAQGIFTRYLKADDDEALGQRTGGFGSTGQ
Sequences:
>Translated_146_residues MRGFKVVSFFEDKGINIPQRKTKASAGYDLEAAIDVVLNPGEVKLVPTGVKAYMPEDEVLLIYIRSSLAVKKGLLLANGV GVVDADYYDNPENEGHIMIPLFNPGKEPVTIRKGERIAQGIFTRYLKADDDEALGQRTGGFGSTGQ >Mature_146_residues MRGFKVVSFFEDKGINIPQRKTKASAGYDLEAAIDVVLNPGEVKLVPTGVKAYMPEDEVLLIYIRSSLAVKKGLLLANGV GVVDADYYDNPENEGHIMIPLFNPGKEPVTIRKGERIAQGIFTRYLKADDDEALGQRTGGFGSTGQ
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=136, Percent_Identity=37.5, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI4503423, Length=136, Percent_Identity=37.5, Blast_Score=71, Evalue=3e-13, Organism=Homo sapiens, GI70906441, Length=136, Percent_Identity=37.5, Blast_Score=70, Evalue=8e-13, Organism=Escherichia coli, GI1790071, Length=138, Percent_Identity=37.6811594202899, Blast_Score=86, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6319729, Length=136, Percent_Identity=33.0882352941176, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 15902; Mature: 15902
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGFKVVSFFEDKGINIPQRKTKASAGYDLEAAIDVVLNPGEVKLVPTGVKAYMPEDEVL CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCEEECCCCCEE LIYIRSSLAVKKGLLLANGVGVVDADYYDNPENEGHIMIPLFNPGKEPVTIRKGERIAQG EEEEECCHHHHCCEEEECCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEEECCCHHHHH IFTRYLKADDDEALGQRTGGFGSTGQ HHHHHHCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure MRGFKVVSFFEDKGINIPQRKTKASAGYDLEAAIDVVLNPGEVKLVPTGVKAYMPEDEVL CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCEEECCCCCEE LIYIRSSLAVKKGLLLANGVGVVDADYYDNPENEGHIMIPLFNPGKEPVTIRKGERIAQG EEEEECCHHHHCCEEEECCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEEECCCHHHHH IFTRYLKADDDEALGQRTGGFGSTGQ HHHHHHCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]