| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78043498
Identifier: 78043498
GI number: 78043498
Start: 1200171
End: 1200878
Strand: Direct
Name: 78043498
Synonym: CHY_1341
Alternate gene names: NA
Gene position: 1200171-1200878 (Clockwise)
Preceding gene: 78045051
Following gene: 78043801
Centisome position: 49.98
GC content: 34.04
Gene sequence:
>708_bases ATGCCTTACAGTAAAATTGCCAACTTCTACGATCTTTTGTTAAGCGGAGTTCCCGGCGATTACTGGGTCCAATTAATTGA AGATTTACTAAAACGCTGGAATTATGAAGTGAAAAGTATTGCGGAATTAGGCTGTGGTACCGGTGTAATTTTAGAAAAGC TTTCCCAAAAAGGTTATAAATTATATGGAGTGGATATTAGCCCTGAAATGCTTGCCGTTGCCCACAACAAGAAAATAGGA AATACAAAATTATTTTGCCAAGATATCGTAAATTTAGAACTTCCGGAAAAAGTTGATCTAATCTTTGCTTTTCATGATTG CCTTAATTATATAAATACAACGGACGATTTATATCAGTGCTTTTCTCAAGTAAAAAATAACTTAAACGAACAGGGCTTAT TTTACTTTGACCTAAATCGTTTAGAATGGCTTTTGGATTTAGAAAATTTACCTGGCGAACTTCATTTAGATAACTTAGTA CTAAATTGGACCGGCAAATTTAACAATAATAAATTTTTTATTAAACTTAGAATTTATAACCAAAATACCGGTGAAGTTTC CTACGAGCAGCACGAGCTTTCCCTCTTTTCGCCGGAGGAAGTTTTAAAAATGCTTGCGGACTTAAATTTTTCGGTTTTAT CGGTAAACCATACACCTACCAGGAGTTTTTATTTAGCTGTAAAAGGAGGAAGTAGTAGTGAATGTTGA
Upstream 100 bases:
>100_bases TGGTACAAAATCTATTGAAGAAGTATTCGCTTCAATTAAAAATGCTCTCCAAAAGTAAACTCTCCCTTTTGGGGAGAGTT TTTTTAAAGGAAGGTAAAGT
Downstream 100 bases:
>100_bases TATAGCTTATATAGGTGGATCAAGTACCTTGGGAATAGGATTTCCGGAAAAGTTTCTACCCCCTGATGTTAAATTTATAA AAGAAGAAACTTTTACAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MPYSKIANFYDLLLSGVPGDYWVQLIEDLLKRWNYEVKSIAELGCGTGVILEKLSQKGYKLYGVDISPEMLAVAHNKKIG NTKLFCQDIVNLELPEKVDLIFAFHDCLNYINTTDDLYQCFSQVKNNLNEQGLFYFDLNRLEWLLDLENLPGELHLDNLV LNWTGKFNNNKFFIKLRIYNQNTGEVSYEQHELSLFSPEEVLKMLADLNFSVLSVNHTPTRSFYLAVKGGSSSEC
Sequences:
>Translated_235_residues MPYSKIANFYDLLLSGVPGDYWVQLIEDLLKRWNYEVKSIAELGCGTGVILEKLSQKGYKLYGVDISPEMLAVAHNKKIG NTKLFCQDIVNLELPEKVDLIFAFHDCLNYINTTDDLYQCFSQVKNNLNEQGLFYFDLNRLEWLLDLENLPGELHLDNLV LNWTGKFNNNKFFIKLRIYNQNTGEVSYEQHELSLFSPEEVLKMLADLNFSVLSVNHTPTRSFYLAVKGGSSSEC >Mature_234_residues PYSKIANFYDLLLSGVPGDYWVQLIEDLLKRWNYEVKSIAELGCGTGVILEKLSQKGYKLYGVDISPEMLAVAHNKKIGN TKLFCQDIVNLELPEKVDLIFAFHDCLNYINTTDDLYQCFSQVKNNLNEQGLFYFDLNRLEWLLDLENLPGELHLDNLVL NWTGKFNNNKFFIKLRIYNQNTGEVSYEQHELSLFSPEEVLKMLADLNFSVLSVNHTPTRSFYLAVKGGSSSEC
Specific function: May be a S-adenosyl-L-methionine (SAM)-dependent methyltransferase [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013217 [H]
Pfam domain/function: PF08242 Methyltransf_12 [H]
EC number: NA
Molecular weight: Translated: 27027; Mature: 26896
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYSKIANFYDLLLSGVPGDYWVQLIEDLLKRWNYEVKSIAELGCGTGVILEKLSQKGYK CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCE LYGVDISPEMLAVAHNKKIGNTKLFCQDIVNLELPEKVDLIFAFHDCLNYINTTDDLYQC EEEECCCCHHEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH FSQVKNNLNEQGLFYFDLNRLEWLLDLENLPGELHLDNLVLNWTGKFNNNKFFIKLRIYN HHHHHCCCCCCCEEEEEHHHHEEEEECCCCCCCEEECEEEEEEEEEECCCEEEEEEEEEE QNTGEVSYEQHELSLFSPEEVLKMLADLNFSVLSVNHTPTRSFYLAVKGGSSSEC CCCCCCEEECCEEEEECHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCC >Mature Secondary Structure PYSKIANFYDLLLSGVPGDYWVQLIEDLLKRWNYEVKSIAELGCGTGVILEKLSQKGYK CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCE LYGVDISPEMLAVAHNKKIGNTKLFCQDIVNLELPEKVDLIFAFHDCLNYINTTDDLYQC EEEECCCCHHEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH FSQVKNNLNEQGLFYFDLNRLEWLLDLENLPGELHLDNLVLNWTGKFNNNKFFIKLRIYN HHHHHCCCCCCCEEEEEHHHHEEEEECCCCCCCEEECEEEEEEEEEECCCEEEEEEEEEE QNTGEVSYEQHELSLFSPEEVLKMLADLNFSVLSVNHTPTRSFYLAVKGGSSSEC CCCCCCEEECCEEEEECHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA