| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is gpmI [H]
Identifier: 78042968
GI number: 78042968
Start: 249199
End: 250719
Strand: Direct
Name: gpmI [H]
Synonym: CHY_0283
Alternate gene names: 78042968
Gene position: 249199-250719 (Clockwise)
Preceding gene: 78044231
Following gene: 78042740
Centisome position: 10.38
GC content: 46.61
Gene sequence:
>1521_bases GTGTCTGTATTACTGACAATATTAGACGGCTGGGGTATAGCGGAAACTACCTATGGCAACAGTATAAAAGAGGCGGGAAC TCCCAATTTCAATCGGTACTGGGATAATTACCCCCATACAATTTTAGAGGCCTCGGGACTTGCGGTAGGTCTTCCCCGCG GGCAGATGGGCAATTCGGAAGTTGGCCACCTCAACATGGGAGCCGGAAGGATTGTTTACCAGGAATTAACCCGGATTACC AAAGAAATAGAGGAAGGCAGCTTTTTTCAAAATCGTGAGCTTTTAGAGGCTGTAAATCATGCTCAAAAAACCGGAGGCAA TCTCCACCTCATGGGGTTATTATCCGATGGTGGGGTGCATAGCCATATTGAACACCTCTTTGCTTTGTTAGAACTTTGCC GCCGGGAAAAATTTTCCCGGGTATTTATCCACCCCTTTCTCGATGGCCGGGATGTGCCGCCGCAAAACGCCCGGGAATAC ATAGAAGCTTTGGAAGCTCGGTTAAAGGAACTTGGCTTTGGCCAAATTGCCACGGTGATGGGGCGGTATTACGCTATGGA CCGGGATAAGCGCTGGGAGCGGACGGAAAAAGCTTACCGGGCGATGGTTTTTGGGGAAGGGTTTAAAGTAACAGAGCCGG AGGCGGCGGTGGCTTTAGCCTACGACCGGGGGGAAACCGATGAATTTGTTTCTCCTACGGTGGTTTTGACTTCCGAAGGT CAGCCCCGGGGAGTAGTTAAAGAAGGAGATAGCATCATCTTTTTCAATTTCCGTCCCGACCGGGCCCGGCAGATAACAAG AGCTTTTGTGGACGACGACTTTACCGGCTTTAACCGGAAAAAGATAGAAAATCTACATTTTGTTTGTTTTACTCAATACG ATAAAACGATAAAAGCTCCAGTAGCTTTTTTACCCCAGACGATTGAAAATTGCTTGGGCGAATATCTTTCCAAAAAACAA AAAAAGCAGCTTAGAATTGCCGAAACGGAAAAATACGCTCATGTGACCTTTTTCTTTAACGGTGGCGTCGAAAAACCCTA TCCTGGGGAAGAAAGAATATTAATTCCTTCGCCGAAAGTTGCAACTTACGATTTAAAACCGGAAATGAGTGCTTATGAAG TCACGGAAAAGCTTTTAGAGGAAATGGAAAAGGGTTACGATTTAATTGTTTTAAATTACGCCAATCCCGATATGGTTGGC CATACCGGGGTGTTTGAAGCGGCCGTCCGGGCCATAAAAGCGGTGGACGAATGCCTGGGACGGGTGGTAGATAAGTTTTT ATCTTTAGGAGGAACGGCCATAATTACCGCTGACCACGGCAACGCCGAGAAAATGCTTGAAGAAGATGGCAGCCCGCATA CCGCGCATACCACAAATCCAGTCCCCTTTATTCTGGTGGGGGAAAAATACCGTGGAATTAAGTTAAAGGAAAAGGGAAGT CTGGCTAATGTGGCCCCGACGATTTTAAAAATTTTAGAGCTGGAAATACCCGAGGAAATGACCAGTGAGCCTTTATTTTA A
Upstream 100 bases:
>100_bases TGCCAAACCGGATATCGACGGTGCCTTAGTAGGCGGTGCCAGCTTAAAAGTAGAAAGCTTTACCGCAATAGTTAAAGGCA GTATTTAAGGAGGACTTAAA
Downstream 100 bases:
>100_bases ATTTTATGAAGGAGGGTTATTTTGATGAGCGAAATTCGGGAAGTTATCGCCCGGGAAATTTTAGACTCCCGGGGAAATCC TACTGTTGAGGTAGATGTGA
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MSVLLTILDGWGIAETTYGNSIKEAGTPNFNRYWDNYPHTILEASGLAVGLPRGQMGNSEVGHLNMGAGRIVYQELTRIT KEIEEGSFFQNRELLEAVNHAQKTGGNLHLMGLLSDGGVHSHIEHLFALLELCRREKFSRVFIHPFLDGRDVPPQNAREY IEALEARLKELGFGQIATVMGRYYAMDRDKRWERTEKAYRAMVFGEGFKVTEPEAAVALAYDRGETDEFVSPTVVLTSEG QPRGVVKEGDSIIFFNFRPDRARQITRAFVDDDFTGFNRKKIENLHFVCFTQYDKTIKAPVAFLPQTIENCLGEYLSKKQ KKQLRIAETEKYAHVTFFFNGGVEKPYPGEERILIPSPKVATYDLKPEMSAYEVTEKLLEEMEKGYDLIVLNYANPDMVG HTGVFEAAVRAIKAVDECLGRVVDKFLSLGGTAIITADHGNAEKMLEEDGSPHTAHTTNPVPFILVGEKYRGIKLKEKGS LANVAPTILKILELEIPEEMTSEPLF
Sequences:
>Translated_506_residues MSVLLTILDGWGIAETTYGNSIKEAGTPNFNRYWDNYPHTILEASGLAVGLPRGQMGNSEVGHLNMGAGRIVYQELTRIT KEIEEGSFFQNRELLEAVNHAQKTGGNLHLMGLLSDGGVHSHIEHLFALLELCRREKFSRVFIHPFLDGRDVPPQNAREY IEALEARLKELGFGQIATVMGRYYAMDRDKRWERTEKAYRAMVFGEGFKVTEPEAAVALAYDRGETDEFVSPTVVLTSEG QPRGVVKEGDSIIFFNFRPDRARQITRAFVDDDFTGFNRKKIENLHFVCFTQYDKTIKAPVAFLPQTIENCLGEYLSKKQ KKQLRIAETEKYAHVTFFFNGGVEKPYPGEERILIPSPKVATYDLKPEMSAYEVTEKLLEEMEKGYDLIVLNYANPDMVG HTGVFEAAVRAIKAVDECLGRVVDKFLSLGGTAIITADHGNAEKMLEEDGSPHTAHTTNPVPFILVGEKYRGIKLKEKGS LANVAPTILKILELEIPEEMTSEPLF >Mature_505_residues SVLLTILDGWGIAETTYGNSIKEAGTPNFNRYWDNYPHTILEASGLAVGLPRGQMGNSEVGHLNMGAGRIVYQELTRITK EIEEGSFFQNRELLEAVNHAQKTGGNLHLMGLLSDGGVHSHIEHLFALLELCRREKFSRVFIHPFLDGRDVPPQNAREYI EALEARLKELGFGQIATVMGRYYAMDRDKRWERTEKAYRAMVFGEGFKVTEPEAAVALAYDRGETDEFVSPTVVLTSEGQ PRGVVKEGDSIIFFNFRPDRARQITRAFVDDDFTGFNRKKIENLHFVCFTQYDKTIKAPVAFLPQTIENCLGEYLSKKQK KQLRIAETEKYAHVTFFFNGGVEKPYPGEERILIPSPKVATYDLKPEMSAYEVTEKLLEEMEKGYDLIVLNYANPDMVGH TGVFEAAVRAIKAVDECLGRVVDKFLSLGGTAIITADHGNAEKMLEEDGSPHTAHTTNPVPFILVGEKYRGIKLKEKGSL ANVAPTILKILELEIPEEMTSEPLF
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=507, Percent_Identity=53.4516765285996, Blast_Score=560, Evalue=1e-161, Organism=Caenorhabditis elegans, GI32564249, Length=509, Percent_Identity=46.7583497053045, Blast_Score=443, Evalue=1e-125, Organism=Caenorhabditis elegans, GI17507741, Length=509, Percent_Identity=46.7583497053045, Blast_Score=443, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 56852; Mature: 56720
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLLTILDGWGIAETTYGNSIKEAGTPNFNRYWDNYPHTILEASGLAVGLPRGQMGNSE CCEEEEEECCCCCEECCCCCCHHHCCCCCCHHHCCCCCHHHEECCCCEEECCCCCCCCCC VGHLNMGAGRIVYQELTRITKEIEEGSFFQNRELLEAVNHAQKTGGNLHLMGLLSDGGVH CCEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHH SHIEHLFALLELCRREKFSRVFIHPFLDGRDVPPQNAREYIEALEARLKELGFGQIATVM HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH GRYYAMDRDKRWERTEKAYRAMVFGEGFKVTEPEAAVALAYDRGETDEFVSPTVVLTSEG HHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCCCCCCCEEEEECCC QPRGVVKEGDSIIFFNFRPDRARQITRAFVDDDFTGFNRKKIENLHFVCFTQYDKTIKAP CCCCCEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCHHHHH VAFLPQTIENCLGEYLSKKQKKQLRIAETEKYAHVTFFFNGGVEKPYPGEERILIPSPKV HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCCCE ATYDLKPEMSAYEVTEKLLEEMEKGYDLIVLNYANPDMVGHTGVFEAAVRAIKAVDECLG EEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH RVVDKFLSLGGTAIITADHGNAEKMLEEDGSPHTAHTTNPVPFILVGEKYRGIKLKEKGS HHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCC LANVAPTILKILELEIPEEMTSEPLF CHHHHHHHHHHHHHCCCHHHHCCCCC >Mature Secondary Structure SVLLTILDGWGIAETTYGNSIKEAGTPNFNRYWDNYPHTILEASGLAVGLPRGQMGNSE CEEEEEECCCCCEECCCCCCHHHCCCCCCHHHCCCCCHHHEECCCCEEECCCCCCCCCC VGHLNMGAGRIVYQELTRITKEIEEGSFFQNRELLEAVNHAQKTGGNLHLMGLLSDGGVH CCEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHH SHIEHLFALLELCRREKFSRVFIHPFLDGRDVPPQNAREYIEALEARLKELGFGQIATVM HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH GRYYAMDRDKRWERTEKAYRAMVFGEGFKVTEPEAAVALAYDRGETDEFVSPTVVLTSEG HHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCCCCCCCEEEEECCC QPRGVVKEGDSIIFFNFRPDRARQITRAFVDDDFTGFNRKKIENLHFVCFTQYDKTIKAP CCCCCEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCHHHHH VAFLPQTIENCLGEYLSKKQKKQLRIAETEKYAHVTFFFNGGVEKPYPGEERILIPSPKV HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCCCE ATYDLKPEMSAYEVTEKLLEEMEKGYDLIVLNYANPDMVGHTGVFEAAVRAIKAVDECLG EEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH RVVDKFLSLGGTAIITADHGNAEKMLEEDGSPHTAHTTNPVPFILVGEKYRGIKLKEKGS HHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCC LANVAPTILKILELEIPEEMTSEPLF CHHHHHHHHHHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA