| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78042956
Identifier: 78042956
GI number: 78042956
Start: 1523921
End: 1524499
Strand: Direct
Name: 78042956
Synonym: CHY_1710
Alternate gene names: NA
Gene position: 1523921-1524499 (Clockwise)
Preceding gene: 78042795
Following gene: 78044919
Centisome position: 63.46
GC content: 41.45
Gene sequence:
>579_bases ATGGGAGAAGATAAAAATACCACCGACTGCTGCTGTACAAATAAATCTACCTGCTGCGGGGAAAGTAGTGAAGTTTCAAA AAACCATGAAAATCGTGAGCGTCTAGTCATCGACTTTTTGTATCTGGACCTTGATGTTTGCGTGCGGTGCCAGGGGGCAG AAAAATCGCTGGAAAGTGCAATTGATGATGTAAAACATGTTTTAGAATTGGCGGGCATCGAGGTCGTTGTAAATAAAATA AATGTCATAAATGAAGAATTAGCAAAAAAATATCACTTTGTAAGCTCTCCCACCATCCGCATCAATGGCCGAGATATTCA ACTTGAAGTTCATGAAAATACTTGCCAGTCCTGCGGAGATTTATGTGGCGATGAGGTGAACTGCCGGGTCTATGTTTATA AAGGTCAGGAGTACACCGTCCCGCCAAAGGAAATGATTGTAGAAGCTATTTTACGAGAAGCATTCGGCGGAAAAGAAAAC CACCGGGCAGAAGAAAAGCAGGAGAAATATGTTCTGCCTGAAAACTTAAGACGTTTTTACGAAGGCTTAAAAAGCAAGCC AAAAAACTACTGCTGTTAA
Upstream 100 bases:
>100_bases CTGCAAATATTGTTGAAAAAAGGACGTAAGGCAGATGCGTCCTTTTTTCTTTTTTACCGTCTTAATTAATAAAAATGTAT TTTTAGGAGGAGGATTTACT
Downstream 100 bases:
>100_bases ACTCTTAAGAAAAGAAAAAAGCCTTTGGAACATTCCCAGAGGCTTTTTTCTTTTTTTGATCACCCTTTCCGCAATCCTAA ATTTCCGCTCTTTTCTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MGEDKNTTDCCCTNKSTCCGESSEVSKNHENRERLVIDFLYLDLDVCVRCQGAEKSLESAIDDVKHVLELAGIEVVVNKI NVINEELAKKYHFVSSPTIRINGRDIQLEVHENTCQSCGDLCGDEVNCRVYVYKGQEYTVPPKEMIVEAILREAFGGKEN HRAEEKQEKYVLPENLRRFYEGLKSKPKNYCC
Sequences:
>Translated_192_residues MGEDKNTTDCCCTNKSTCCGESSEVSKNHENRERLVIDFLYLDLDVCVRCQGAEKSLESAIDDVKHVLELAGIEVVVNKI NVINEELAKKYHFVSSPTIRINGRDIQLEVHENTCQSCGDLCGDEVNCRVYVYKGQEYTVPPKEMIVEAILREAFGGKEN HRAEEKQEKYVLPENLRRFYEGLKSKPKNYCC >Mature_191_residues GEDKNTTDCCCTNKSTCCGESSEVSKNHENRERLVIDFLYLDLDVCVRCQGAEKSLESAIDDVKHVLELAGIEVVVNKIN VINEELAKKYHFVSSPTIRINGRDIQLEVHENTCQSCGDLCGDEVNCRVYVYKGQEYTVPPKEMIVEAILREAFGGKENH RAEEKQEKYVLPENLRRFYEGLKSKPKNYCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21877; Mature: 21746
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEDKNTTDCCCTNKSTCCGESSEVSKNHENRERLVIDFLYLDLDVCVRCQGAEKSLESA CCCCCCCCCEEECCCCCCCCCCHHHHCCCCCHHHEEHHHHHHHHHHHEECCCHHHHHHHH IDDVKHVLELAGIEVVVNKINVINEELAKKYHFVSSPTIRINGRDIQLEVHENTCQSCGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCHHHHHHHH LCGDEVNCRVYVYKGQEYTVPPKEMIVEAILREAFGGKENHRAEEKQEKYVLPENLRRFY HCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHH EGLKSKPKNYCC HHHHCCCCCCCC >Mature Secondary Structure GEDKNTTDCCCTNKSTCCGESSEVSKNHENRERLVIDFLYLDLDVCVRCQGAEKSLESA CCCCCCCCEEECCCCCCCCCCHHHHCCCCCHHHEEHHHHHHHHHHHEECCCHHHHHHHH IDDVKHVLELAGIEVVVNKINVINEELAKKYHFVSSPTIRINGRDIQLEVHENTCQSCGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCHHHHHHHH LCGDEVNCRVYVYKGQEYTVPPKEMIVEAILREAFGGKENHRAEEKQEKYVLPENLRRFY HCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHH EGLKSKPKNYCC HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA