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The map label for this gene is nrfH [H]

Identifier: 78042788

GI number: 78042788

Start: 208459

End: 208872

Strand: Direct

Name: nrfH [H]

Synonym: CHY_0242

Alternate gene names: 78042788

Gene position: 208459-208872 (Clockwise)

Preceding gene: 78043246

Following gene: 78042886

Centisome position: 8.68

GC content: 43.0

Gene sequence:

>414_bases
ATGAAGGGATTATTTTACCTGAGTGTTGCAGTATTACTAATTTATGGCCTAATGTTTTTGGTAGGGTTGAAGCCGGTTCA
TGCTTATTTTGATAGCCCTGAATTTTGTTCTACCTGCCACGTAATGAAAAAGGAGTACCAGGGATATTTAAAAAAACCAC
ATGCAGGAAAAGTAAGCTGTGGGGGATGTCATTTACCGGCGGGATTTCCCCGTTACGGGATTGAAAAAACTTATTCGGGA
ATCAGAGATTTTCTTTCTTTTTCCTTCCGTACCTATCCCGATGTAATAAAAATTTCCTCCCGCTCGCAAAAAATTGTGGA
GGAAAACTGTCTTCGCTGTCATCAGGGGGTCACGGAAAAGCTTTTGGGGGTGTCCCAGCGGTGCACCTTTTGTCACCGGC
AGGTATTTCACTGA

Upstream 100 bases:

>100_bases
GGGTTTCGGCATCGAGGCCAGGCTCATCAGGAATAGCTCTCAAGAGTAAGTATTCTCTAAAGAAAATAAAGGAATAATAA
AAGAAAGAAAGGGGGATAAG

Downstream 100 bases:

>100_bases
AAACTGTTAGGAGGGGATAATTTTGACCCGCGGTATAACAATTGGAATTATTATAGTTGCTCTAACTTTGCTTGCGGGAA
CTTTTGTGGCCTACATTACT

Product: putative cytochrome c-type protein NrfH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKGLFYLSVAVLLIYGLMFLVGLKPVHAYFDSPEFCSTCHVMKKEYQGYLKKPHAGKVSCGGCHLPAGFPRYGIEKTYSG
IRDFLSFSFRTYPDVIKISSRSQKIVEENCLRCHQGVTEKLLGVSQRCTFCHRQVFH

Sequences:

>Translated_137_residues
MKGLFYLSVAVLLIYGLMFLVGLKPVHAYFDSPEFCSTCHVMKKEYQGYLKKPHAGKVSCGGCHLPAGFPRYGIEKTYSG
IRDFLSFSFRTYPDVIKISSRSQKIVEENCLRCHQGVTEKLLGVSQRCTFCHRQVFH
>Mature_137_residues
MKGLFYLSVAVLLIYGLMFLVGLKPVHAYFDSPEFCSTCHVMKKEYQGYLKKPHAGKVSCGGCHLPAGFPRYGIEKTYSG
IRDFLSFSFRTYPDVIKISSRSQKIVEENCLRCHQGVTEKLLGVSQRCTFCHRQVFH

Specific function: Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017571
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 15608; Mature: 15608

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLFYLSVAVLLIYGLMFLVGLKPVHAYFDSPEFCSTCHVMKKEYQGYLKKPHAGKVSC
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GGCHLPAGFPRYGIEKTYSGIRDFLSFSFRTYPDVIKISSRSQKIVEENCLRCHQGVTEK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
LLGVSQRCTFCHRQVFH
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGLFYLSVAVLLIYGLMFLVGLKPVHAYFDSPEFCSTCHVMKKEYQGYLKKPHAGKVSC
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GGCHLPAGFPRYGIEKTYSGIRDFLSFSFRTYPDVIKISSRSQKIVEENCLRCHQGVTEK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
LLGVSQRCTFCHRQVFH
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]