| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is cbiL [H]
Identifier: 78042761
GI number: 78042761
Start: 670318
End: 670977
Strand: Direct
Name: cbiL [H]
Synonym: CHY_0761
Alternate gene names: 78042761
Gene position: 670318-670977 (Clockwise)
Preceding gene: 78045065
Following gene: 78044806
Centisome position: 27.91
GC content: 41.67
Gene sequence:
>660_bases ATGGCTAAACTTTACGTGGTTGGTGTTGGTCCGGGGGACCCCGAGCTTATTACGGTGAAAGCTATGAAGATTTTGCGAGG GGTACGGGTTTTAGTTTTTCCCGGAAAAAGGGCTTTTAAAGTTGTGGAAAGTTTTCTTTCAGATGATAAAGAAATTCTCT TTTTTAATTTTCCCATGGTGGAAGACGAGGGGCAAAAACGGGAAGCGGCGCACACCTTTGCCCAAAAAATTTTAGAGTAT TTAAACCGGGAAGAAGTTTCTTTTTTTACCCTGGGAGACCCGGGTTTATACAGTACCGCTGGATATTTATTGGAGGCGCT AAAACAGTTAGGTTTTGCAGGGGATATAGAAATAGTTCCGGGGATAAATTCCTTTTCACTGGCAGCCGCTAAGTCTTTCT TTAACCTGGCTTTTGAAGATGAAAAGGTAGAAATCCTATCGACTTTGCCGGAAGATTTTACTTTTGAGCCCAAAACTACC TATGTTTTTTTAAAACTTTCCTCCTATTACGACCGCTTTTTAGAGCTGGTAAAGGAAGCAAAGATCCAGGGATATTATTT TAAAGAGCTTGGTACCGAAGAGGAAAAAATCTGTTCTTTTAATGAACTTCCCGAAAAAACCGGGTATTTTTCCCTGGCCC TGGCGAAGAGGGGGACTTAG
Upstream 100 bases:
>100_bases AGCATAGCGGTTACCAGGTTTAAAAAAGCAGGAAGCTATCATATCCTGAATGCGCAAAATCCCGTATTTATCTTTACCGG AAGGAAAAAGGGGGAAAAAA
Downstream 100 bases:
>100_bases CCGTGAAAGTTTATTTAGTAGGCGCCGGACCTGGAGATCCCGAGTTAATAACTGTTAAAGGGAAAAAACTTTTAGAGGAA GCTGATTTAATTGTTTATGC
Product: putative precorrin-2 C20-methyltransferase
Products: NA
Alternate protein names: S-adenosyl-L-methionine--cobalt-precorrin-2 methyltransferase [H]
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MAKLYVVGVGPGDPELITVKAMKILRGVRVLVFPGKRAFKVVESFLSDDKEILFFNFPMVEDEGQKREAAHTFAQKILEY LNREEVSFFTLGDPGLYSTAGYLLEALKQLGFAGDIEIVPGINSFSLAAAKSFFNLAFEDEKVEILSTLPEDFTFEPKTT YVFLKLSSYYDRFLELVKEAKIQGYYFKELGTEEEKICSFNELPEKTGYFSLALAKRGT
Sequences:
>Translated_219_residues MAKLYVVGVGPGDPELITVKAMKILRGVRVLVFPGKRAFKVVESFLSDDKEILFFNFPMVEDEGQKREAAHTFAQKILEY LNREEVSFFTLGDPGLYSTAGYLLEALKQLGFAGDIEIVPGINSFSLAAAKSFFNLAFEDEKVEILSTLPEDFTFEPKTT YVFLKLSSYYDRFLELVKEAKIQGYYFKELGTEEEKICSFNELPEKTGYFSLALAKRGT >Mature_218_residues AKLYVVGVGPGDPELITVKAMKILRGVRVLVFPGKRAFKVVESFLSDDKEILFFNFPMVEDEGQKREAAHTFAQKILEYL NREEVSFFTLGDPGLYSTAGYLLEALKQLGFAGDIEIVPGINSFSLAAAKSFFNLAFEDEKVEILSTLPEDFTFEPKTTY VFLKLSSYYDRFLELVKEAKIQGYYFKELGTEEEKICSFNELPEKTGYFSLALAKRGT
Specific function: Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway [H]
COG id: COG2243
COG function: function code H; Precorrin-2 methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR012382 - InterPro: IPR006364 - InterPro: IPR003043 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.151 [H]
Molecular weight: Translated: 24763; Mature: 24632
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLYVVGVGPGDPELITVKAMKILRGVRVLVFPGKRAFKVVESFLSDDKEILFFNFPMV CCEEEEEEECCCCCCEEEHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCEE EDEGQKREAAHTFAQKILEYLNREEVSFFTLGDPGLYSTAGYLLEALKQLGFAGDIEIVP CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEC GINSFSLAAAKSFFNLAFEDEKVEILSTLPEDFTFEPKTTYVFLKLSSYYDRFLELVKEA CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHH KIQGYYFKELGTEEEKICSFNELPEKTGYFSLALAKRGT HCCCEEHHHCCCCHHHHCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure AKLYVVGVGPGDPELITVKAMKILRGVRVLVFPGKRAFKVVESFLSDDKEILFFNFPMV CEEEEEEECCCCCCEEEHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCEE EDEGQKREAAHTFAQKILEYLNREEVSFFTLGDPGLYSTAGYLLEALKQLGFAGDIEIVP CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEC GINSFSLAAAKSFFNLAFEDEKVEILSTLPEDFTFEPKTTYVFLKLSSYYDRFLELVKEA CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHH KIQGYYFKELGTEEEKICSFNELPEKTGYFSLALAKRGT HCCCEEHHHCCCCHHHHCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]