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The map label for this gene is ydfK [H]

Identifier: 78042738

GI number: 78042738

Start: 2010858

End: 2011544

Strand: Direct

Name: ydfK [H]

Synonym: CHY_2225

Alternate gene names: 78042738

Gene position: 2010858-2011544 (Clockwise)

Preceding gene: 78043993

Following gene: 78044363

Centisome position: 83.73

GC content: 40.47

Gene sequence:

>687_bases
ATGCTGGGAACAATTGTAAACTTTATTGCCATTCTTCTTGGCGGAAGTATCGGTGTATTTTTTAAAAAGAGCCTGCCTGA
AAACTATAAGGAAGTAGTAATGAACATTTTAGCCTTATCGGTAGTAGTCGTTGGTATCCAAATGGCTATCACCTCGAAAA
ACTTTTTGGTAGTAATTTTAAGCCTGGTACTGGGAGGCCTGGTGGGGGAATTTTTGGGAATAGAAAAGGGTCTTAACTCT
TTAGGGCAAAAACTTGAGAAACGTTTTTCCGAGAGTGGAGGAGATTTTGCCCGGGGCTTTGTTTACGCCACTTTAGTTTT
CTGCGTGGGAGCTATGGCGATTATGGGAGCAATTGAGGATGGTTTAAATAATAACCACCAAATTCTCTTTATTAAATCCC
TTTTAGACGGTATTTCTTCAATTATATTTGCAGCGACACTGGGAAAAGGTGTTATCTTTTCCGCTTTTCCAGTACTAATC
TATCAAGGAAGTATTGCCCTTTTTGCCGGGCTTATTAAAGGCTTTTTAACGCCGGCAATAGTTAATGAACTCACCGCCAC
CGGTGGTATACTTATAATCGGGATCGGTACGAACATGTTAAACTTAACCAAGCTAAAAATAGGAAATTACCTCCCGGCAC
TGATCTTTGTCTTCGTCTTTGAGCCCGCTTTGCGCTTTTTAAGCTAA

Upstream 100 bases:

>100_bases
ATTATTTATACCCAAAATTACTATTCTATGTTAGTATTTTACTATATATTACTTGCAAATTTAAATTATTATCTTCAATT
TTATTTCAGGAGGGGGAAAG

Downstream 100 bases:

>100_bases
ATAAGGAAGGATGGAAATATGGAAAAGAAAAACCTCGGCTTAACTTATATTTTACTGGTTATAGTTGCAATGCTTTGGGC
CAGTGCCTTTGTTGCCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MLGTIVNFIAILLGGSIGVFFKKSLPENYKEVVMNILALSVVVVGIQMAITSKNFLVVILSLVLGGLVGEFLGIEKGLNS
LGQKLEKRFSESGGDFARGFVYATLVFCVGAMAIMGAIEDGLNNNHQILFIKSLLDGISSIIFAATLGKGVIFSAFPVLI
YQGSIALFAGLIKGFLTPAIVNELTATGGILIIGIGTNMLNLTKLKIGNYLPALIFVFVFEPALRFLS

Sequences:

>Translated_228_residues
MLGTIVNFIAILLGGSIGVFFKKSLPENYKEVVMNILALSVVVVGIQMAITSKNFLVVILSLVLGGLVGEFLGIEKGLNS
LGQKLEKRFSESGGDFARGFVYATLVFCVGAMAIMGAIEDGLNNNHQILFIKSLLDGISSIIFAATLGKGVIFSAFPVLI
YQGSIALFAGLIKGFLTPAIVNELTATGGILIIGIGTNMLNLTKLKIGNYLPALIFVFVFEPALRFLS
>Mature_228_residues
MLGTIVNFIAILLGGSIGVFFKKSLPENYKEVVMNILALSVVVVGIQMAITSKNFLVVILSLVLGGLVGEFLGIEKGLNS
LGQKLEKRFSESGGDFARGFVYATLVFCVGAMAIMGAIEDGLNNNHQILFIKSLLDGISSIIFAATLGKGVIFSAFPVLI
YQGSIALFAGLIKGFLTPAIVNELTATGGILIIGIGTNMLNLTKLKIGNYLPALIFVFVFEPALRFLS

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=170, Percent_Identity=30.5882352941176, Blast_Score=87, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24196; Mature: 24196

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTIVNFIAILLGGSIGVFFKKSLPENYKEVVMNILALSVVVVGIQMAITSKNFLVVIL
CHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SLVLGGLVGEFLGIEKGLNSLGQKLEKRFSESGGDFARGFVYATLVFCVGAMAIMGAIED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLNNNHQILFIKSLLDGISSIIFAATLGKGVIFSAFPVLIYQGSIALFAGLIKGFLTPAI
CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VNELTATGGILIIGIGTNMLNLTKLKIGNYLPALIFVFVFEPALRFLS
HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLGTIVNFIAILLGGSIGVFFKKSLPENYKEVVMNILALSVVVVGIQMAITSKNFLVVIL
CHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SLVLGGLVGEFLGIEKGLNSLGQKLEKRFSESGGDFARGFVYATLVFCVGAMAIMGAIED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLNNNHQILFIKSLLDGISSIIFAATLGKGVIFSAFPVLIYQGSIALFAGLIKGFLTPAI
CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VNELTATGGILIIGIGTNMLNLTKLKIGNYLPALIFVFVFEPALRFLS
HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]