Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is yjjP [C]

Identifier: 78042687

GI number: 78042687

Start: 127913

End: 128662

Strand: Direct

Name: yjjP [C]

Synonym: CHY_0151

Alternate gene names: 78042687

Gene position: 127913-128662 (Clockwise)

Preceding gene: 78043592

Following gene: 78044989

Centisome position: 5.33

GC content: 44.8

Gene sequence:

>750_bases
ATGAACTACCTGGATGTTTTAAGGCTTACGGTTTTAGCCGGAGAAATAATGATTAAAAGCGGAGCGGAAATTTACCGCAC
GGAAGATGTAATGGACCGGATTGCTAAAAATTACGGGGTAAAACGCGTGGAAAGCTTTGTGACTCCAACCGGCATTTTAT
GCGCCATCGAAACCGACGATGGACAGGTTTTTACTACCGTTAGGCGGATAGAAAGCCGGGGTTTTAATTTAACGAAAATT
GATAAAGTTAATGATTTTTCCCGCCGACTTGCCAGACGGCATATTCCTGTGGAGGAAGGCATAGCCGAACTCACTAAAGT
AGCCCACGAAAAGAGTGAATATTCCTGGTGGGTAAAAGTCTTGGCAGCAGGTTTAGGGGCTTTCTTTGCGACGGGTTTAA
TTGGTGGCACGGTGGTAGAAATGATTATTTCTTTGATTATTGCGTTACTGGTAAGGGGTTTTGTCATGGTAATTCCGGAC
CTTGGCTTATTTCCCTTTTTCCTTGATTTAGTGGGAGGCTTTCTTTCTACTTTGCTGGTAGTAGCAATTTCTAAGTTTTA
TCCCATTTCCTTAGGGGTTACCGTGGTAGGAAGTATCATGCCCTTTATTCCGGGGATGAGCATTACTAATTCCATCCGGG
ATGCTATTGCCGGGGACTTCTTGGCCAGTCAGGCCCGGGGGCTTGAAGCGTTTTTAAGGGTTATTGCGTTAGCGGTAAGT
GCTGCGGTGGTTTTAGCTTTTCTAACATAG

Upstream 100 bases:

>100_bases
GGTGGTCAGTGGTCAGCAAAATAATAAAAAAAATCATACCTTTTTACGGCGGAAGGAGGAAATGGGAAGAAAAGAAAGAA
AAAAGTAAGGGGTGAGGAAA

Downstream 100 bases:

>100_bases
AAATGGGGTAGGGAAGATGAACGTTTTGTATGCTTTTTTTCTTTCTTTTACCTTTGGAATTTTATTTAATGCGCCGATGG
AAAGCCTCTTTTACGGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNYLDVLRLTVLAGEIMIKSGAEIYRTEDVMDRIAKNYGVKRVESFVTPTGILCAIETDDGQVFTTVRRIESRGFNLTKI
DKVNDFSRRLARRHIPVEEGIAELTKVAHEKSEYSWWVKVLAAGLGAFFATGLIGGTVVEMIISLIIALLVRGFVMVIPD
LGLFPFFLDLVGGFLSTLLVVAISKFYPISLGVTVVGSIMPFIPGMSITNSIRDAIAGDFLASQARGLEAFLRVIALAVS
AAVVLAFLT

Sequences:

>Translated_249_residues
MNYLDVLRLTVLAGEIMIKSGAEIYRTEDVMDRIAKNYGVKRVESFVTPTGILCAIETDDGQVFTTVRRIESRGFNLTKI
DKVNDFSRRLARRHIPVEEGIAELTKVAHEKSEYSWWVKVLAAGLGAFFATGLIGGTVVEMIISLIIALLVRGFVMVIPD
LGLFPFFLDLVGGFLSTLLVVAISKFYPISLGVTVVGSIMPFIPGMSITNSIRDAIAGDFLASQARGLEAFLRVIALAVS
AAVVLAFLT
>Mature_249_residues
MNYLDVLRLTVLAGEIMIKSGAEIYRTEDVMDRIAKNYGVKRVESFVTPTGILCAIETDDGQVFTTVRRIESRGFNLTKI
DKVNDFSRRLARRHIPVEEGIAELTKVAHEKSEYSWWVKVLAAGLGAFFATGLIGGTVVEMIISLIIALLVRGFVMVIPD
LGLFPFFLDLVGGFLSTLLVVAISKFYPISLGVTVVGSIMPFIPGMSITNSIRDAIAGDFLASQARGLEAFLRVIALAVS
AAVVLAFLT

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27120; Mature: 27120

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYLDVLRLTVLAGEIMIKSGAEIYRTEDVMDRIAKNYGVKRVESFVTPTGILCAIETDD
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEEECCC
GQVFTTVRRIESRGFNLTKIDKVNDFSRRLARRHIPVEEGIAELTKVAHEKSEYSWWVKV
CHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAAGLGAFFATGLIGGTVVEMIISLIIALLVRGFVMVIPDLGLFPFFLDLVGGFLSTLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VAISKFYPISLGVTVVGSIMPFIPGMSITNSIRDAIAGDFLASQARGLEAFLRVIALAVS
HHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVVLAFLT
HHHHHHHCC
>Mature Secondary Structure
MNYLDVLRLTVLAGEIMIKSGAEIYRTEDVMDRIAKNYGVKRVESFVTPTGILCAIETDD
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEEECCC
GQVFTTVRRIESRGFNLTKIDKVNDFSRRLARRHIPVEEGIAELTKVAHEKSEYSWWVKV
CHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAAGLGAFFATGLIGGTVVEMIISLIIALLVRGFVMVIPDLGLFPFFLDLVGGFLSTLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VAISKFYPISLGVTVVGSIMPFIPGMSITNSIRDAIAGDFLASQARGLEAFLRVIALAVS
HHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVVLAFLT
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA