| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 77761176
Identifier: 77761176
GI number: 77761176
Start: 2308494
End: 2310131
Strand: Direct
Name: 77761176
Synonym: XC_1911
Alternate gene names: NA
Gene position: 2308494-2310131 (Clockwise)
Preceding gene: 66768231
Following gene: 66768233
Centisome position: 44.84
GC content: 63.31
Gene sequence:
>1638_bases ATGAACAGGGGTAAGACATCGCGTTGGCTGGCAGTTCCACTGATGGTGGGGGCGCTGTTGCTGGCGTCCTGCAAACAGGC CGAGGAGCCCAAGGTGGCTGAAAAGAAGGCACCCGTGAAAGTGATCCTGGTGGAAGCACAGATTCCGCCCAAGCCGGTCA AGCCGCCGCTGCCGCCGCTGTTTTCCGATATCGAACGCCGCACCTTCCAGTTTTTCTGGGACACCACCAACGAACTCAAT GGGCTGTCGCCGGACCGGTTTCCCTCGCGTCCGTTCGCCAGCATCGCCTCGGTGGGCTTTGCGCTCACCGCGTATCCGAT CGGTATCGAGAACGGCTGGGTCAGCCGCAATCAGGCGATCGACCGCACCTTGACCACCCTCAAATTCTTCCGCGATGCGC CGATGGGGCCGCAGCGGACCGGTAAGGCCGGCTACAAGGGCTTTTACTATCACTTTCTGGATATGCAGCAGGGCAACCGC TATGACAGCTGGGTCGAGCTGTCGAGCGTGGACACCGCGCTGCTGATGATGGGCGTGCTGTTCACCCAGTCGTACTACGA CGGTGACGACCCGCGCGAAAAGGAAATCCGCCAGATCGCCGACACGCTGTACAAGCGTGTGGACTGGCGCTGGCTGCAGC AGCGGGCGCCGCTGATCTCGATGGGTTGGTTCCCCGAGAGCGGCTTCATCGACCACGACTGGATGGGCTACAACGAAGCC ATGATGCTGTACATCCTGGCGCTCGGCTCGCCCACGCACGGCGTGGAGCCGGATGCGTGGACGGTCTGGACCCGCACCTA CAACAACGACTGGGGCGTCTACCAGGGCCAGGAATACCTGTCCTTCGGCCCGATGTTCGGCCACCAGTACAGCCATGTCT GGATCGACTTCCGCGATATCCAGGACCAGTACATGCGCGAGCGCGGCATCGACTACTTCCTCAACAGCCGCCGCGCCACG CTGGCCCAGCGCGACTACGCCATCGATAACCCGATGAAGTGGAAGGACTATGGCGAAAACGTCTGGGGCCTCACCGCCGG CGACGGCCCGCAGAACACCAGCCAGGAATACCGCGGCGAGCAGCGCCAGTTCCGCCATTACTCTTCACGCGGCGCCGGCC TGCGCGAGAACTTCGACGACGGCACCATCGCGCCAACCGCGGCGATTTCCTCGATCGTGTTCGCACCGGAGGTGGTGATT CCGGCCACCGAAGAGATGCACAAGCGCTATGGCGACTTCCTGTATTCGAGCTATGGTTTCCTGGATTCGTTCAACCCCAG CTTCAACTACGACATCCCGCTCAAGACCGGGCGCATGGTGCCGGACCGTGGCTGGGTGGCCAGCGACTACATCGCCATCG ACCAGGGCCCGATCCTGGCGATGATCGCCAACTACCAGAACGAATTTGTCTGGAACGTGATGAAGAAGAACGCCTACATC CGTACCGGCCTGGAACGCGCCGGCTTCACCGGTGGCTGGCTCACGCCCGACGGCGAGCCGCAGCCGCTGCCCAAGAAGGA CGAGCAGGCCGCCGCAGCGCGCGCGCTGGGCATGGCCGAATCGCGTGCGGCCGCTGCCCAGGCGCAGCAGGACCCGTCGC AGCGGCAACACTCCTCGCAACGCCCCAAACCCGAGTAA
Upstream 100 bases:
>100_bases GCACGCGACCGTCCTGGCAGGTGCCAGGACGGTCGAAGTCGGCGCCCGGATAGGGTAGGTTTGCGTGCGAGATGTAATCG ATTACACGAGTGGGGGGCGG
Downstream 100 bases:
>100_bases TCCGTGCGCCTTTTGAAACTGATGATGATGGCCGCCGCACTGTGTCTGGGTGCGGCGGGATGTGAACGTTCCGAGCAGGG CCAGACCACCGTGCGCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MNRGKTSRWLAVPLMVGALLLASCKQAEEPKVAEKKAPVKVILVEAQIPPKPVKPPLPPLFSDIERRTFQFFWDTTNELN GLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAIDRTLTTLKFFRDAPMGPQRTGKAGYKGFYYHFLDMQQGNR YDSWVELSSVDTALLMMGVLFTQSYYDGDDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFIDHDWMGYNEA MMLYILALGSPTHGVEPDAWTVWTRTYNNDWGVYQGQEYLSFGPMFGHQYSHVWIDFRDIQDQYMRERGIDYFLNSRRAT LAQRDYAIDNPMKWKDYGENVWGLTAGDGPQNTSQEYRGEQRQFRHYSSRGAGLRENFDDGTIAPTAAISSIVFAPEVVI PATEEMHKRYGDFLYSSYGFLDSFNPSFNYDIPLKTGRMVPDRGWVASDYIAIDQGPILAMIANYQNEFVWNVMKKNAYI RTGLERAGFTGGWLTPDGEPQPLPKKDEQAAAARALGMAESRAAAAQAQQDPSQRQHSSQRPKPE
Sequences:
>Translated_545_residues MNRGKTSRWLAVPLMVGALLLASCKQAEEPKVAEKKAPVKVILVEAQIPPKPVKPPLPPLFSDIERRTFQFFWDTTNELN GLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAIDRTLTTLKFFRDAPMGPQRTGKAGYKGFYYHFLDMQQGNR YDSWVELSSVDTALLMMGVLFTQSYYDGDDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFIDHDWMGYNEA MMLYILALGSPTHGVEPDAWTVWTRTYNNDWGVYQGQEYLSFGPMFGHQYSHVWIDFRDIQDQYMRERGIDYFLNSRRAT LAQRDYAIDNPMKWKDYGENVWGLTAGDGPQNTSQEYRGEQRQFRHYSSRGAGLRENFDDGTIAPTAAISSIVFAPEVVI PATEEMHKRYGDFLYSSYGFLDSFNPSFNYDIPLKTGRMVPDRGWVASDYIAIDQGPILAMIANYQNEFVWNVMKKNAYI RTGLERAGFTGGWLTPDGEPQPLPKKDEQAAAARALGMAESRAAAAQAQQDPSQRQHSSQRPKPE >Mature_545_residues MNRGKTSRWLAVPLMVGALLLASCKQAEEPKVAEKKAPVKVILVEAQIPPKPVKPPLPPLFSDIERRTFQFFWDTTNELN GLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAIDRTLTTLKFFRDAPMGPQRTGKAGYKGFYYHFLDMQQGNR YDSWVELSSVDTALLMMGVLFTQSYYDGDDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFIDHDWMGYNEA MMLYILALGSPTHGVEPDAWTVWTRTYNNDWGVYQGQEYLSFGPMFGHQYSHVWIDFRDIQDQYMRERGIDYFLNSRRAT LAQRDYAIDNPMKWKDYGENVWGLTAGDGPQNTSQEYRGEQRQFRHYSSRGAGLRENFDDGTIAPTAAISSIVFAPEVVI PATEEMHKRYGDFLYSSYGFLDSFNPSFNYDIPLKTGRMVPDRGWVASDYIAIDQGPILAMIANYQNEFVWNVMKKNAYI RTGLERAGFTGGWLTPDGEPQPLPKKDEQAAAARALGMAESRAAAAQAQQDPSQRQHSSQRPKPE
Specific function: Unknown
COG id: COG5368
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62187; Mature: 62187
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRGKTSRWLAVPLMVGALLLASCKQAEEPKVAEKKAPVKVILVEAQIPPKPVKPPLPPL CCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEEECCCCCCCCCCCCHH FSDIERRTFQFFWDTTNELNGLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAI HHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCHHHH DRTLTTLKFFRDAPMGPQRTGKAGYKGFYYHFLDMQQGNRYDSWVELSSVDTALLMMGVL HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHH FTQSYYDGDDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFIDHDWMGYNEA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHH MMLYILALGSPTHGVEPDAWTVWTRTYNNDWGVYQGQEYLSFGPMFGHQYSHVWIDFRDI EEHHHHEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEHHHH QDQYMRERGIDYFLNSRRATLAQRDYAIDNPMKWKDYGENVWGLTAGDGPQNTSQEYRGE HHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCHHHCCH QRQFRHYSSRGAGLRENFDDGTIAPTAAISSIVFAPEVVIPATEEMHKRYGDFLYSSYGF HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCC LDSFNPSFNYDIPLKTGRMVPDRGWVASDYIAIDQGPILAMIANYQNEFVWNVMKKNAYI CCCCCCCCCEECCCCCCCCCCCCCCEECCEEEECCCCEEEEEHHCCHHHHHHHHHCCCHH RTGLERAGFTGGWLTPDGEPQPLPKKDEQAAAARALGMAESRAAAAQAQQDPSQRQHSSQ HHCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC RPKPE CCCCC >Mature Secondary Structure MNRGKTSRWLAVPLMVGALLLASCKQAEEPKVAEKKAPVKVILVEAQIPPKPVKPPLPPL CCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEEECCCCCCCCCCCCHH FSDIERRTFQFFWDTTNELNGLSPDRFPSRPFASIASVGFALTAYPIGIENGWVSRNQAI HHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCHHHH DRTLTTLKFFRDAPMGPQRTGKAGYKGFYYHFLDMQQGNRYDSWVELSSVDTALLMMGVL HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHH FTQSYYDGDDPREKEIRQIADTLYKRVDWRWLQQRAPLISMGWFPESGFIDHDWMGYNEA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHH MMLYILALGSPTHGVEPDAWTVWTRTYNNDWGVYQGQEYLSFGPMFGHQYSHVWIDFRDI EEHHHHEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEHHHH QDQYMRERGIDYFLNSRRATLAQRDYAIDNPMKWKDYGENVWGLTAGDGPQNTSQEYRGE HHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCHHHCCH QRQFRHYSSRGAGLRENFDDGTIAPTAAISSIVFAPEVVIPATEEMHKRYGDFLYSSYGF HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCC LDSFNPSFNYDIPLKTGRMVPDRGWVASDYIAIDQGPILAMIANYQNEFVWNVMKKNAYI CCCCCCCCCEECCCCCCCCCCCCCCEECCEEEECCCCEEEEEHHCCHHHHHHHHHCCCHH RTGLERAGFTGGWLTPDGEPQPLPKKDEQAAAARALGMAESRAAAAQAQQDPSQRQHSSQ HHCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC RPKPE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA