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The map label for this gene is ycjN [C]

Identifier: 66768233

GI number: 66768233

Start: 2310135

End: 2311481

Strand: Direct

Name: ycjN [C]

Synonym: XC_1912

Alternate gene names: 66768233

Gene position: 2310135-2311481 (Clockwise)

Preceding gene: 77761176

Following gene: 66768234

Centisome position: 44.87

GC content: 65.11

Gene sequence:

>1347_bases
GTGCGCCTTTTGAAACTGATGATGATGGCCGCCGCACTGTGTCTGGGTGCGGCGGGATGTGAACGTTCCGAGCAGGGCCA
GACCACCGTGCGCTTCTGGGCGATGGGCAAGGAAGCGGAGGTGGTGGCCGAGCTGGTGGATGAGTTCGAGCGGCAGAATC
CCGGCATCAAGGTGGATGTGCAGAACATCCCGATGACGGCCGCGCACGAAAAGCTGCTCACCGCCTTCGCCGCCGATGGG
CTGCCGGATGTGTGCCAGCTCGGCAACACCTGGCTGCCGGAATTCGCGCTGCTGGACACGCTGGAGCCGATGCAGCCGTA
TGTGGCGCGCTCGAGCATCGTCGATCCCAAGGACTACTTCCCCGGCGTATGGGACACCAATCTGGTCGACGGCACCTTGT
ACGGGGTGCCGTGGTACGTGGACACGCGCCTGTTGTTCTATCGCAAGGATTTGCTGCGCGAAGCCGGCTATACCGAGATG
CCCAAGACCTGGGCGGAGATGGAGCAGGTGATGGCGGCGATCAAGCGCCATGTCGGCCCGGACCGCTACGCCATCCTGAT
GCCGCTCAACGAGTTCGAGCAGCAGCTGTCGTTTGCGCTGCAGCAGGACGACCGCCTGCTACGCGACCACGATAACTACG
GCAACTTCCGTGGAGAAGGCTTCCGCAAGGCGCTGGGCTTCTACGACACCATGTACCAGAAGGGCTGGGCACCCAAGGTC
TCCGAGACCCAGGTCTCCAACGTTTGGTACGAATTCTTCAACGGCTACTACGCGTTCTACCTGTCCGGGCCCTGGAACGT
GCGCGAGTTCAAGCTGCGCCAGCCGCCGGGCATGGAAGGCAAGTGGGGCACCGCGCCGTTGCCGGGCCCCAACGGCCTGG
GTGCCGGCATTGCGGGTGGCTCCAGCCTGGTGATCTTCAAGTCGTCCCAGCACAAGGACGCCGCCTGGAAGCTGATCGAA
TATCTGTCCCAGCCGACCGTGCAGGCGCGCTTCCACGCCATCATCGGCGACCTGCCGCCGCGCCGCAGCACCTGGAAGTT
GCCGTCGCTGGCCAATGACGAGCTGGCGCATGCCTTCGGCGACCAGCTCGAGCGGGTCAAGGCCACGCCGAAGGTGCTGG
AGTGGGAGCGCATCGTGCAGGAGATGCGCCTGGTGACCGAGCGCGTGGTGCGCGGCGGGCAATCGCACGAGGACGCCGTG
CAGGAATTGGACAAACGCGTGGACGAGATTCTGGCCAAGCGCCGCTGGATCTACGAACAGGAAGGCGGGCATGTCGGCCC
GGCGGCCGCACCGGCCACGCCGATGCCTGCGCCGGCGAATGCAGCGGCTGAAGGAGCTGCCCGATGA

Upstream 100 bases:

>100_bases
CGCGCTGGGCATGGCCGAATCGCGTGCGGCCGCTGCCCAGGCGCAGCAGGACCCGTCGCAGCGGCAACACTCCTCGCAAC
GCCCCAAACCCGAGTAATCC

Downstream 100 bases:

>100_bases
TGAAGCGCAACTCCGTGGCCGGCTGGGTCTTCGCCGCGCCGTCGATCCTGGTGCTGGGCATGTTCTTCGGCGTGCCGGTG
TTCGCCGCGCTGGTGCTCAG

Product: ABC transporter sugar binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MRLLKLMMMAAALCLGAAGCERSEQGQTTVRFWAMGKEAEVVAELVDEFERQNPGIKVDVQNIPMTAAHEKLLTAFAADG
LPDVCQLGNTWLPEFALLDTLEPMQPYVARSSIVDPKDYFPGVWDTNLVDGTLYGVPWYVDTRLLFYRKDLLREAGYTEM
PKTWAEMEQVMAAIKRHVGPDRYAILMPLNEFEQQLSFALQQDDRLLRDHDNYGNFRGEGFRKALGFYDTMYQKGWAPKV
SETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGMEGKWGTAPLPGPNGLGAGIAGGSSLVIFKSSQHKDAAWKLIE
YLSQPTVQARFHAIIGDLPPRRSTWKLPSLANDELAHAFGDQLERVKATPKVLEWERIVQEMRLVTERVVRGGQSHEDAV
QELDKRVDEILAKRRWIYEQEGGHVGPAAAPATPMPAPANAAAEGAAR

Sequences:

>Translated_448_residues
MRLLKLMMMAAALCLGAAGCERSEQGQTTVRFWAMGKEAEVVAELVDEFERQNPGIKVDVQNIPMTAAHEKLLTAFAADG
LPDVCQLGNTWLPEFALLDTLEPMQPYVARSSIVDPKDYFPGVWDTNLVDGTLYGVPWYVDTRLLFYRKDLLREAGYTEM
PKTWAEMEQVMAAIKRHVGPDRYAILMPLNEFEQQLSFALQQDDRLLRDHDNYGNFRGEGFRKALGFYDTMYQKGWAPKV
SETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGMEGKWGTAPLPGPNGLGAGIAGGSSLVIFKSSQHKDAAWKLIE
YLSQPTVQARFHAIIGDLPPRRSTWKLPSLANDELAHAFGDQLERVKATPKVLEWERIVQEMRLVTERVVRGGQSHEDAV
QELDKRVDEILAKRRWIYEQEGGHVGPAAAPATPMPAPANAAAEGAAR
>Mature_448_residues
MRLLKLMMMAAALCLGAAGCERSEQGQTTVRFWAMGKEAEVVAELVDEFERQNPGIKVDVQNIPMTAAHEKLLTAFAADG
LPDVCQLGNTWLPEFALLDTLEPMQPYVARSSIVDPKDYFPGVWDTNLVDGTLYGVPWYVDTRLLFYRKDLLREAGYTEM
PKTWAEMEQVMAAIKRHVGPDRYAILMPLNEFEQQLSFALQQDDRLLRDHDNYGNFRGEGFRKALGFYDTMYQKGWAPKV
SETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGMEGKWGTAPLPGPNGLGAGIAGGSSLVIFKSSQHKDAAWKLIE
YLSQPTVQARFHAIIGDLPPRRSTWKLPSLANDELAHAFGDQLERVKATPKVLEWERIVQEMRLVTERVVRGGQSHEDAV
QELDKRVDEILAKRRWIYEQEGGHVGPAAAPATPMPAPANAAAEGAAR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 50413; Mature: 50413

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLKLMMMAAALCLGAAGCERSEQGQTTVRFWAMGKEAEVVAELVDEFERQNPGIKVDV
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEE
QNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMQPYVARSSIVDPKDYF
CCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHC
PGVWDTNLVDGTLYGVPWYVDTRLLFYRKDLLREAGYTEMPKTWAEMEQVMAAIKRHVGP
CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
DRYAILMPLNEFEQQLSFALQQDDRLLRDHDNYGNFRGEGFRKALGFYDTMYQKGWAPKV
CCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
SETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGMEGKWGTAPLPGPNGLGAGIAGG
CHHHHHHHHHHHHCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSLVIFKSSQHKDAAWKLIEYLSQPTVQARFHAIIGDLPPRRSTWKLPSLANDELAHAFG
CEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
DQLERVKATPKVLEWERIVQEMRLVTERVVRGGQSHEDAVQELDKRVDEILAKRRWIYEQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
EGGHVGPAAAPATPMPAPANAAAEGAAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLLKLMMMAAALCLGAAGCERSEQGQTTVRFWAMGKEAEVVAELVDEFERQNPGIKVDV
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEE
QNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMQPYVARSSIVDPKDYF
CCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHC
PGVWDTNLVDGTLYGVPWYVDTRLLFYRKDLLREAGYTEMPKTWAEMEQVMAAIKRHVGP
CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
DRYAILMPLNEFEQQLSFALQQDDRLLRDHDNYGNFRGEGFRKALGFYDTMYQKGWAPKV
CCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
SETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGMEGKWGTAPLPGPNGLGAGIAGG
CHHHHHHHHHHHHCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSLVIFKSSQHKDAAWKLIEYLSQPTVQARFHAIIGDLPPRRSTWKLPSLANDELAHAFG
CEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
DQLERVKATPKVLEWERIVQEMRLVTERVVRGGQSHEDAVQELDKRVDEILAKRRWIYEQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
EGGHVGPAAAPATPMPAPANAAAEGAAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA