Click here to switch to the map view.

The map label for this gene is 77761117

Identifier: 77761117

GI number: 77761117

Start: 1042091

End: 1043197

Strand: Reverse

Name: 77761117

Synonym: XC_0864

Alternate gene names: NA

Gene position: 1043197-1042091 (Counterclockwise)

Preceding gene: 66767197

Following gene: 66767195

Centisome position: 20.26

GC content: 59.89

Gene sequence:

>1107_bases
TTGGGGCCCTTGGCCGATATCGGCTTCGGTGACTTCATTTTCTTCAAACTTGTCAACGATTACTTCAGCAACGAGATCCA
GAAGTTCGGGCTGGAGCTGATGCGCAACAGCATGCGCTGGGTCAGCACCATCGCACTGGCGGTCACCACGCTGTGGGTGA
TGATCCTGGGCTACCGCATCGCCACCGGGCAGTCGCGCGAGAGCGCCATGGCCACGATGATCAAGGCCGGCAAGGTCGCC
ATCATCATCAGCATTGCCTCGGCACTCGGGGCCAATGGCGCCATGCTGCACCAGACACTGACCGAGAACCTGGACAAGCA
AATCCATGGGCTGTTCACCGGCAAGGAAGGCAGCACTGCCGCCGATGCCATCGACGAAAATCTGGCCTATACACAGTTGG
CGCTGACCGCGCTGGATGCGGTCCGTATCGAACCCAATGACACCGAAGTGCTGGAAAAGAAGAGCCGGGCCATCTTCATG
GCCAGCTTCGGCACCGCCAGCCCGCCGATGGCCGCCGGGGCGATGCTGCTGCTGTTCAAGTTCACCATGGCCTTCTTGAT
CGGGATCGGGCCGATCTTCATCCTGGCGCTGATCTTCGACCAGACCAAGGACCTGTTCAAGAAGTGGCTGTTCTACATCA
TCGGCACACTGTTCTCGATGGCCATGCTCTCGGTGGTGACAGCCATGGTGCTCGAGTTCACCGCCAAGGTGGCCAAGGCC
TACTGGGCGGCAGAAATCATCATGCTCGGCAATGCCGAAGGCCTGTCGACCCAGGCCCTGCAGCAGGGCGGTATCGGGTT
GCTCATGACCGTGCTGATCATCAGCGTCCCCACAATGGTTGCGGCCGTATGGGAGGGCAACATGGGCAACTTCATGCACT
TCTCGGCATTTGGGGGCGCCACCGCATCGAGCCCAGGACCGCAGGGGCAGCCGGCCGGGTCGTATGTGCCGCAGCAGTCG
TCTAGGTCTACAGATCGGCCTACTGAGGTTGCGAACGACACACCCAGAACAGTATCCCGCGCAGTCGGTCAACCGGGAAG
CTCTGATTCTATTCCTGTGCCAGGTTCTCGCGGCAATGCCGGAAGAAATGAAAGTGGCAATGCCTAA

Upstream 100 bases:

>100_bases
CGTGTAATGTAAGGCCATGATCAAGCGGATCGCACCGATGACTGCCCCGATACCGACTGCCACTGCTGCAGGCCGGTGTG
CGCCGCGCGGGACAAGCTGG

Downstream 100 bases:

>100_bases
GATTGCTTGGTTTTGAGCCATACACGAGGTTGTATGAATATGACATCTAATCGATTTTTTTTGCTTCTTCTTTTGATCAT
TGGGCTTCCGTCAATGGCCG

Product: VirB6 protein

Products: NA

Alternate protein names: Type IV Secretion System; VirB6-Like Membrane Protein; Virb6 Protein; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Type IV Secretion System Transmembrane Protein

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MGPLADIGFGDFIFFKLVNDYFSNEIQKFGLELMRNSMRWVSTIALAVTTLWVMILGYRIATGQSRESAMATMIKAGKVA
IIISIASALGANGAMLHQTLTENLDKQIHGLFTGKEGSTAADAIDENLAYTQLALTALDAVRIEPNDTEVLEKKSRAIFM
ASFGTASPPMAAGAMLLLFKFTMAFLIGIGPIFILALIFDQTKDLFKKWLFYIIGTLFSMAMLSVVTAMVLEFTAKVAKA
YWAAEIIMLGNAEGLSTQALQQGGIGLLMTVLIISVPTMVAAVWEGNMGNFMHFSAFGGATASSPGPQGQPAGSYVPQQS
SRSTDRPTEVANDTPRTVSRAVGQPGSSDSIPVPGSRGNAGRNESGNA

Sequences:

>Translated_368_residues
MGPLADIGFGDFIFFKLVNDYFSNEIQKFGLELMRNSMRWVSTIALAVTTLWVMILGYRIATGQSRESAMATMIKAGKVA
IIISIASALGANGAMLHQTLTENLDKQIHGLFTGKEGSTAADAIDENLAYTQLALTALDAVRIEPNDTEVLEKKSRAIFM
ASFGTASPPMAAGAMLLLFKFTMAFLIGIGPIFILALIFDQTKDLFKKWLFYIIGTLFSMAMLSVVTAMVLEFTAKVAKA
YWAAEIIMLGNAEGLSTQALQQGGIGLLMTVLIISVPTMVAAVWEGNMGNFMHFSAFGGATASSPGPQGQPAGSYVPQQS
SRSTDRPTEVANDTPRTVSRAVGQPGSSDSIPVPGSRGNAGRNESGNA
>Mature_367_residues
GPLADIGFGDFIFFKLVNDYFSNEIQKFGLELMRNSMRWVSTIALAVTTLWVMILGYRIATGQSRESAMATMIKAGKVAI
IISIASALGANGAMLHQTLTENLDKQIHGLFTGKEGSTAADAIDENLAYTQLALTALDAVRIEPNDTEVLEKKSRAIFMA
SFGTASPPMAAGAMLLLFKFTMAFLIGIGPIFILALIFDQTKDLFKKWLFYIIGTLFSMAMLSVVTAMVLEFTAKVAKAY
WAAEIIMLGNAEGLSTQALQQGGIGLLMTVLIISVPTMVAAVWEGNMGNFMHFSAFGGATASSPGPQGQPAGSYVPQQSS
RSTDRPTEVANDTPRTVSRAVGQPGSSDSIPVPGSRGNAGRNESGNA

Specific function: Unknown

COG id: COG3704

COG function: function code U; Type IV secretory pathway, VirB6 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39205; Mature: 39074

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPLADIGFGDFIFFKLVNDYFSNEIQKFGLELMRNSMRWVSTIALAVTTLWVMILGYRI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGQSRESAMATMIKAGKVAIIISIASALGANGAMLHQTLTENLDKQIHGLFTGKEGSTA
CCCCCHHHHHHHHHHCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
ADAIDENLAYTQLALTALDAVRIEPNDTEVLEKKSRAIFMASFGTASPPMAAGAMLLLFK
HHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHH
FTMAFLIGIGPIFILALIFDQTKDLFKKWLFYIIGTLFSMAMLSVVTAMVLEFTAKVAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWAAEIIMLGNAEGLSTQALQQGGIGLLMTVLIISVPTMVAAVWEGNMGNFMHFSAFGGA
HHHHHEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
TASSPGPQGQPAGSYVPQQSSRSTDRPTEVANDTPRTVSRAVGQPGSSDSIPVPGSRGNA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
GRNESGNA
CCCCCCCC
>Mature Secondary Structure 
GPLADIGFGDFIFFKLVNDYFSNEIQKFGLELMRNSMRWVSTIALAVTTLWVMILGYRI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGQSRESAMATMIKAGKVAIIISIASALGANGAMLHQTLTENLDKQIHGLFTGKEGSTA
CCCCCHHHHHHHHHHCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
ADAIDENLAYTQLALTALDAVRIEPNDTEVLEKKSRAIFMASFGTASPPMAAGAMLLLFK
HHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHH
FTMAFLIGIGPIFILALIFDQTKDLFKKWLFYIIGTLFSMAMLSVVTAMVLEFTAKVAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWAAEIIMLGNAEGLSTQALQQGGIGLLMTVLIISVPTMVAAVWEGNMGNFMHFSAFGGA
HHHHHEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
TASSPGPQGQPAGSYVPQQSSRSTDRPTEVANDTPRTVSRAVGQPGSSDSIPVPGSRGNA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
GRNESGNA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA