| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767197
Identifier: 66767197
GI number: 66767197
Start: 1043286
End: 1044632
Strand: Reverse
Name: 66767197
Synonym: XC_0865
Alternate gene names: NA
Gene position: 1044632-1043286 (Counterclockwise)
Preceding gene: 66767198
Following gene: 77761117
Centisome position: 20.29
GC content: 60.36
Gene sequence:
>1347_bases ATGAGCCTCACTAGCCAACAGTATGCAGTCCTTTCGAGAGACGTATACGACGAGCCGAAAAAGGTGGGAGAGAATAGCGA CCCTGCAAACATTGGCGGTGAGTTTTATAAGCGGCTCAAATATGTAGATAGCCCATCGGGCTATCAAGGCATCGTCTATC AGCGAGTTGATACAAAAGAGATCATCGTCGCTCACCGTGGCACAGAGACTGAGCGGCAGCTCAAAGAAGATGGTCTGTAC ACCGATGGCGGCATGGTCACGGCACGCTACAACAACCAAGCTGCCGAGGCACTTGAGTTGACCCGCTATGCGCTGAACTA TGCCCACGAATTGGGCAAGGGCGGTAAGTCTCCTCAGGTCACCGTCACTGGCCACTCGCTCGGGGGCGATCTGGCACAGG TCACGGCGCATCACTATGGCCTTAAAGGCGAGACCTTCAATGCGTACGGCGCGGTTAGCCTGGATCGCCGTATTCCCGAA GGTGGCTCGGATGTGATCAATCACGTGATGGCTGGTGATGCGGTCAGTGCTGCCAGCAAGCATTATGGTCAAGTCAAGAT CTACGCCACGCCACAAGAAGTCGCCACCTTGCAGAAGGCCGGTTACGCCAATGACCGCAGCCTGTTGGATGACCGCAATC CGGCGGTCGCCAAACCGCTTGGCGACTCGCATAGGATGCATAACTTCCTCCCTGTCGATGGCGACGGCAAGCCGGATCGC TCGGTGCTGGAAGACCCCAAATCACAGCAGCTGGCGCAGCAGTACGCGCCGATGATCGACAAGTACCGCGACGATGTGGC GCTGCTACGGGGCGGCCTGACCCTGGCATCGCGCAGGCTCCAGTCCATGGATGTGGTCGATGGCATCGATCATCTGCGCG GCCCTCTAGCTCCGGGTGCCGGCGCGGCCGAGATAGCGGCAGAGCGCTGGAAGGAAACCCAACAGCGCATGCAGCGCGAA GACGCGCCGGTCTATGTGACCCCTGGCTGGAAGCTGCCCCTGGGCAATACCCCCGAGCGCTGCGTAGATCCAGGCGCGGC GGCCATGTCTAATGATCCGCTGTACCGCTCCATCCACAGCAAACTGCCCCAAGGCACCTCCGATGCCGTGGCCATGCATG CCACCGTCGAGGCCAAACGCGCTGGCATCGTCGACATTAACCAGCTGCGCAGCGTGACCGTGCAAGACGGCAACGCCTGG ATCGTCGGCAACACGCCGGGCTTCCGGGCCAAGGTCGATCTGGCGGCGGAAGCACCGCCCGTGCAGGAAAGTTTGCGCCA GTCACAGGCTTTGGAGACGCAGCGATCGCAGGAGATGGCCCAGCCGTCGCCGACGCGTGTAATGTAA
Upstream 100 bases:
>100_bases ATGATTTTCCTGACGGTGGCGAAGCTAGGCTTGACCAATTCAATGATGACGCGCGGAAAAACATTTTCAAGGTGACCCTG ACTACTGCTAAGGTGAATCC
Downstream 100 bases:
>100_bases GGCCATGATCAAGCGGATCGCACCGATGACTGCCCCGATACCGACTGCCACTGCTGCAGGCCGGTGTGCGCCGCGCGGGA CAAGCTGGTTGGGGCCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSLTSQQYAVLSRDVYDEPKKVGENSDPANIGGEFYKRLKYVDSPSGYQGIVYQRVDTKEIIVAHRGTETERQLKEDGLY TDGGMVTARYNNQAAEALELTRYALNYAHELGKGGKSPQVTVTGHSLGGDLAQVTAHHYGLKGETFNAYGAVSLDRRIPE GGSDVINHVMAGDAVSAASKHYGQVKIYATPQEVATLQKAGYANDRSLLDDRNPAVAKPLGDSHRMHNFLPVDGDGKPDR SVLEDPKSQQLAQQYAPMIDKYRDDVALLRGGLTLASRRLQSMDVVDGIDHLRGPLAPGAGAAEIAAERWKETQQRMQRE DAPVYVTPGWKLPLGNTPERCVDPGAAAMSNDPLYRSIHSKLPQGTSDAVAMHATVEAKRAGIVDINQLRSVTVQDGNAW IVGNTPGFRAKVDLAAEAPPVQESLRQSQALETQRSQEMAQPSPTRVM
Sequences:
>Translated_448_residues MSLTSQQYAVLSRDVYDEPKKVGENSDPANIGGEFYKRLKYVDSPSGYQGIVYQRVDTKEIIVAHRGTETERQLKEDGLY TDGGMVTARYNNQAAEALELTRYALNYAHELGKGGKSPQVTVTGHSLGGDLAQVTAHHYGLKGETFNAYGAVSLDRRIPE GGSDVINHVMAGDAVSAASKHYGQVKIYATPQEVATLQKAGYANDRSLLDDRNPAVAKPLGDSHRMHNFLPVDGDGKPDR SVLEDPKSQQLAQQYAPMIDKYRDDVALLRGGLTLASRRLQSMDVVDGIDHLRGPLAPGAGAAEIAAERWKETQQRMQRE DAPVYVTPGWKLPLGNTPERCVDPGAAAMSNDPLYRSIHSKLPQGTSDAVAMHATVEAKRAGIVDINQLRSVTVQDGNAW IVGNTPGFRAKVDLAAEAPPVQESLRQSQALETQRSQEMAQPSPTRVM >Mature_447_residues SLTSQQYAVLSRDVYDEPKKVGENSDPANIGGEFYKRLKYVDSPSGYQGIVYQRVDTKEIIVAHRGTETERQLKEDGLYT DGGMVTARYNNQAAEALELTRYALNYAHELGKGGKSPQVTVTGHSLGGDLAQVTAHHYGLKGETFNAYGAVSLDRRIPEG GSDVINHVMAGDAVSAASKHYGQVKIYATPQEVATLQKAGYANDRSLLDDRNPAVAKPLGDSHRMHNFLPVDGDGKPDRS VLEDPKSQQLAQQYAPMIDKYRDDVALLRGGLTLASRRLQSMDVVDGIDHLRGPLAPGAGAAEIAAERWKETQQRMQRED APVYVTPGWKLPLGNTPERCVDPGAAAMSNDPLYRSIHSKLPQGTSDAVAMHATVEAKRAGIVDINQLRSVTVQDGNAWI VGNTPGFRAKVDLAAEAPPVQESLRQSQALETQRSQEMAQPSPTRVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48741; Mature: 48610
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTSQQYAVLSRDVYDEPKKVGENSDPANIGGEFYKRLKYVDSPSGYQGIVYQRVDTKE CCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCE IIVAHRGTETERQLKEDGLYTDGGMVTARYNNQAAEALELTRYALNYAHELGKGGKSPQV EEEEECCCCHHHHHHHCCCEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEE TVTGHSLGGDLAQVTAHHYGLKGETFNAYGAVSLDRRIPEGGSDVINHVMAGDAVSAASK EEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHCCCCCCHHHHHHHHHCCCHHHHHHH HYGQVKIYATPQEVATLQKAGYANDRSLLDDRNPAVAKPLGDSHRMHNFLPVDGDGKPDR CCCEEEEEECHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH SVLEDPKSQQLAQQYAPMIDKYRDDVALLRGGLTLASRRLQSMDVVDGIDHLRGPLAPGA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC GAAEIAAERWKETQQRMQREDAPVYVTPGWKLPLGNTPERCVDPGAAAMSNDPLYRSIHS CHHHHHHHHHHHHHHHHHHCCCCEEECCCEECCCCCCCHHHCCCCCHHCCCCHHHHHHHH KLPQGTSDAVAMHATVEAKRAGIVDINQLRSVTVQDGNAWIVGNTPGFRAKVDLAAEAPP HCCCCCCCCEEEEEEHHHHHCCCEEHHHHCEEEEECCCEEEEECCCCCEEEEEECCCCCC VQESLRQSQALETQRSQEMAQPSPTRVM HHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLTSQQYAVLSRDVYDEPKKVGENSDPANIGGEFYKRLKYVDSPSGYQGIVYQRVDTKE CCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCE IIVAHRGTETERQLKEDGLYTDGGMVTARYNNQAAEALELTRYALNYAHELGKGGKSPQV EEEEECCCCHHHHHHHCCCEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEE TVTGHSLGGDLAQVTAHHYGLKGETFNAYGAVSLDRRIPEGGSDVINHVMAGDAVSAASK EEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHCCCCCCHHHHHHHHHCCCHHHHHHH HYGQVKIYATPQEVATLQKAGYANDRSLLDDRNPAVAKPLGDSHRMHNFLPVDGDGKPDR CCCEEEEEECHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH SVLEDPKSQQLAQQYAPMIDKYRDDVALLRGGLTLASRRLQSMDVVDGIDHLRGPLAPGA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC GAAEIAAERWKETQQRMQREDAPVYVTPGWKLPLGNTPERCVDPGAAAMSNDPLYRSIHS CHHHHHHHHHHHHHHHHHHCCCCEEECCCEECCCCCCCHHHCCCCCHHCCCCHHHHHHHH KLPQGTSDAVAMHATVEAKRAGIVDINQLRSVTVQDGNAWIVGNTPGFRAKVDLAAEAPP HCCCCCCCCEEEEEEHHHHHCCCEEHHHHCEEEEECCCEEEEECCCCCEEEEEECCCCCC VQESLRQSQALETQRSQEMAQPSPTRVM HHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA