| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is add [H]
Identifier: 77761081
GI number: 77761081
Start: 360801
End: 362363
Strand: Reverse
Name: add [H]
Synonym: XC_0304
Alternate gene names: 77761081
Gene position: 362363-360801 (Counterclockwise)
Preceding gene: 66766649
Following gene: 66766647
Centisome position: 7.04
GC content: 67.56
Gene sequence:
>1563_bases ATGCTGCGTCGTTGTCTGATCCTCACCGTGTGCGCGCTGCTGCCCGCACTTGCGCAGGCGCGCCAAACGCCTGCGCCCGC ACAATCGCGCGAGCAGCAGGTTGCGCAGTTGTTTCGCGATACGGCCGGCCAATCGGCGCAACTGCGCAGTTGGTTGCAGG CCATGCCCAAAGGCGGCGACCTGCATAACCATCTCTCCGGCTCGGTGTATGCCGAGGACTACCTGCAGTGGGCCAGCGAA GACGGCGCCTGCGTGCAGCTGGACGACCTGAGCCTGCGCGCACCGCCGTGCGTGGCCGGCCAGGTGCCCGCACGCGGGCT GTCCACGCGCGATGTCGCGCTGTATGGCCGGGTGGTGGATGCCTTGTCGATGCGCAACCACCTGGCCAGCCCATCCCAAC CCACCGGGCACGGGCAGTTCTTCAGCACCTTCGGCAAGTTCGATGCGGTGGTGCGCGCACGCGTGGCCGACACCGTGGCC GCCGTGCTGGAGCAGGCCGCGCGCGACCGCGTGCCGTACGTGGAAATCATCGCCAACCCACCACAGATGGACGACGCTGC GCAGCGCATGCAGGCGCTGCCCTGGCATGGCACCGACGATGCCGCAAACCTGCGCGAACTGCAGGACGCGCTGCCACCGC TGGTGCAGGCCGCACAGCGCAACCTTGCCGACCTCGACGCGCAGGTGCGCCACGTCCTGCAGTGTGACCAGGCGCAGCCA CGCGCGGCCTGCCAGGTGCAGTACCGCTATGTGCCGTATGTGTTGCGTGTGCTGCCTGCGCCGCAGGTGTTCGGGCAGAT GGCGCTCGCCCATGCGCTCGTGGCCGCCGGCGGCAGCCGCGCGGTGGCGGTGAACATCGTCGCGCCCGAGGACAACCCGG TGGCAGTGGCCGATTACGCGCGCCACATGGCGATGTTCCGGTTCTTCGCACAGCGCTACCCCGGCGTGCCGTTGTCCTTG CATGCCGGCGAGCTGACCCTGGGCCTGGTGCCACCGGCGCAGCTGCGCTCGCATATCCGCCAGGCGGTGGATGCCGGTGC GCGGCGCATCGGTCATGGCGTGGATCTGCCTTACGAAGACGACGCGCAAGAGCTGCTGCAGCGCATGCGCCGCGACCAGG TAGCGGTGGAGATCAACCTCACCAGTAACGATGTGATCCTGGGCGTCACCGGGGCCGCGCATCCGTTGGCCATGTATCTG CGCGCGGGTGTGCCGGTGGTGCTCTCCACCGACGATGCCGGCGTGTCGCGCGCGGACATGACCCACGAATATCAACGCGC CGTGCAGGAGCAGGGCATCGAGTACCCCACGCTCAAGCAACTCGCCCGCAACGGGCTGACGTACAGCTTCCTGCCGGGCG CGAGCCTGTGGAGCGCCAACGGTAAAGCTGCGCAGGCCTGCGCCACTGCATTACAGCGCGAAACCGATGATGCTGGGTGC CAAGCATTTCGCCAGAGCAGCGAGAAGGCACGGCTGCAATGGCAGCTTGAAACCGATCTGGCGCAGTACGAGCGCATGCT GATGGAGCAGCGCAAAGTGCAGACAACACCAGCTGACGCATAA
Upstream 100 bases:
>100_bases GCAGCGCGCTGGCCGTGCAACACACTGCAAGGCAAGCTACCCCTCCGCTGGGCGCGCATGCGCGCCGGCACACCTTCTTG CGAGTTTTTTCTGTATGCCC
Downstream 100 bases:
>100_bases CCCATAGGAGCGCGCTCAGCGAAGGAGGCTTCACCGATAACGCCTCATCGCGCGCCACGTCCTACAACGCGACTTCCGCT GCATCGCCGCTGCAATACAT
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MLRRCLILTVCALLPALAQARQTPAPAQSREQQVAQLFRDTAGQSAQLRSWLQAMPKGGDLHNHLSGSVYAEDYLQWASE DGACVQLDDLSLRAPPCVAGQVPARGLSTRDVALYGRVVDALSMRNHLASPSQPTGHGQFFSTFGKFDAVVRARVADTVA AVLEQAARDRVPYVEIIANPPQMDDAAQRMQALPWHGTDDAANLRELQDALPPLVQAAQRNLADLDAQVRHVLQCDQAQP RAACQVQYRYVPYVLRVLPAPQVFGQMALAHALVAAGGSRAVAVNIVAPEDNPVAVADYARHMAMFRFFAQRYPGVPLSL HAGELTLGLVPPAQLRSHIRQAVDAGARRIGHGVDLPYEDDAQELLQRMRRDQVAVEINLTSNDVILGVTGAAHPLAMYL RAGVPVVLSTDDAGVSRADMTHEYQRAVQEQGIEYPTLKQLARNGLTYSFLPGASLWSANGKAAQACATALQRETDDAGC QAFRQSSEKARLQWQLETDLAQYERMLMEQRKVQTTPADA
Sequences:
>Translated_520_residues MLRRCLILTVCALLPALAQARQTPAPAQSREQQVAQLFRDTAGQSAQLRSWLQAMPKGGDLHNHLSGSVYAEDYLQWASE DGACVQLDDLSLRAPPCVAGQVPARGLSTRDVALYGRVVDALSMRNHLASPSQPTGHGQFFSTFGKFDAVVRARVADTVA AVLEQAARDRVPYVEIIANPPQMDDAAQRMQALPWHGTDDAANLRELQDALPPLVQAAQRNLADLDAQVRHVLQCDQAQP RAACQVQYRYVPYVLRVLPAPQVFGQMALAHALVAAGGSRAVAVNIVAPEDNPVAVADYARHMAMFRFFAQRYPGVPLSL HAGELTLGLVPPAQLRSHIRQAVDAGARRIGHGVDLPYEDDAQELLQRMRRDQVAVEINLTSNDVILGVTGAAHPLAMYL RAGVPVVLSTDDAGVSRADMTHEYQRAVQEQGIEYPTLKQLARNGLTYSFLPGASLWSANGKAAQACATALQRETDDAGC QAFRQSSEKARLQWQLETDLAQYERMLMEQRKVQTTPADA >Mature_520_residues MLRRCLILTVCALLPALAQARQTPAPAQSREQQVAQLFRDTAGQSAQLRSWLQAMPKGGDLHNHLSGSVYAEDYLQWASE DGACVQLDDLSLRAPPCVAGQVPARGLSTRDVALYGRVVDALSMRNHLASPSQPTGHGQFFSTFGKFDAVVRARVADTVA AVLEQAARDRVPYVEIIANPPQMDDAAQRMQALPWHGTDDAANLRELQDALPPLVQAAQRNLADLDAQVRHVLQCDQAQP RAACQVQYRYVPYVLRVLPAPQVFGQMALAHALVAAGGSRAVAVNIVAPEDNPVAVADYARHMAMFRFFAQRYPGVPLSL HAGELTLGLVPPAQLRSHIRQAVDAGARRIGHGVDLPYEDDAQELLQRMRRDQVAVEINLTSNDVILGVTGAAHPLAMYL RAGVPVVLSTDDAGVSRADMTHEYQRAVQEQGIEYPTLKQLARNGLTYSFLPGASLWSANGKAAQACATALQRETDDAGC QAFRQSSEKARLQWQLETDLAQYERMLMEQRKVQTTPADA
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Escherichia coli, GI1787910, Length=324, Percent_Identity=27.1604938271605, Blast_Score=72, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 56723; Mature: 56723
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRCLILTVCALLPALAQARQTPAPAQSREQQVAQLFRDTAGQSAQLRSWLQAMPKGGD CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC LHNHLSGSVYAEDYLQWASEDGACVQLDDLSLRAPPCVAGQVPARGLSTRDVALYGRVVD CHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ALSMRNHLASPSQPTGHGQFFSTFGKFDAVVRARVADTVAAVLEQAARDRVPYVEIIANP HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC PQMDDAAQRMQALPWHGTDDAANLRELQDALPPLVQAAQRNLADLDAQVRHVLQCDQAQP CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RAACQVQYRYVPYVLRVLPAPQVFGQMALAHALVAAGGSRAVAVNIVAPEDNPVAVADYA CCHHEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHH RHMAMFRFFAQRYPGVPLSLHAGELTLGLVPPAQLRSHIRQAVDAGARRIGHGVDLPYED HHHHHHHHHHHHCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DAQELLQRMRRDQVAVEINLTSNDVILGVTGAAHPLAMYLRAGVPVVLSTDDAGVSRADM CHHHHHHHHHCCCEEEEEEECCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCHHHH THEYQRAVQEQGIEYPTLKQLARNGLTYSFLPGASLWSANGKAAQACATALQRETDDAGC HHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCEECCCCHHHHHHHHHHHHCCCHHHH QAFRQSSEKARLQWQLETDLAQYERMLMEQRKVQTTPADA HHHHHCCCHHEEEEEHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLRRCLILTVCALLPALAQARQTPAPAQSREQQVAQLFRDTAGQSAQLRSWLQAMPKGGD CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC LHNHLSGSVYAEDYLQWASEDGACVQLDDLSLRAPPCVAGQVPARGLSTRDVALYGRVVD CHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ALSMRNHLASPSQPTGHGQFFSTFGKFDAVVRARVADTVAAVLEQAARDRVPYVEIIANP HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC PQMDDAAQRMQALPWHGTDDAANLRELQDALPPLVQAAQRNLADLDAQVRHVLQCDQAQP CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RAACQVQYRYVPYVLRVLPAPQVFGQMALAHALVAAGGSRAVAVNIVAPEDNPVAVADYA CCHHEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHH RHMAMFRFFAQRYPGVPLSLHAGELTLGLVPPAQLRSHIRQAVDAGARRIGHGVDLPYED HHHHHHHHHHHHCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DAQELLQRMRRDQVAVEINLTSNDVILGVTGAAHPLAMYLRAGVPVVLSTDDAGVSRADM CHHHHHHHHHCCCEEEEEEECCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCHHHH THEYQRAVQEQGIEYPTLKQLARNGLTYSFLPGASLWSANGKAAQACATALQRETDDAGC HHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCEECCCCHHHHHHHHHHHHCCCHHHH QAFRQSSEKARLQWQLETDLAQYERMLMEQRKVQTTPADA HHHHHCCCHHEEEEEHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12663927 [H]