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The map label for this gene is rmuC [H]

Identifier: 77748777

GI number: 77748777

Start: 5140541

End: 5142121

Strand: Reverse

Name: rmuC [H]

Synonym: XAC4348

Alternate gene names: 77748777

Gene position: 5142121-5140541 (Counterclockwise)

Preceding gene: 21245061

Following gene: 77748776

Centisome position: 99.35

GC content: 65.65

Gene sequence:

>1581_bases
ATGTCATCCGAATCCCTGATCCTTCTCGGGCTGCTCGTCGTAGTCCTCGTGTTGCAGCTGCTGGCGCTGCTGCGACGTCC
GTCCACCACCGCGCTGGAACATGCACTGCGCGCCGAGCAACGCGATGGCCGCGGTGAATTGCGCGAGCAACTCGAAGGCC
TGGCGCGGCAGCAGGACGCCCGCCTGGAAACCTTCGCGCGCAACCTCACCGAGCTGTCCACGCGCACCGACCAACGCCTG
GACCTGCTGCGCGATGCGCTCGGCGAAGATGCCCGCAAGGCGCGCGAAGAAAGCGGCCTTGCGCAACAACGCACCGGCGA
GCTGCTGACCCTGCGGCTCACCGAACTGCGCACCCAGCTCGAAGGCTTCGGTCAGCAACAGGAAACCCGTATCCAGGTGT
TCGGCCAGCAACTGACCGAACTGATCGCGCGCACCGACACCCACATGGCCGCGCTGCGCGATGCGCTGGCCGAAGACGCC
CGCAAGGGGCGCGAGGAAACCGGGCAATCGCAACAGCGCTTCACCGAAGCGCTGGGCCAGCGCTTGAACGAACTCACCCA
GCGCAACGAACTGCGCATCGGCGAGATGCGCGCAACGCTCGAGCAGCAGCTGGCCAATCTGCAACACGACAACGCCAGCA
AGCTCGAATTGATGCGCGCCACCGTCGATGAAAAACTGCAGACCACGCTCAATACGCGTCTGGATGCCTCGTTCAAGCTG
GTCTCCGAACGGCTGGAACAGGTGCAGCGCGGCCTGGGCGAAATGCAGCAGCTGGCCACCGGCGTGGGCGACCTCAAGCG
CGTGCTCACCAACGTCAAGGACCGCGGTGGCTGGGGCGAAGTGCAGCTGGACAACATCCTCGAGCAAACGCTGACGATGG
AGCAGTACGCGCGCGGCGTACGGGTCAAGCCCGACAGTGCCGAAGCGGTGGATTTCGCCATCCGCCTGCCCGGACGCGGC
GACGAGCAGGTGGTCTGGCTGCCGGTCGATGCCAAGTTCCCGCGCGAGGACTACGAACGCCTGATCGACGCGCAGGAAAA
GGGCGACCTCGACGCGATCAAGCAGTCGACCGCGCAACTGGAACGCGCCATCCGCATCCAGGCCAAATCGATCAGCGACA
AGTACGTCTGCCCGCCGCACACCACCGACTTCGCGGTGATGTTCCTGCCCACCGAAGGGCTGTATGCCGAAGTGATCCGC
CGTGCCGGCCTGGTCGATCTGCTGCAGCGCGAGCATCGCGTGGTGCTGGCCGGCCCCACCACGTTCACCGCCTTGCTCAA
CAGCCTGCAGATGGGCTTTCGCACGTTGGCGATCGAAAAGCGCTCCAGCGAGGTCTGGCAGGTGCTGGGCGCGGTGAAAA
GCGAGTTCGGCAAGTTCGCCGGCATTCTCGAAAAGGCCGAGCGGCAGATCAGCACCGTCGGCAAGAGCCTGGGCGAAGCC
AGCCGCAAGACCCGCACCATCGAACGCCGCCTGCGCGGGGTGGAAACACTGGCCGGCGAGCAGTCGCAGGCGTTGCTGGA
CGATGGCAGCGACGACACCGGCACCAGCAGCGAAGACGACAGCAACGACGAGCAGGCGTGA

Upstream 100 bases:

>100_bases
CGTCGCCGCTGTCTGGCTGACTCCTGCAGCGCGTGCGCATGATCACGCCGGCCAGCAGGCGTGACGCAGCTGTTGCGACA
AGCGCCGCTACACTGCGCGC

Downstream 100 bases:

>100_bases
TCGGTTGCGTAGGGCGATGCCACAAACCATGACGTAGGAGCGCACCCGGGCGCGACCAGGCATGACCGATAACGCTTCAT
CGCGCCCGGGTGCGCTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MSSESLILLGLLVVVLVLQLLALLRRPSTTALEHALRAEQRDGRGELREQLEGLARQQDARLETFARNLTELSTRTDQRL
DLLRDALGEDARKAREESGLAQQRTGELLTLRLTELRTQLEGFGQQQETRIQVFGQQLTELIARTDTHMAALRDALAEDA
RKGREETGQSQQRFTEALGQRLNELTQRNELRIGEMRATLEQQLANLQHDNASKLELMRATVDEKLQTTLNTRLDASFKL
VSERLEQVQRGLGEMQQLATGVGDLKRVLTNVKDRGGWGEVQLDNILEQTLTMEQYARGVRVKPDSAEAVDFAIRLPGRG
DEQVVWLPVDAKFPREDYERLIDAQEKGDLDAIKQSTAQLERAIRIQAKSISDKYVCPPHTTDFAVMFLPTEGLYAEVIR
RAGLVDLLQREHRVVLAGPTTFTALLNSLQMGFRTLAIEKRSSEVWQVLGAVKSEFGKFAGILEKAERQISTVGKSLGEA
SRKTRTIERRLRGVETLAGEQSQALLDDGSDDTGTSSEDDSNDEQA

Sequences:

>Translated_526_residues
MSSESLILLGLLVVVLVLQLLALLRRPSTTALEHALRAEQRDGRGELREQLEGLARQQDARLETFARNLTELSTRTDQRL
DLLRDALGEDARKAREESGLAQQRTGELLTLRLTELRTQLEGFGQQQETRIQVFGQQLTELIARTDTHMAALRDALAEDA
RKGREETGQSQQRFTEALGQRLNELTQRNELRIGEMRATLEQQLANLQHDNASKLELMRATVDEKLQTTLNTRLDASFKL
VSERLEQVQRGLGEMQQLATGVGDLKRVLTNVKDRGGWGEVQLDNILEQTLTMEQYARGVRVKPDSAEAVDFAIRLPGRG
DEQVVWLPVDAKFPREDYERLIDAQEKGDLDAIKQSTAQLERAIRIQAKSISDKYVCPPHTTDFAVMFLPTEGLYAEVIR
RAGLVDLLQREHRVVLAGPTTFTALLNSLQMGFRTLAIEKRSSEVWQVLGAVKSEFGKFAGILEKAERQISTVGKSLGEA
SRKTRTIERRLRGVETLAGEQSQALLDDGSDDTGTSSEDDSNDEQA
>Mature_525_residues
SSESLILLGLLVVVLVLQLLALLRRPSTTALEHALRAEQRDGRGELREQLEGLARQQDARLETFARNLTELSTRTDQRLD
LLRDALGEDARKAREESGLAQQRTGELLTLRLTELRTQLEGFGQQQETRIQVFGQQLTELIARTDTHMAALRDALAEDAR
KGREETGQSQQRFTEALGQRLNELTQRNELRIGEMRATLEQQLANLQHDNASKLELMRATVDEKLQTTLNTRLDASFKLV
SERLEQVQRGLGEMQQLATGVGDLKRVLTNVKDRGGWGEVQLDNILEQTLTMEQYARGVRVKPDSAEAVDFAIRLPGRGD
EQVVWLPVDAKFPREDYERLIDAQEKGDLDAIKQSTAQLERAIRIQAKSISDKYVCPPHTTDFAVMFLPTEGLYAEVIRR
AGLVDLLQREHRVVLAGPTTFTALLNSLQMGFRTLAIEKRSSEVWQVLGAVKSEFGKFAGILEKAERQISTVGKSLGEAS
RKTRTIERRLRGVETLAGEQSQALLDDGSDDTGTSSEDDSNDEQA

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 58947; Mature: 58816

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSESLILLGLLVVVLVLQLLALLRRPSTTALEHALRAEQRDGRGELREQLEGLARQQDA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RLETFARNLTELSTRTDQRLDLLRDALGEDARKAREESGLAQQRTGELLTLRLTELRTQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHH
EGFGQQQETRIQVFGQQLTELIARTDTHMAALRDALAEDARKGREETGQSQQRFTEALGQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHH
RLNELTQRNELRIGEMRATLEQQLANLQHDNASKLELMRATVDEKLQTTLNTRLDASFKL
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSERLEQVQRGLGEMQQLATGVGDLKRVLTNVKDRGGWGEVQLDNILEQTLTMEQYARGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
RVKPDSAEAVDFAIRLPGRGDEQVVWLPVDAKFPREDYERLIDAQEKGDLDAIKQSTAQL
CCCCCCCCHHEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
ERAIRIQAKSISDKYVCPPHTTDFAVMFLPTEGLYAEVIRRAGLVDLLQREHRVVLAGPT
HHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCH
TFTALLNSLQMGFRTLAIEKRSSEVWQVLGAVKSEFGKFAGILEKAERQISTVGKSLGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRKTRTIERRLRGVETLAGEQSQALLDDGSDDTGTSSEDDSNDEQA
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSESLILLGLLVVVLVLQLLALLRRPSTTALEHALRAEQRDGRGELREQLEGLARQQDA
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RLETFARNLTELSTRTDQRLDLLRDALGEDARKAREESGLAQQRTGELLTLRLTELRTQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHH
EGFGQQQETRIQVFGQQLTELIARTDTHMAALRDALAEDARKGREETGQSQQRFTEALGQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHH
RLNELTQRNELRIGEMRATLEQQLANLQHDNASKLELMRATVDEKLQTTLNTRLDASFKL
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSERLEQVQRGLGEMQQLATGVGDLKRVLTNVKDRGGWGEVQLDNILEQTLTMEQYARGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
RVKPDSAEAVDFAIRLPGRGDEQVVWLPVDAKFPREDYERLIDAQEKGDLDAIKQSTAQL
CCCCCCCCHHEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
ERAIRIQAKSISDKYVCPPHTTDFAVMFLPTEGLYAEVIRRAGLVDLLQREHRVVLAGPT
HHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCH
TFTALLNSLQMGFRTLAIEKRSSEVWQVLGAVKSEFGKFAGILEKAERQISTVGKSLGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRKTRTIERRLRGVETLAGEQSQALLDDGSDDTGTSSEDDSNDEQA
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]