Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is 77748731

Identifier: 77748731

GI number: 77748731

Start: 4255252

End: 4256640

Strand: Direct

Name: 77748731

Synonym: XAC3589

Alternate gene names: NA

Gene position: 4255252-4256640 (Clockwise)

Preceding gene: 21244313

Following gene: 77748732

Centisome position: 82.22

GC content: 60.91

Gene sequence:

>1389_bases
GTGGATCTGGATGGCACGCTTTTGAATTCGGACATTCTCTATGAGTCGGTGCTGGCGTTGCTGGCGCGAAACCCACTGTA
CGTGTTCTTGCTGCCACTGTGGCTGTTGCGTGGCAAGGCCGCGCTGAAGCGCGAACTTGCGTCCCGCGTCGTCCTGCCTG
CAGAGACCTTGCCCTACAACCACCAGGTGCTAGAGCTGTTGCGCACCACGACGCAACGCCCGCGCGCGTTGTGCACCGCC
TCCGACGCACTCCTGGTGCAGCCTATTGCAGAGCACCTGGGCCTCTTCGAGCAGGTCATTGCCAGCGATGGCAAGCGCAA
TCTGTCCGGTCGCAACAAGGCAGAGGTGCTGGTCGACGCGTTTGGTCAGGGCAATTTCGATTACGCGGGCAACGGCAGCG
TGGATTTGCACGTCTGGGACAAGGCCGGGGGCGCCTGGGTCGTCAACAACGGCACCGCACTGGCAAAGGCAGCGGCGCAA
CGGACGACCGTGCATGCGCATTGGCCTGCCCCGTCGCGCGCCCGCGCCTGGCTGAAGGCGTTGCGCCTGCATCAGTGGCT
GAAGAATCTGCTCGTGTTCGTTCCGCTGCTGACCGCGCACCGATTCCTGGATCTGGAATCGGTCCTGCAATCCACGATTG
CGCTGGTCGCATTCGGGTTATGCGCTTCCGGCGTCTATGTGCTCAATGATCTGCTGGACTTGACGCCTGACCGTCAGCAT
CCGCGCAAGCGCAAGCGCCCGTTTGCGGCAGGTCGCCTCCCGCTTTTGCATGGCCTGCTGGTTGCCCCTGCACTGACAGT
GGCAGGTCTCCTGCTGTCGCTGGCATGCAACATTGAATTCACCCTGGTGTTGCTTGCTTACTACGTCATGACCTTGGCGT
ATTCGCTACGCTTGAAGCGCATTGTGATGATCGACGTGGTGCTGCTCGCAGCGCTCTACACCGTACGCATCATCGGTGGC
GCCGTGGCGATCGATATCGAGCTGTCGTTCTGGCTGTTGGCATTTTCGATGTTCATGTTCCTGTCGCTCGCGCTGCTCAA
GCGCTACACGGAGCTGCATGCCATGCTGAGCAGCGGCAAGACCAGGGCCAGTGGCCGAGCCTATTCGGTGGAGGACCTCT
CGCTGTTGCAATCCATGGGTGCTGCCGCCGGCTACATCGCGGTGATGGTGATGGCGCTTTACATCAACAGTCCCGAGAGC
GTGGAGCTATACCGCAATCCCAAGCTGCTCTGGCTGGTGTGCCCGGTGTTGCTGTATTGGGTGAGCAGGGTCTGGATCAT
TGCTCATCGTGGAGAAATGCATGACGACCCGATCGTATTCGCTGCCACCGACCGCGTCAGTCAGATCGTGGTGGTGCTGT
GCGGGTTATTCGCCCTGAGCGCCATCTGA

Upstream 100 bases:

>100_bases
GACAGGTATAATCGGCGCCCCGCAATGGATCGCCAGGCAGTCGATGTCCGCCCCTACCAACAGCACCACCCGTCCAGTTG
TGTCGGGACGCGCCTTGTGC

Downstream 100 bases:

>100_bases
TGGCGCCGGGGCAATCCTGGGGGCGGTATCCCAGCGCGCAGCAGACGCTGCTACCGATCAACGATCGAGCGGCGAATCTG
CCCGCATTCGACGGCTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MDLDGTLLNSDILYESVLALLARNPLYVFLLPLWLLRGKAALKRELASRVVLPAETLPYNHQVLELLRTTTQRPRALCTA
SDALLVQPIAEHLGLFEQVIASDGKRNLSGRNKAEVLVDAFGQGNFDYAGNGSVDLHVWDKAGGAWVVNNGTALAKAAAQ
RTTVHAHWPAPSRARAWLKALRLHQWLKNLLVFVPLLTAHRFLDLESVLQSTIALVAFGLCASGVYVLNDLLDLTPDRQH
PRKRKRPFAAGRLPLLHGLLVAPALTVAGLLLSLACNIEFTLVLLAYYVMTLAYSLRLKRIVMIDVVLLAALYTVRIIGG
AVAIDIELSFWLLAFSMFMFLSLALLKRYTELHAMLSSGKTRASGRAYSVEDLSLLQSMGAAAGYIAVMVMALYINSPES
VELYRNPKLLWLVCPVLLYWVSRVWIIAHRGEMHDDPIVFAATDRVSQIVVVLCGLFALSAI

Sequences:

>Translated_462_residues
MDLDGTLLNSDILYESVLALLARNPLYVFLLPLWLLRGKAALKRELASRVVLPAETLPYNHQVLELLRTTTQRPRALCTA
SDALLVQPIAEHLGLFEQVIASDGKRNLSGRNKAEVLVDAFGQGNFDYAGNGSVDLHVWDKAGGAWVVNNGTALAKAAAQ
RTTVHAHWPAPSRARAWLKALRLHQWLKNLLVFVPLLTAHRFLDLESVLQSTIALVAFGLCASGVYVLNDLLDLTPDRQH
PRKRKRPFAAGRLPLLHGLLVAPALTVAGLLLSLACNIEFTLVLLAYYVMTLAYSLRLKRIVMIDVVLLAALYTVRIIGG
AVAIDIELSFWLLAFSMFMFLSLALLKRYTELHAMLSSGKTRASGRAYSVEDLSLLQSMGAAAGYIAVMVMALYINSPES
VELYRNPKLLWLVCPVLLYWVSRVWIIAHRGEMHDDPIVFAATDRVSQIVVVLCGLFALSAI
>Mature_462_residues
MDLDGTLLNSDILYESVLALLARNPLYVFLLPLWLLRGKAALKRELASRVVLPAETLPYNHQVLELLRTTTQRPRALCTA
SDALLVQPIAEHLGLFEQVIASDGKRNLSGRNKAEVLVDAFGQGNFDYAGNGSVDLHVWDKAGGAWVVNNGTALAKAAAQ
RTTVHAHWPAPSRARAWLKALRLHQWLKNLLVFVPLLTAHRFLDLESVLQSTIALVAFGLCASGVYVLNDLLDLTPDRQH
PRKRKRPFAAGRLPLLHGLLVAPALTVAGLLLSLACNIEFTLVLLAYYVMTLAYSLRLKRIVMIDVVLLAALYTVRIIGG
AVAIDIELSFWLLAFSMFMFLSLALLKRYTELHAMLSSGKTRASGRAYSVEDLSLLQSMGAAAGYIAVMVMALYINSPES
VELYRNPKLLWLVCPVLLYWVSRVWIIAHRGEMHDDPIVFAATDRVSQIVVVLCGLFALSAI

Specific function: Possible permease/transporter [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 51007; Mature: 51007

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLDGTLLNSDILYESVLALLARNPLYVFLLPLWLLRGKAALKRELASRVVLPAETLPYN
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCCCCC
HQVLELLRTTTQRPRALCTASDALLVQPIAEHLGLFEQVIASDGKRNLSGRNKAEVLVDA
HHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
FGQGNFDYAGNGSVDLHVWDKAGGAWVVNNGTALAKAAAQRTTVHAHWPAPSRARAWLKA
CCCCCCCCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHCEEEEECCCCHHHHHHHHH
LRLHQWLKNLLVFVPLLTAHRFLDLESVLQSTIALVAFGLCASGVYVLNDLLDLTPDRQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PRKRKRPFAAGRLPLLHGLLVAPALTVAGLLLSLACNIEFTLVLLAYYVMTLAYSLRLKR
CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IVMIDVVLLAALYTVRIIGGAVAIDIELSFWLLAFSMFMFLSLALLKRYTELHAMLSSGK
HHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TRASGRAYSVEDLSLLQSMGAAAGYIAVMVMALYINSPESVELYRNPKLLWLVCPVLLYW
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHH
VSRVWIIAHRGEMHDDPIVFAATDRVSQIVVVLCGLFALSAI
HHHHHEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLDGTLLNSDILYESVLALLARNPLYVFLLPLWLLRGKAALKRELASRVVLPAETLPYN
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCCCCC
HQVLELLRTTTQRPRALCTASDALLVQPIAEHLGLFEQVIASDGKRNLSGRNKAEVLVDA
HHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
FGQGNFDYAGNGSVDLHVWDKAGGAWVVNNGTALAKAAAQRTTVHAHWPAPSRARAWLKA
CCCCCCCCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHCEEEEECCCCHHHHHHHHH
LRLHQWLKNLLVFVPLLTAHRFLDLESVLQSTIALVAFGLCASGVYVLNDLLDLTPDRQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PRKRKRPFAAGRLPLLHGLLVAPALTVAGLLLSLACNIEFTLVLLAYYVMTLAYSLRLKR
CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IVMIDVVLLAALYTVRIIGGAVAIDIELSFWLLAFSMFMFLSLALLKRYTELHAMLSSGK
HHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TRASGRAYSVEDLSLLQSMGAAAGYIAVMVMALYINSPESVELYRNPKLLWLVCPVLLYW
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHH
VSRVWIIAHRGEMHDDPIVFAATDRVSQIVVVLCGLFALSAI
HHHHHEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]