| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748707
Identifier: 77748707
GI number: 77748707
Start: 3774657
End: 3775940
Strand: Reverse
Name: 77748707
Synonym: XAC3208
Alternate gene names: NA
Gene position: 3775940-3774657 (Counterclockwise)
Preceding gene: 21243940
Following gene: 21243932
Centisome position: 72.96
GC content: 66.28
Gene sequence:
>1284_bases GTGGCGCGCGTTTCTGGACAAGGAAGTGACACCGCGCTTTCCGGATGGCCTGACCGTGTTCGACGCCTACGGCCAATGGT TGTTCCGCGGCGCCAAGGAGCCGAACCGGCTGGGGACCAAGGTACTGGTGATCCTGCACGAAGACACCCCGCAACGGCGC AACGACATCGAAGCGATCCGGCTGGCCTGGAAGCAGGCCACCGGGCACCAGTCGGTGCCGTGGTCGCGGCAGCCGGTGGA GGTCTCGTTCTGAGTCGGCTGGCCGGCTTGCGCACTGCCAGGTCCGTGCGGTTGCCGGCCGCCACGCTCACCAGCGTCGA TCGGCGTCTGTCGCGCGTCCTTCGGCATTGGCGCCCATCGCGTGCGCAGCCGGGGTGCGGGTGTTTGCCCACTGTTCCGA ACCAGCTGCGCATGTGCTTCACCTCGTTGCATTTGCCTTCCATCCGCGCCGCTTGCGCACTGTTGATTGCGATGGCAGGC GGGCTGGCGTTCGGCGCTGCGGCAGACGACACACGCCTTCGCTTAACACTGGATGCGCAGACCCGTGCGACCGCCGCCTT GGTCGGCCAGCGCCTGCATGTGGTGCTGTCTCCCGGCGATGCCGAACAGTGGTTCGACGCGAATGTGGACGATGGCGAAG GCGGCGTGCAGCTGCGCAGCGACGACTACAACTTCGACGGGCGCCCGGATCTTGCGGTGTCGGCGATGCTGGGTCAGGTC AACGAGGCGGTCTGGGTCTTTGTGTTCGATCCTGCACGGCGCCGCTTTCATGCGCTCGCTGCACCGACGCGCCCGGCGGT GCAGTGCGAAGGATTCTTCAATCTGGTTGCCGATCAACAGCAGCGCAGTCTGACCAGTTCCTGCCGCGGTGGGCCGATGT GGTATGCCGATGTCTACCGCTACGACGCTGGCGGGCGGTTGTACGTTTGGCGGACGCAGCAGCGGATCGAGTCGCCGCAG ATCCAGACCTTGCTGGAGTCGGGAAGCGAGGATGGCATGCCGTTGTCGGTGTGGCCGATGTACGACCCGCGTGGCGTCAA GGTGGCAAGCGAAATCGGCACCACGCTCGAGGAACCCATGCCGGTGCAACTGCACGTACAGGTGACGCGTTTGCCGCTGT ACGCCACGCCGACGGCCACCGCCACCAAACGCTATCTGGTGCGCGGCGATCAGGCCGATGCGCTGGACGTCAGCGCCGAT GGCGCGCGGCTGCAGGTGCGTTATCGCAGTGCCGGCCGCAGCGACAGCGTGGGCTGGATCGATGTGGATGCGGCGATGCA GTAG
Upstream 100 bases:
>100_bases CGGCGGCACGGGGTTGGGTGCGCAGCGAGTTGTATTTCGGCGTGGGCGAAGAATCCGGCCCGGCCGACCGCCCACAGACT CGCACCATCGACGAAACCCA
Downstream 100 bases:
>100_bases CGGGCGATGGCGCCGGGCTGCCTGCTCGCGGACAGCCCGATGGCCTCTGGCCACGACACGCTCTGATCCACCGCGCCGCT GTCGCCCCTGCAGTGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MARVSGQGSDTALSGWPDRVRRLRPMVVPRRQGAEPAGDQGTGDPARRHPATAQRHRSDPAGLEAGHRAPVGAVVAAAGG GLVLSRLAGLRTARSVRLPAATLTSVDRRLSRVLRHWRPSRAQPGCGCLPTVPNQLRMCFTSLHLPSIRAACALLIAMAG GLAFGAAADDTRLRLTLDAQTRATAALVGQRLHVVLSPGDAEQWFDANVDDGEGGVQLRSDDYNFDGRPDLAVSAMLGQV NEAVWVFVFDPARRRFHALAAPTRPAVQCEGFFNLVADQQQRSLTSSCRGGPMWYADVYRYDAGGRLYVWRTQQRIESPQ IQTLLESGSEDGMPLSVWPMYDPRGVKVASEIGTTLEEPMPVQLHVQVTRLPLYATPTATATKRYLVRGDQADALDVSAD GARLQVRYRSAGRSDSVGWIDVDAAMQ
Sequences:
>Translated_427_residues MARVSGQGSDTALSGWPDRVRRLRPMVVPRRQGAEPAGDQGTGDPARRHPATAQRHRSDPAGLEAGHRAPVGAVVAAAGG GLVLSRLAGLRTARSVRLPAATLTSVDRRLSRVLRHWRPSRAQPGCGCLPTVPNQLRMCFTSLHLPSIRAACALLIAMAG GLAFGAAADDTRLRLTLDAQTRATAALVGQRLHVVLSPGDAEQWFDANVDDGEGGVQLRSDDYNFDGRPDLAVSAMLGQV NEAVWVFVFDPARRRFHALAAPTRPAVQCEGFFNLVADQQQRSLTSSCRGGPMWYADVYRYDAGGRLYVWRTQQRIESPQ IQTLLESGSEDGMPLSVWPMYDPRGVKVASEIGTTLEEPMPVQLHVQVTRLPLYATPTATATKRYLVRGDQADALDVSAD GARLQVRYRSAGRSDSVGWIDVDAAMQ >Mature_426_residues ARVSGQGSDTALSGWPDRVRRLRPMVVPRRQGAEPAGDQGTGDPARRHPATAQRHRSDPAGLEAGHRAPVGAVVAAAGGG LVLSRLAGLRTARSVRLPAATLTSVDRRLSRVLRHWRPSRAQPGCGCLPTVPNQLRMCFTSLHLPSIRAACALLIAMAGG LAFGAAADDTRLRLTLDAQTRATAALVGQRLHVVLSPGDAEQWFDANVDDGEGGVQLRSDDYNFDGRPDLAVSAMLGQVN EAVWVFVFDPARRRFHALAAPTRPAVQCEGFFNLVADQQQRSLTSSCRGGPMWYADVYRYDAGGRLYVWRTQQRIESPQI QTLLESGSEDGMPLSVWPMYDPRGVKVASEIGTTLEEPMPVQLHVQVTRLPLYATPTATATKRYLVRGDQADALDVSADG ARLQVRYRSAGRSDSVGWIDVDAAMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46231; Mature: 46100
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVSGQGSDTALSGWPDRVRRLRPMVVPRRQGAEPAGDQGTGDPARRHPATAQRHRSDP CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCC AGLEAGHRAPVGAVVAAAGGGLVLSRLAGLRTARSVRLPAATLTSVDRRLSRVLRHWRPS CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCC RAQPGCGCLPTVPNQLRMCFTSLHLPSIRAACALLIAMAGGLAFGAAADDTRLRLTLDAQ CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCCCEEEEEECCC TRATAALVGQRLHVVLSPGDAEQWFDANVDDGEGGVQLRSDDYNFDGRPDLAVSAMLGQV HHHHHHHHCCEEEEEECCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCC NEAVWVFVFDPARRRFHALAAPTRPAVQCEGFFNLVADQQQRSLTSSCRGGPMWYADVYR CCEEEEEEECHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE YDAGGRLYVWRTQQRIESPQIQTLLESGSEDGMPLSVWPMYDPRGVKVASEIGTTLEEPM ECCCCEEEEEECHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCEEHHHHCHHHCCCC PVQLHVQVTRLPLYATPTATATKRYLVRGDQADALDVSADGARLQVRYRSAGRSDSVGWI CEEEEEEEEEEEEEECCCCHHHHHHEEECCCCCEEEECCCCCEEEEEEECCCCCCCCCEE DVDAAMQ EECCCCC >Mature Secondary Structure ARVSGQGSDTALSGWPDRVRRLRPMVVPRRQGAEPAGDQGTGDPARRHPATAQRHRSDP CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCC AGLEAGHRAPVGAVVAAAGGGLVLSRLAGLRTARSVRLPAATLTSVDRRLSRVLRHWRPS CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCC RAQPGCGCLPTVPNQLRMCFTSLHLPSIRAACALLIAMAGGLAFGAAADDTRLRLTLDAQ CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCCCEEEEEECCC TRATAALVGQRLHVVLSPGDAEQWFDANVDDGEGGVQLRSDDYNFDGRPDLAVSAMLGQV HHHHHHHHCCEEEEEECCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCC NEAVWVFVFDPARRRFHALAAPTRPAVQCEGFFNLVADQQQRSLTSSCRGGPMWYADVYR CCEEEEEEECHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE YDAGGRLYVWRTQQRIESPQIQTLLESGSEDGMPLSVWPMYDPRGVKVASEIGTTLEEPM ECCCCEEEEEECHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCEEHHHHCHHHCCCC PVQLHVQVTRLPLYATPTATATKRYLVRGDQADALDVSADGARLQVRYRSAGRSDSVGWI CEEEEEEEEEEEEEECCCCHHHHHHEEECCCCCEEEECCCCCEEEEEEECCCCCCCCCEE DVDAAMQ EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA