| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748666
Identifier: 77748666
GI number: 77748666
Start: 3060484
End: 3062670
Strand: Reverse
Name: 77748666
Synonym: XAC2598
Alternate gene names: NA
Gene position: 3062670-3060484 (Counterclockwise)
Preceding gene: 21243332
Following gene: 21243328
Centisome position: 59.18
GC content: 66.12
Gene sequence:
>2187_bases ATGTTGAAGATGATCTGCATGGCTGCAACGCTGGGCGTTGCGGCAAGCTCGCCGGCACTGGCCGACGAACTGGAATTTCA AGGACGCCGGGCCCAAGCGCAGGCGTTGGACGATGGCAGCTTCGTGTTGCGCTGGCCGCAAGGCGAACGCCGCATTGCGG CACAACCGATGCGCACGCACACCGCCAGCCCGCTGTTCGACGCCTTGTTCGCGCTGGCACAGCAGGAAATGGCCGATGAC CGGGTCGAGGCGATCCGCGACCCCGCCTTCAACGCTGGCAAGCCGGTGCCGTGCGCCTGCTTCGAAACCGGCGAGCGCTG GCCCTACGTGTGGACGCGCGATGTCAGTTTTGCGGCCGATCTTGCGTTGGCGCAGCTGGAGCCGGAGCGCACGCGCAACG CACTGCGCTTCAAGCTCTCTGCCGCACGCGATGGGCGCACGCCGGGACTGTTCGTGGCGCAGGACACCGGCTCCGGCGGC AGTTGGCCGATCAGTAGCGACCGAGTGGTGTGGTTCTTTGCCGCACGCGGCCTGCTGGACGACAAACCGTTTGCCGAAGA GGTCTGGCAGGCGCTACAGGCAACGATCGCGCAGGACCGCCATGCCGTGTTCGATGCGCAGATCGGCCTCTACCGCGGCG AAACCTCGTTTCTGGATTGGCGAGAACAGACCTACCCGGACTGGACGCGCGAGGACGTGCGCTTCATTGCCGAATCCTTT GCGCTCTCCACCAACGTGCTGCATTACCAGGCATTGCGGCTGGCCGAACAGTTGGCGCGCCAGCATGGCGATGCACGCGC TGCGCAGTACGCGCAGTGGGCCGATGCACTGCGCCAGGCCATCGACGGGCGTTTCTGGGATGCGCGCAGCAGCCAATACG TCAGCTATCTCGGCAGCGCAGCGCATCCGGTGCGCTACGCCAAGGTGGATCTGCTCGGCCTCTCGCTAGGCGTGCTGGCC GATGTGTTTCCGCCACAGCGGGCACGCCTTGCGTTGCGCAATTACCCGATGGTCGCGGGTGGCAGCCCGGTTGTGTGGCC GCAAGAGGCCGCGCAGCCGATCTACCACAACCGCGCTGTCTGGCCGTTCGTCAGTGCCTATGCGCTACGCGCCGCACGCG CGCTGGACGATGCGCCACGCATCGCGTTGGAGCTGCAATCGCTGATGCGCGGTAGCGCGCTGGCGGGCTCCAACATGGAA AACTACGAGATGCAGAGCCTTGCGGTGCACGTGGAAGAGGGCGCACGCAGTGGTCCGGTGGTGAACTCGCCACGCCAGCT GTGGTCGGTGGCGGGCTATCTGTCTGCAGTGCGGGAGGGTGTGTTCGGCCTGTCGGCCGCTGGCAACGTACAGCCGAAGT TGCCGCGGTCCTTGCTACCCCTGTTGTTTGGCGAGGCCAAGCAGATCGTGCTGGAACAGGGCGCACGCCGTTACGTGCTG CAGCGCCCGGCGAACGATACCGGTGAGTTGCTGGTGGCAGGACGCATCGAACGGCAGGGTCAGACCACGCTGGTGCAGTT GGTTGGGCGCAATGCCGACCTCACGCCGCCGCCGCGACCGGAGCAGGTGTTCGCACCGCAGACGCCACAGGCGCCGGTCG CGCAACAGCTCGGCAACACGTATCGCATCGGTATTCCGGAAGGAACAACGCTGTATCTGGACGGCCGCGCACTCGATGCC AGCGCGCACTGGGATCTTCCCGACGATGGCGTGTTGCATATGCTCAGCCTGACCCGGCGGCGCGATGGTCTGGAGTCGCT GCATAGCCCATCGTTGACGCTCGGCCCACTGCAGCGGTTGCCAGGCAGCCAGCGCTGGAGCTGGCGTCCCGCACGTGCAG GCGTGCATCGGGTGTCGCTGCGGTACCGCAACGACAACGGCCCGATCAATACCGGGGTCACCGCCGCGGTCAAACAGCTG GTGCTGGAATGCCCAGGCAAACCCGCGCAATCGCAGGTCATCGTGATGCCGCATAGCGTGGGCGAGCAGCTCTCCACGCA GGTCACTTTCGATGCGGTGGCGGGGCAGGCCTGCACGTTCCGGCTAGAGAACGGCTTCAACATGAGCGCGTTGGCGCACT TTGCGCGGTACAACGGCGGTCGCGGCGGCCGCGATGGCGTGGTCAACGCTGCGCAGGTCAGTGCGTTGTTGGTCGGGCCT GCAGCACGCGTGGAGGTTGCGCCATGA
Upstream 100 bases:
>100_bases GCACTTGGGAGGGTCCGCGCCCGTGGCACGTCCGTGCCGCGCACCACAACGCGTGCAACGAGGGAGGAAGGCCGACGGCG CAAGCTGTCTTGCCGCTTCG
Downstream 100 bases:
>100_bases CCGCCAAGCCACGCTTGGATTTTTGGCAGATCTGGAACATGTGCTTCGGCTTTCTCGGCATCCAGTTCGGCTTCGCACTG CAGAACGCCAATGCCAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 728; Mature: 728
Protein sequence:
>728_residues MLKMICMAATLGVAASSPALADELEFQGRRAQAQALDDGSFVLRWPQGERRIAAQPMRTHTASPLFDALFALAQQEMADD RVEAIRDPAFNAGKPVPCACFETGERWPYVWTRDVSFAADLALAQLEPERTRNALRFKLSAARDGRTPGLFVAQDTGSGG SWPISSDRVVWFFAARGLLDDKPFAEEVWQALQATIAQDRHAVFDAQIGLYRGETSFLDWREQTYPDWTREDVRFIAESF ALSTNVLHYQALRLAEQLARQHGDARAAQYAQWADALRQAIDGRFWDARSSQYVSYLGSAAHPVRYAKVDLLGLSLGVLA DVFPPQRARLALRNYPMVAGGSPVVWPQEAAQPIYHNRAVWPFVSAYALRAARALDDAPRIALELQSLMRGSALAGSNME NYEMQSLAVHVEEGARSGPVVNSPRQLWSVAGYLSAVREGVFGLSAAGNVQPKLPRSLLPLLFGEAKQIVLEQGARRYVL QRPANDTGELLVAGRIERQGQTTLVQLVGRNADLTPPPRPEQVFAPQTPQAPVAQQLGNTYRIGIPEGTTLYLDGRALDA SAHWDLPDDGVLHMLSLTRRRDGLESLHSPSLTLGPLQRLPGSQRWSWRPARAGVHRVSLRYRNDNGPINTGVTAAVKQL VLECPGKPAQSQVIVMPHSVGEQLSTQVTFDAVAGQACTFRLENGFNMSALAHFARYNGGRGGRDGVVNAAQVSALLVGP AARVEVAP
Sequences:
>Translated_728_residues MLKMICMAATLGVAASSPALADELEFQGRRAQAQALDDGSFVLRWPQGERRIAAQPMRTHTASPLFDALFALAQQEMADD RVEAIRDPAFNAGKPVPCACFETGERWPYVWTRDVSFAADLALAQLEPERTRNALRFKLSAARDGRTPGLFVAQDTGSGG SWPISSDRVVWFFAARGLLDDKPFAEEVWQALQATIAQDRHAVFDAQIGLYRGETSFLDWREQTYPDWTREDVRFIAESF ALSTNVLHYQALRLAEQLARQHGDARAAQYAQWADALRQAIDGRFWDARSSQYVSYLGSAAHPVRYAKVDLLGLSLGVLA DVFPPQRARLALRNYPMVAGGSPVVWPQEAAQPIYHNRAVWPFVSAYALRAARALDDAPRIALELQSLMRGSALAGSNME NYEMQSLAVHVEEGARSGPVVNSPRQLWSVAGYLSAVREGVFGLSAAGNVQPKLPRSLLPLLFGEAKQIVLEQGARRYVL QRPANDTGELLVAGRIERQGQTTLVQLVGRNADLTPPPRPEQVFAPQTPQAPVAQQLGNTYRIGIPEGTTLYLDGRALDA SAHWDLPDDGVLHMLSLTRRRDGLESLHSPSLTLGPLQRLPGSQRWSWRPARAGVHRVSLRYRNDNGPINTGVTAAVKQL VLECPGKPAQSQVIVMPHSVGEQLSTQVTFDAVAGQACTFRLENGFNMSALAHFARYNGGRGGRDGVVNAAQVSALLVGP AARVEVAP >Mature_728_residues MLKMICMAATLGVAASSPALADELEFQGRRAQAQALDDGSFVLRWPQGERRIAAQPMRTHTASPLFDALFALAQQEMADD RVEAIRDPAFNAGKPVPCACFETGERWPYVWTRDVSFAADLALAQLEPERTRNALRFKLSAARDGRTPGLFVAQDTGSGG SWPISSDRVVWFFAARGLLDDKPFAEEVWQALQATIAQDRHAVFDAQIGLYRGETSFLDWREQTYPDWTREDVRFIAESF ALSTNVLHYQALRLAEQLARQHGDARAAQYAQWADALRQAIDGRFWDARSSQYVSYLGSAAHPVRYAKVDLLGLSLGVLA DVFPPQRARLALRNYPMVAGGSPVVWPQEAAQPIYHNRAVWPFVSAYALRAARALDDAPRIALELQSLMRGSALAGSNME NYEMQSLAVHVEEGARSGPVVNSPRQLWSVAGYLSAVREGVFGLSAAGNVQPKLPRSLLPLLFGEAKQIVLEQGARRYVL QRPANDTGELLVAGRIERQGQTTLVQLVGRNADLTPPPRPEQVFAPQTPQAPVAQQLGNTYRIGIPEGTTLYLDGRALDA SAHWDLPDDGVLHMLSLTRRRDGLESLHSPSLTLGPLQRLPGSQRWSWRPARAGVHRVSLRYRNDNGPINTGVTAAVKQL VLECPGKPAQSQVIVMPHSVGEQLSTQVTFDAVAGQACTFRLENGFNMSALAHFARYNGGRGGRDGVVNAAQVSALLVGP AARVEVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79696; Mature: 79696
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKMICMAATLGVAASSPALADELEFQGRRAQAQALDDGSFVLRWPQGERRIAAQPMRTH CCHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCCCCCCCHHHC TASPLFDALFALAQQEMADDRVEAIRDPAFNAGKPVPCACFETGERWPYVWTRDVSFAAD CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEECCCHHHHH LALAQLEPERTRNALRFKLSAARDGRTPGLFVAQDTGSGGSWPISSDRVVWFFAARGLLD HHHHHCCCHHHHHHEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCC DKPFAEEVWQALQATIAQDRHAVFDAQIGLYRGETSFLDWREQTYPDWTREDVRFIAESF CCCHHHHHHHHHHHHHHHHHHHHEEHHEEEEECCCCHHCCHHHCCCCCCHHHHHHHHHHH ALSTNVLHYQALRLAEQLARQHGDARAAQYAQWADALRQAIDGRFWDARSSQYVSYLGSA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC AHPVRYAKVDLLGLSLGVLADVFPPQRARLALRNYPMVAGGSPVVWPQEAAQPIYHNRAV CCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCCCCHHHCCCHHCCCCH WPFVSAYALRAARALDDAPRIALELQSLMRGSALAGSNMENYEMQSLAVHVEEGARSGPV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEEECCCCCCCCC VNSPRQLWSVAGYLSAVREGVFGLSAAGNVQPKLPRSLLPLLFGEAKQIVLEQGARRYVL CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHH QRPANDTGELLVAGRIERQGQTTLVQLVGRNADLTPPPRPEQVFAPQTPQAPVAQQLGNT CCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCE YRIGIPEGTTLYLDGRALDASAHWDLPDDGVLHMLSLTRRRDGLESLHSPSLTLGPLQRL EEEECCCCCEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHC PGSQRWSWRPARAGVHRVSLRYRNDNGPINTGVTAAVKQLVLECPGKPAQSQVIVMPHSV CCCCCCCCCHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECHHH GEQLSTQVTFDAVAGQACTFRLENGFNMSALAHFARYNGGRGGRDGVVNAAQVSALLVGP CHHHHHEEEHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEECC AARVEVAP CCEEEECC >Mature Secondary Structure MLKMICMAATLGVAASSPALADELEFQGRRAQAQALDDGSFVLRWPQGERRIAAQPMRTH CCHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCCCCCCCHHHC TASPLFDALFALAQQEMADDRVEAIRDPAFNAGKPVPCACFETGERWPYVWTRDVSFAAD CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEECCCHHHHH LALAQLEPERTRNALRFKLSAARDGRTPGLFVAQDTGSGGSWPISSDRVVWFFAARGLLD HHHHHCCCHHHHHHEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCC DKPFAEEVWQALQATIAQDRHAVFDAQIGLYRGETSFLDWREQTYPDWTREDVRFIAESF CCCHHHHHHHHHHHHHHHHHHHHEEHHEEEEECCCCHHCCHHHCCCCCCHHHHHHHHHHH ALSTNVLHYQALRLAEQLARQHGDARAAQYAQWADALRQAIDGRFWDARSSQYVSYLGSA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC AHPVRYAKVDLLGLSLGVLADVFPPQRARLALRNYPMVAGGSPVVWPQEAAQPIYHNRAV CCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCCCCHHHCCCHHCCCCH WPFVSAYALRAARALDDAPRIALELQSLMRGSALAGSNMENYEMQSLAVHVEEGARSGPV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEEECCCCCCCCC VNSPRQLWSVAGYLSAVREGVFGLSAAGNVQPKLPRSLLPLLFGEAKQIVLEQGARRYVL CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHH QRPANDTGELLVAGRIERQGQTTLVQLVGRNADLTPPPRPEQVFAPQTPQAPVAQQLGNT CCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCE YRIGIPEGTTLYLDGRALDASAHWDLPDDGVLHMLSLTRRRDGLESLHSPSLTLGPLQRL EEEECCCCCEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHC PGSQRWSWRPARAGVHRVSLRYRNDNGPINTGVTAAVKQLVLECPGKPAQSQVIVMPHSV CCCCCCCCCHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECHHH GEQLSTQVTFDAVAGQACTFRLENGFNMSALAHFARYNGGRGGRDGVVNAAQVSALLVGP CHHHHHEEEHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEECC AARVEVAP CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA