| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is suc1
Identifier: 21243328
GI number: 21243328
Start: 3059009
End: 3060487
Strand: Reverse
Name: suc1
Synonym: XAC2597
Alternate gene names: NA
Gene position: 3060487-3059009 (Counterclockwise)
Preceding gene: 77748666
Following gene: 21243327
Centisome position: 59.13
GC content: 63.56
Gene sequence:
>1479_bases ATGACCGCCAAGCCACGCTTGGATTTTTGGCAGATCTGGAACATGTGCTTCGGCTTTCTCGGCATCCAGTTCGGCTTCGC ACTGCAGAACGCCAATGCCAGCCGCATCTTCCAGACCCTGGGCGCGCAGGTCGACGACGTGCCCGGCCTGTGGATTGCTG CACCGCTCACCGGCCTGGTCGTGCAACCGGTCATCGGTTACCTGTCCGATCGTACCTGGACTCCGTGGGGTCGCCGGCGT CCCTATTTCATGGTGGGCGCTGTCTTTACCACGCTGGCCTTGCTGGTGATGCCCAACGCGCCGATGCTCTGGGTGGCCGC CGGCACGCTGTGGGTGCTGGATGCATCGATCAACATCTCGATGGAGCCTTTCCGTGCGCTGGTGGGCGACCAGTTGCCGC CGTCGCAACGGCCGACCGGCTATGCAATGCAGAGCTTCTTCATCGGCATCGGCGCGATCGTCGCGAGTTTTCTGCCCTGG CTGCTGACCCATTGGGGCATTGCCAACACCGCGCCGCCAGGCCAGTTGCCCGACAGCGTGCGCTACGCGTTCTACCTCGG TGCAGCGGTGCTGTTCCTGTCGATCACCTGGACGGTGCTGCGCACGCGCGAGTACAGCCCAGAGCAGCTTGCCGGTTTTG ACGATGCGCATCCGCCTCTCGCGCAGGCGGTAAGCACTGGCATGGTGCCGACATCCATGGCGAGCGTGCTGTGGTGCGGT CTGGGCGTGTTGCTCGCCGCGGCCATCGCCTGGCAGCACGGCGACCGCATGCTGTATGTGCTGGCCGGGTTGTGTTTCGC CTACGGCGTCTTGCTTGCCTTGGCCCGCATGTTGCCCGCCACCAGCATGCTGGTGGCGATCGTGCAGGACGTGCGCAGCA TGCCGATGACGATGCGTCGCCTGGCCTGGGTGCAGTTCTTCTCGTGGTTTGCCTTGTTTGCGATGTGGATCTACACCACT GCCGCGGTGACGCAGGTGCATTTCGGTGCGAGCGACACCGCTTCGGCGGCCTACAACGATGGCGCAAACTGGGTCGGCGT GTTGTTCGGCGCCTATAACGGGTTTGCTGCATTGGCTGCAGTGGTAATCCCGCTGCTGGTGCGTGCGATCGGCTTGCGCT GGAGCCATCTGTGCAATCTGTGGCTGGGTGCCGCCGGCTTGTTGTCGATGCTGGTCATCCGCGACCCGCAGTGGTTGCTG CTGTCGATGCTGGGTGTCGGCTTCGCCTGGGCCTCGATCCTGTCGCTGCCATATGCCTTGCTGTCAGACAGCGTGCCCGC TCCCAAGATGGGCGTGTACATGGGCATCTTCAATTTCTTTATCGTGATTCCGCAGTTGGTCGCGGCCAGCGCGCTGGGCT TTGTGCTGCGCGTATGGCTGGGCGGGCAGCCGATCTATGCATTGGCCATTGGCGGGCTCAGCCTGTTGATTGCAGGGGTG TGCGTGGTGCGGGTTCCAGTGGCCTCGGGAGGGCAATGA
Upstream 100 bases:
>100_bases CGCGGTACAACGGCGGTCGCGGCGGCCGCGATGGCGTGGTCAACGCTGCGCAGGTCAGTGCGTTGTTGGTCGGGCCTGCA GCACGCGTGGAGGTTGCGCC
Downstream 100 bases:
>100_bases TGCGCAGTGCGATGTATGTAGCGTTGACGATGTACGCAGGCGTGGCGATGGCGGCGCCTGCAGCCAAGGACTACTACGGC ACCCTGGAGCCGTTCGCCGC
Product: transport protein
Products: NA
Alternate protein names: Sugar Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Protein; SugarCation Symporter; Facilitator Superfamily Transporter Permease; Cytoplasmic Membrane Maltose Transporter MalY; Transport Protein Facilitator Superfamily Protein; MFS Superfamily Sugcific Permease; Facilitator Superfamily Transmembrane Protein; Facilitator Family Transporter; Sucrose Transporter Protein
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTAKPRLDFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLVVQPVIGYLSDRTWTPWGRRR PYFMVGAVFTTLALLVMPNAPMLWVAAGTLWVLDASINISMEPFRALVGDQLPPSQRPTGYAMQSFFIGIGAIVASFLPW LLTHWGIANTAPPGQLPDSVRYAFYLGAAVLFLSITWTVLRTREYSPEQLAGFDDAHPPLAQAVSTGMVPTSMASVLWCG LGVLLAAAIAWQHGDRMLYVLAGLCFAYGVLLALARMLPATSMLVAIVQDVRSMPMTMRRLAWVQFFSWFALFAMWIYTT AAVTQVHFGASDTASAAYNDGANWVGVLFGAYNGFAALAAVVIPLLVRAIGLRWSHLCNLWLGAAGLLSMLVIRDPQWLL LSMLGVGFAWASILSLPYALLSDSVPAPKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLLIAGV CVVRVPVASGGQ
Sequences:
>Translated_492_residues MTAKPRLDFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLVVQPVIGYLSDRTWTPWGRRR PYFMVGAVFTTLALLVMPNAPMLWVAAGTLWVLDASINISMEPFRALVGDQLPPSQRPTGYAMQSFFIGIGAIVASFLPW LLTHWGIANTAPPGQLPDSVRYAFYLGAAVLFLSITWTVLRTREYSPEQLAGFDDAHPPLAQAVSTGMVPTSMASVLWCG LGVLLAAAIAWQHGDRMLYVLAGLCFAYGVLLALARMLPATSMLVAIVQDVRSMPMTMRRLAWVQFFSWFALFAMWIYTT AAVTQVHFGASDTASAAYNDGANWVGVLFGAYNGFAALAAVVIPLLVRAIGLRWSHLCNLWLGAAGLLSMLVIRDPQWLL LSMLGVGFAWASILSLPYALLSDSVPAPKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLLIAGV CVVRVPVASGGQ >Mature_491_residues TAKPRLDFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLVVQPVIGYLSDRTWTPWGRRRP YFMVGAVFTTLALLVMPNAPMLWVAAGTLWVLDASINISMEPFRALVGDQLPPSQRPTGYAMQSFFIGIGAIVASFLPWL LTHWGIANTAPPGQLPDSVRYAFYLGAAVLFLSITWTVLRTREYSPEQLAGFDDAHPPLAQAVSTGMVPTSMASVLWCGL GVLLAAAIAWQHGDRMLYVLAGLCFAYGVLLALARMLPATSMLVAIVQDVRSMPMTMRRLAWVQFFSWFALFAMWIYTTA AVTQVHFGASDTASAAYNDGANWVGVLFGAYNGFAALAAVVIPLLVRAIGLRWSHLCNLWLGAAGLLSMLVIRDPQWLLL SMLGVGFAWASILSLPYALLSDSVPAPKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLLIAGVC VVRVPVASGGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53277; Mature: 53145
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKPRLDFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLV CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH VQPVIGYLSDRTWTPWGRRRPYFMVGAVFTTLALLVMPNAPMLWVAAGTLWVLDASINIS HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCC MEPFRALVGDQLPPSQRPTGYAMQSFFIGIGAIVASFLPWLLTHWGIANTAPPGQLPDSV HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH RYAFYLGAAVLFLSITWTVLRTREYSPEQLAGFDDAHPPLAQAVSTGMVPTSMASVLWCG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHH LGVLLAAAIAWQHGDRMLYVLAGLCFAYGVLLALARMLPATSMLVAIVQDVRSMPMTMRR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LAWVQFFSWFALFAMWIYTTAAVTQVHFGASDTASAAYNDGANWVGVLFGAYNGFAALAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHH VVIPLLVRAIGLRWSHLCNLWLGAAGLLSMLVIRDPQWLLLSMLGVGFAWASILSLPYAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSDSVPAPKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLLIAGV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH CVVRVPVASGGQ HHHEEECCCCCC >Mature Secondary Structure TAKPRLDFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH VQPVIGYLSDRTWTPWGRRRPYFMVGAVFTTLALLVMPNAPMLWVAAGTLWVLDASINIS HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCC MEPFRALVGDQLPPSQRPTGYAMQSFFIGIGAIVASFLPWLLTHWGIANTAPPGQLPDSV HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH RYAFYLGAAVLFLSITWTVLRTREYSPEQLAGFDDAHPPLAQAVSTGMVPTSMASVLWCG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHH LGVLLAAAIAWQHGDRMLYVLAGLCFAYGVLLALARMLPATSMLVAIVQDVRSMPMTMRR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LAWVQFFSWFALFAMWIYTTAAVTQVHFGASDTASAAYNDGANWVGVLFGAYNGFAALAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHH VVIPLLVRAIGLRWSHLCNLWLGAAGLLSMLVIRDPQWLLLSMLGVGFAWASILSLPYAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSDSVPAPKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLLIAGV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH CVVRVPVASGGQ HHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA