| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748660
Identifier: 77748660
GI number: 77748660
Start: 2947063
End: 2947770
Strand: Reverse
Name: 77748660
Synonym: XAC2517
Alternate gene names: NA
Gene position: 2947770-2947063 (Counterclockwise)
Preceding gene: 21243251
Following gene: 21243248
Centisome position: 56.96
GC content: 62.99
Gene sequence:
>708_bases ATGATTCCCCAACTGATTCACCTGACCGCGCCCACCAAGCAGCTGCTATGGGAAGAGCGCAGGATTTGCGATCGCCTGCA GCGCCTGTTGCCTGGATGGACCTGTTACGTCTGGGACGATGCCGATAACTCCCAGCTGATGCGACGTGCGTTCCCCGAGT TTGCCGAGCGCTACGAGCAGATTCGCTTCGGTGTGATGAAAGCCGATATCGCCCGCTGCGCGTACATGCACGCACATGGC GGCTTCTACTTCGACACCGACTACAAACTGCTACGACCGCTCGATGCGCAGGTGCTGTCGCAGCATTGCGTGCTGCCCGT CGAGGAAGGTGCGCCGGGCCAGGAAGACTTCAAGATCGGCAATGCCGTGTTCGGCTCCGAGCCCGGGCATCCGTTCTGGC GCGCGTTCATCGAGCACATCTTTACCGCGCATGCCCCGGAAACGCTGCAGGACCACCGCGAGATTCCGATGATTTCGGGC CCGCGTGGACTGACGCGTTTCTACAACGCGCACGGTGGGCAGTTCGCCGACATCCTGTTCCCGCCACGCGATGCCTTCCA CCCGGATCGCACCTGGTTCGGGCTTGGCCATCGTGGCGGCAAGAGCGCGGTCGGCTCGCACCTGTGCTGGGCTTCGTGGC GCGGCAAGTCGCCGCGGCGTGCGCTGACCAACTACCTGCGCCGCAAGTTGAACGCTGTGCCGATTTGA
Upstream 100 bases:
>100_bases AGTGCGACTACGGTTGGTGCGGCCGGGCCAGCGACCAGGTAGCCGAATCGATGCGGCACTGCGGTGGCGGCTCGGTTCCC CCACAGCCAGAGTCGCGCCC
Downstream 100 bases:
>100_bases GTGGCAGCGTGCGCGTGATAGGGCAATCGGCCTGGGGCAGGGCCGCTCGGGTCGAATCTGAGTGAGGTCATTTCCCTGCA TGCCGCCGGCGATTTATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MIPQLIHLTAPTKQLLWEERRICDRLQRLLPGWTCYVWDDADNSQLMRRAFPEFAERYEQIRFGVMKADIARCAYMHAHG GFYFDTDYKLLRPLDAQVLSQHCVLPVEEGAPGQEDFKIGNAVFGSEPGHPFWRAFIEHIFTAHAPETLQDHREIPMISG PRGLTRFYNAHGGQFADILFPPRDAFHPDRTWFGLGHRGGKSAVGSHLCWASWRGKSPRRALTNYLRRKLNAVPI
Sequences:
>Translated_235_residues MIPQLIHLTAPTKQLLWEERRICDRLQRLLPGWTCYVWDDADNSQLMRRAFPEFAERYEQIRFGVMKADIARCAYMHAHG GFYFDTDYKLLRPLDAQVLSQHCVLPVEEGAPGQEDFKIGNAVFGSEPGHPFWRAFIEHIFTAHAPETLQDHREIPMISG PRGLTRFYNAHGGQFADILFPPRDAFHPDRTWFGLGHRGGKSAVGSHLCWASWRGKSPRRALTNYLRRKLNAVPI >Mature_235_residues MIPQLIHLTAPTKQLLWEERRICDRLQRLLPGWTCYVWDDADNSQLMRRAFPEFAERYEQIRFGVMKADIARCAYMHAHG GFYFDTDYKLLRPLDAQVLSQHCVLPVEEGAPGQEDFKIGNAVFGSEPGHPFWRAFIEHIFTAHAPETLQDHREIPMISG PRGLTRFYNAHGGQFADILFPPRDAFHPDRTWFGLGHRGGKSAVGSHLCWASWRGKSPRRALTNYLRRKLNAVPI
Specific function: Unknown
COG id: COG3774
COG function: function code M; Mannosyltransferase OCH1 and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27081; Mature: 27081
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPQLIHLTAPTKQLLWEERRICDRLQRLLPGWTCYVWDDADNSQLMRRAFPEFAERYEQ CCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH IRFGVMKADIARCAYMHAHGGFYFDTDYKLLRPLDAQVLSQHCVLPVEEGAPGQEDFKIG HHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCEECCCCCCCCHHHCCC NAVFGSEPGHPFWRAFIEHIFTAHAPETLQDHREIPMISGPRGLTRFYNAHGGQFADILF CEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEC PPRDAFHPDRTWFGLGHRGGKSAVGSHLCWASWRGKSPRRALTNYLRRKLNAVPI CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIPQLIHLTAPTKQLLWEERRICDRLQRLLPGWTCYVWDDADNSQLMRRAFPEFAERYEQ CCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH IRFGVMKADIARCAYMHAHGGFYFDTDYKLLRPLDAQVLSQHCVLPVEEGAPGQEDFKIG HHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCEECCCCCCCCHHHCCC NAVFGSEPGHPFWRAFIEHIFTAHAPETLQDHREIPMISGPRGLTRFYNAHGGQFADILF CEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEC PPRDAFHPDRTWFGLGHRGGKSAVGSHLCWASWRGKSPRRALTNYLRRKLNAVPI CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA