| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748635
Identifier: 77748635
GI number: 77748635
Start: 2545399
End: 2547810
Strand: Direct
Name: 77748635
Synonym: XAC2173
Alternate gene names: NA
Gene position: 2545399-2547810 (Clockwise)
Preceding gene: 21242907
Following gene: 21242911
Centisome position: 49.18
GC content: 69.11
Gene sequence:
>2412_bases ATGTCTGTGTCCCTGTCCCACGATGTGATCATCGCCGCCGCCCAACGTGCGGCACGCGCCATCCCGCCGCTGTGGCCGCT CGCCTCCAGCGTTGCGGTCAACCCCTTCCTCGGCCAGGCCAGCGAGCCCCTGGAAATGGCGGCGGCGCGACTGCGACGCG CGTCCGGTATCGCCGTCACCATGCCGCGGCATTGGTACGCAGAACGGCTCCAGTCCGGCGAAATCACCGAAGACGATCTG CGGGCGCCCTTGCAGAACGCGCCGGCCGCGCTGCGCCCGCCGAGCTTGTCCGCGCTCAGACACGCCATCGCAGCCACGCG CCCTTCCCCGCAGGCGATCCCCACGGTCGCCGAGCTGGCCCGCGACACAGCCGCGGTCGACTGGCCCGGCATCGTCAACG AACGCATCGGTCACTGGGCAGCGGGCTATTTCGACCAGGGCCAGGCGCTCTGGGCGGTCGGCCGGTCCGGTGGTGCCTAC AGCACCTGGCGGATCATCGCGACCCACGATCTGACCCCGGAAATCGCCGGCCTGGCAGGTTTCGCACGGTATGTGGCGGA TGCGCCAGCCAATGCCGAAGACGCAATCGTCGACTGCGTCGCTCGCCTGGGACTTTCGCAGGACGCGCTGGACGGTTATT TCCACCGCTTGCTGACCACGTTGGGCGGCTGGGGACAGCTCGGCCGGTATCGGCTCTGGCAGGCGGAGTTGAGCGGCGCA ACCGATGCATGCGTCACCGACCTGCTCGCCATCCGCATGCTCTGGGAGGCCGCGCTGCTGGGCAACGGCGGCTGCGCGCT GGTGCCTGGCTGGCGGACGGCCATTGCCGCCTACGCCGAGCCGGTCGCTGCAACCTCGGACGATGTCATCGACAGCATCC TGCAGGAAGCGGCCGAACGTGCAGCGCAGCGAAAGCTCAACGCCGTGCTGGCCGCGCCATCGCCGGCCCAGGTCGCAGCT GGCCGTGTGAAGCTGCAAATGGCGTTCTGCATCGATGTGCGCTCGGAAGTCTTCCGCCGGGCGCTGGAAAGCCTCGATTC GGGCATCCAGACCCTCGGGTTTGCAGGGTTTTTCGGCTTGGGCATCGGCCATCGCCGGTTCGCCTCGGACGTGGTCGAAG CGCGCCTGCCGGTGCTGCTCGCTCCAGGCGTGATCACCTGCGCAGGTGACGCGACGGCGTCGGCAGCCGCCTCCGACCTC AGCGCACGGATCGCGGCACGTGCCAAACGCGCCTGGGGCCGCTTCAAGCTGGCGGCCATTTCCTCGTTCGCCTTCGTCGA GGCCACCGGCCCGATCTACGTCGCCAAGCTGCTGCGCGACGGGCTGGCGCTCGCCCGCCAGCACGCACCGAACGAGCCTG CGCCACGCCCTGCCGACGGGCTGGACCTGGAGACCCGGCTGACCATGGCCACGCGCATCCTCAAGGCGATGTCGTTCACC GGCGGCTTCGCGCGGCTGGTGGTACTCGCCGGCCATGGTGCGAAAGTGGTCAACAACCCCCATGCGAGCGCACTGCACTG CGGCGCATGCGGCGGCTATTCCGGCGAAGTGAACGCGCGGCTGCTCGCGTCGCTGCTCAACGATAGCCAGGTGCGCGCCG GTCTTGCCGCACGCGGCATCGTCATTCCCGCCGACACGTTATTCCTGGCCGCACTGCACGACACCACGACCGATGCGGTC ACCCTCTACACCGCCGATCACCCTTCGCCCGGGCATGCCGAAGATCTCGCCCAAGCGGCGCAGTGGCTGGCCGCGGCCGG AGCGCTGGCGCGGGCGGAACGTGCCGCGCGCCTGCCCCGCGCGCACCGCAGCCAGGACATCGCACATCGCGCCCGCGACT GGGCCGAGATTCGCCCCGAATGGGCACTTGCCGGCTGCCAGGCCTTCATCGCCGCACCGCGCTCGCGCACTGCCGGGCGC GACCTGGCCGGGCGCGCCTTCCTCCACGACTACGACTGGCGCTACGACGACGGCTTCGGCGTGCTGGAGTTGATCCTGAC CGCACCGGTCGTCGTCGCCAGCTGGATCAGCCTGCAGTACTACGGATCGACCGTCGCGCCCGAGAGTTTTGGCGCCGGCA ACAAGCTGCTGCACAACGTCACCGGCGGCATCGGCGTAGTCGAGGGCAACGGCGGGATCCTGCGCACCGGATTGCCGTGG CAATCGGTGCATGACGGCCAACGCCTGACCCACGAGCCGCTGCGCCTCTCCGTGCTGATCGAAGCGCCGCCCGAAGCGAT CGCCAACATCCTCGAACGTCACCCGCAGGTCCGCGCGCTGTTCGACAACCGTTGGCTGCATCTGTTCGCCCTGGACGACG AGGGCCTGATACGCCCAGGGTTCCGTAGACACTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAG GTCGCCAGTTGA
Upstream 100 bases:
>100_bases CGCCACGATCGATCGCCTGCTTGGCGGCTGGTCCGTTCGCAAGACCTCCTGAACCCCTTCACGCCAGGCCCCCATGCTGA TGACCACGACGACCACCGCC
Downstream 100 bases:
>100_bases ACCATGACGGCGTTGTGGGTTGTAGAACATCTCGATGTAGTCGAACACCTCGGCGCGTGCGGCGTCCTTGGTGGGGTAGA TCCGCCGCCTGATCCGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 803; Mature: 802
Protein sequence:
>803_residues MSVSLSHDVIIAAAQRAARAIPPLWPLASSVAVNPFLGQASEPLEMAAARLRRASGIAVTMPRHWYAERLQSGEITEDDL RAPLQNAPAALRPPSLSALRHAIAATRPSPQAIPTVAELARDTAAVDWPGIVNERIGHWAAGYFDQGQALWAVGRSGGAY STWRIIATHDLTPEIAGLAGFARYVADAPANAEDAIVDCVARLGLSQDALDGYFHRLLTTLGGWGQLGRYRLWQAELSGA TDACVTDLLAIRMLWEAALLGNGGCALVPGWRTAIAAYAEPVAATSDDVIDSILQEAAERAAQRKLNAVLAAPSPAQVAA GRVKLQMAFCIDVRSEVFRRALESLDSGIQTLGFAGFFGLGIGHRRFASDVVEARLPVLLAPGVITCAGDATASAAASDL SARIAARAKRAWGRFKLAAISSFAFVEATGPIYVAKLLRDGLALARQHAPNEPAPRPADGLDLETRLTMATRILKAMSFT GGFARLVVLAGHGAKVVNNPHASALHCGACGGYSGEVNARLLASLLNDSQVRAGLAARGIVIPADTLFLAALHDTTTDAV TLYTADHPSPGHAEDLAQAAQWLAAAGALARAERAARLPRAHRSQDIAHRARDWAEIRPEWALAGCQAFIAAPRSRTAGR DLAGRAFLHDYDWRYDDGFGVLELILTAPVVVASWISLQYYGSTVAPESFGAGNKLLHNVTGGIGVVEGNGGILRTGLPW QSVHDGQRLTHEPLRLSVLIEAPPEAIANILERHPQVRALFDNRWLHLFALDDEGLIRPGFRRHSRPSLRVAPFKLYRGQ VAS
Sequences:
>Translated_803_residues MSVSLSHDVIIAAAQRAARAIPPLWPLASSVAVNPFLGQASEPLEMAAARLRRASGIAVTMPRHWYAERLQSGEITEDDL RAPLQNAPAALRPPSLSALRHAIAATRPSPQAIPTVAELARDTAAVDWPGIVNERIGHWAAGYFDQGQALWAVGRSGGAY STWRIIATHDLTPEIAGLAGFARYVADAPANAEDAIVDCVARLGLSQDALDGYFHRLLTTLGGWGQLGRYRLWQAELSGA TDACVTDLLAIRMLWEAALLGNGGCALVPGWRTAIAAYAEPVAATSDDVIDSILQEAAERAAQRKLNAVLAAPSPAQVAA GRVKLQMAFCIDVRSEVFRRALESLDSGIQTLGFAGFFGLGIGHRRFASDVVEARLPVLLAPGVITCAGDATASAAASDL SARIAARAKRAWGRFKLAAISSFAFVEATGPIYVAKLLRDGLALARQHAPNEPAPRPADGLDLETRLTMATRILKAMSFT GGFARLVVLAGHGAKVVNNPHASALHCGACGGYSGEVNARLLASLLNDSQVRAGLAARGIVIPADTLFLAALHDTTTDAV TLYTADHPSPGHAEDLAQAAQWLAAAGALARAERAARLPRAHRSQDIAHRARDWAEIRPEWALAGCQAFIAAPRSRTAGR DLAGRAFLHDYDWRYDDGFGVLELILTAPVVVASWISLQYYGSTVAPESFGAGNKLLHNVTGGIGVVEGNGGILRTGLPW QSVHDGQRLTHEPLRLSVLIEAPPEAIANILERHPQVRALFDNRWLHLFALDDEGLIRPGFRRHSRPSLRVAPFKLYRGQ VAS >Mature_802_residues SVSLSHDVIIAAAQRAARAIPPLWPLASSVAVNPFLGQASEPLEMAAARLRRASGIAVTMPRHWYAERLQSGEITEDDLR APLQNAPAALRPPSLSALRHAIAATRPSPQAIPTVAELARDTAAVDWPGIVNERIGHWAAGYFDQGQALWAVGRSGGAYS TWRIIATHDLTPEIAGLAGFARYVADAPANAEDAIVDCVARLGLSQDALDGYFHRLLTTLGGWGQLGRYRLWQAELSGAT DACVTDLLAIRMLWEAALLGNGGCALVPGWRTAIAAYAEPVAATSDDVIDSILQEAAERAAQRKLNAVLAAPSPAQVAAG RVKLQMAFCIDVRSEVFRRALESLDSGIQTLGFAGFFGLGIGHRRFASDVVEARLPVLLAPGVITCAGDATASAAASDLS ARIAARAKRAWGRFKLAAISSFAFVEATGPIYVAKLLRDGLALARQHAPNEPAPRPADGLDLETRLTMATRILKAMSFTG GFARLVVLAGHGAKVVNNPHASALHCGACGGYSGEVNARLLASLLNDSQVRAGLAARGIVIPADTLFLAALHDTTTDAVT LYTADHPSPGHAEDLAQAAQWLAAAGALARAERAARLPRAHRSQDIAHRARDWAEIRPEWALAGCQAFIAAPRSRTAGRD LAGRAFLHDYDWRYDDGFGVLELILTAPVVVASWISLQYYGSTVAPESFGAGNKLLHNVTGGIGVVEGNGGILRTGLPWQ SVHDGQRLTHEPLRLSVLIEAPPEAIANILERHPQVRALFDNRWLHLFALDDEGLIRPGFRRHSRPSLRVAPFKLYRGQV AS
Specific function: Unknown
COG id: COG3002
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0753 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2173_XANAC (Q8PKJ8)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642490.2 - GeneID: 1156244 - GenomeReviews: AE008923_GR - KEGG: xac:XAC2173 - NMPDR: fig|190486.1.peg.2134 - HOGENOM: HBG520117 - OMA: LWQAELS - ProtClustDB: CLSK924243 - BioCyc: XAXO190486:XAC2173-MONOMER - HAMAP: MF_01871 - InterPro: IPR018752
Pfam domain/function: PF10070 DUF2309
EC number: NA
Molecular weight: Translated: 85599; Mature: 85468
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSLSHDVIIAAAQRAARAIPPLWPLASSVAVNPFLGQASEPLEMAAARLRRASGIAVT CCCCCCCCHHHHHHHHHHHCCCCCHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEE MPRHWYAERLQSGEITEDDLRAPLQNAPAALRPPSLSALRHAIAATRPSPQAIPTVAELA CCHHHHHHHHCCCCCCHHHHHCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH RDTAAVDWPGIVNERIGHWAAGYFDQGQALWAVGRSGGAYSTWRIIATHDLTPEIAGLAG HHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHH FARYVADAPANAEDAIVDCVARLGLSQDALDGYFHRLLTTLGGWGQLGRYRLWQAELSGA HHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCC TDACVTDLLAIRMLWEAALLGNGGCALVPGWRTAIAAYAEPVAATSDDVIDSILQEAAER HHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AAQRKLNAVLAAPSPAQVAAGRVKLQMAFCIDVRSEVFRRALESLDSGIQTLGFAGFFGL HHHHHHHHEEECCCCHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIGHRRFASDVVEARLPVLLAPGVITCAGDATASAAASDLSARIAARAKRAWGRFKLAAI CCCHHHHHHHHHHHCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHH SSFAFVEATGPIYVAKLLRDGLALARQHAPNEPAPRPADGLDLETRLTMATRILKAMSFT HHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC GGFARLVVLAGHGAKVVNNPHASALHCGACGGYSGEVNARLLASLLNDSQVRAGLAARGI CCCEEEEEEECCCCCEECCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCE VIPADTLFLAALHDTTTDAVTLYTADHPSPGHAEDLAQAAQWLAAAGALARAERAARLPR EECCHHHHEEHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH AHRSQDIAHRARDWAEIRPEWALAGCQAFIAAPRSRTAGRDLAGRAFLHDYDWRYDDGFG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHH VLELILTAPVVVASWISLQYYGSTVAPESFGAGNKLLHNVTGGIGVVEGNGGILRTGLPW HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCEEECCCCC QSVHDGQRLTHEPLRLSVLIEAPPEAIANILERHPQVRALFDNRWLHLFALDDEGLIRPG HHCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCC FRRHSRPSLRVAPFKLYRGQVAS CCCCCCCCEEECHHHHCCCCCCC >Mature Secondary Structure SVSLSHDVIIAAAQRAARAIPPLWPLASSVAVNPFLGQASEPLEMAAARLRRASGIAVT CCCCCCCHHHHHHHHHHHCCCCCHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEE MPRHWYAERLQSGEITEDDLRAPLQNAPAALRPPSLSALRHAIAATRPSPQAIPTVAELA CCHHHHHHHHCCCCCCHHHHHCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH RDTAAVDWPGIVNERIGHWAAGYFDQGQALWAVGRSGGAYSTWRIIATHDLTPEIAGLAG HHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHH FARYVADAPANAEDAIVDCVARLGLSQDALDGYFHRLLTTLGGWGQLGRYRLWQAELSGA HHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCC TDACVTDLLAIRMLWEAALLGNGGCALVPGWRTAIAAYAEPVAATSDDVIDSILQEAAER HHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AAQRKLNAVLAAPSPAQVAAGRVKLQMAFCIDVRSEVFRRALESLDSGIQTLGFAGFFGL HHHHHHHHEEECCCCHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIGHRRFASDVVEARLPVLLAPGVITCAGDATASAAASDLSARIAARAKRAWGRFKLAAI CCCHHHHHHHHHHHCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHH SSFAFVEATGPIYVAKLLRDGLALARQHAPNEPAPRPADGLDLETRLTMATRILKAMSFT HHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC GGFARLVVLAGHGAKVVNNPHASALHCGACGGYSGEVNARLLASLLNDSQVRAGLAARGI CCCEEEEEEECCCCCEECCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCE VIPADTLFLAALHDTTTDAVTLYTADHPSPGHAEDLAQAAQWLAAAGALARAERAARLPR EECCHHHHEEHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH AHRSQDIAHRARDWAEIRPEWALAGCQAFIAAPRSRTAGRDLAGRAFLHDYDWRYDDGFG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHH VLELILTAPVVVASWISLQYYGSTVAPESFGAGNKLLHNVTGGIGVVEGNGGILRTGLPW HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCEEECCCCC QSVHDGQRLTHEPLRLSVLIEAPPEAIANILERHPQVRALFDNRWLHLFALDDEGLIRPG HHCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCC FRRHSRPSLRVAPFKLYRGQVAS CCCCCCCCEEECHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217