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The map label for this gene is tsr [H]

Identifier: 77748616

GI number: 77748616

Start: 2197827

End: 2200082

Strand: Reverse

Name: tsr [H]

Synonym: XAC1891

Alternate gene names: 77748616

Gene position: 2200082-2197827 (Counterclockwise)

Preceding gene: 21242636

Following gene: 21242634

Centisome position: 42.51

GC content: 64.54

Gene sequence:

>2256_bases
ATGATTGCTCTTCTTCAACGCTACAACGTCGGCAAGCGCCTGGGCTTCGCCTTCGGCACGCTGATCCTGCTGTCCTGCGC
CCTGGTCGTGGCTGGCCTGTACACGCTGGCGCAGGCGCGCCAGACCCTTGACACGCTCACCAACCGCAACATGGTGATCG
TCCAGCGGTTGCAGGAAATGAACAACGCGGTGTCGGTGATTGCCGTGCAGCTACGCAACATCGTGTTGCCGACCAGCGAT
GCGGAGAATCGTCGCTTCGCTGCGATCATCGAAGACCAGCGCAGCATCTACAAGGATGCACGCGAGAAGCTCTACACCTT
CTCGGCAACGCCTGCCGCCCAGGCGCTGCGTGAGAGGATCGATGCCAACAACAAGGCCGCCCGCGCGCTCAACCAGCAGG
TGATCGACCTGGGTCTTGCCGGCAAGGCGGACCAGGCCCTGCCTTTGCTGTTGCAACGTGCCGCACCCGCCACGCAGGCA
TGGCAGGACACGCTGCTGGAATATTCGGCGCTGCAGCGCCAACGCGCCCAGGAGGCCAATGCGCTGGCCACCACGGCGAT
GGCCCGCGGTCGTGCCATGTTGATTGGTGGCGGCCTGGCGGTGGTGCTGATCAGCAGCGTGCTCGCCTGGTTGATCACGC
GCAGCCTGGTGGTTCCGCTGACACGCGCCACGCGCGCCGCCGAAGCCATTGCCCAAGGCAAACTGGACAACGACGTCAGC
GCGAACTTCAACGACGAGACCGGTCGCCTGTTGCATGCCATGAACGACATGCAGGGCCAGCTGCGCAATCTGATTGCCGC
ACAGCTGGGCATGGCCAAGCGCCATGAAGAAGGCCAGATCAGCTTCCGCATGGATGCCGGCGCATTCCCGGGCGATTTCG
GCCGCATGGCCCATGACACCAACGAGCTGGTGGCCGCGCACATCAAGGTCAAGATGCAGACCATCCACCTGATCGAGCGT
TATGCCATCGGCGACCTGTCCGAAGACATGCAGCAGTTGCCCGGCGAGAAGGCGGCCATCACCGCGGCAATGAACCAGGT
CAAGCACAACCTGTCGACCATGAACACCGAGATCAAGCAGCTGGCGCAGGCTGCGGCCAATGGCGACTTCACCGCGCGCG
GCGATGCCGAGCAGTTCCAGTTCGATTTCCGCATCATGGTGGAAAGCCTCAACACCTTGATGGCCACCGCCGACGGCAAC
CTGCAATCGCTCTCGGCCTTGTTGCAGTCGATCGCTGCCGGCGACCTCACCGCGCGCATGAGCGGCCAATACCGGGGCGT
GTTCGCGCAGATGCGCGACGATGCCAATGCCACCGCCGAACAACTGGCCAGCATCGTCGGCCGCATCCAGATCGCGGCCG
ATGCGATCGGTCTGGCCTCGGGCGAAATCGCCTCCGGTAATCAGGATCTGTCGCAGCGCACCGAACAGCAGGCCGCCAAC
CTGGAAGAAACCGCGGCCTCGATGGAAGAGCTCACCTCCACCGTCAAGCAGAACGCCGAACACGCCAGCCAGGCCAACCA
GCTCGCCATTGGCGCCGCTGCGGTCGCCTCGCAAGGCGGCGACGTGGTGGCGAAGGTGGTCACCACCATGTCCGACATCC
AGGGCTCGTCCAAGAAGATCGCCGAGATCATCAGCGTCATCGACGGCATCGCGTTCCAGACCAATATCCTGGCCTTGAAC
GCGGCAGTGGAAGCGGCGCGTGCCGGCGAACAGGGCCGTGGTTTTGCGGTGGTCGCGTCTGAAGTCCGCACGCTGGCGCA
GCGTTCGGCCGGTGCCGCCAAGGAGATCAAGCACCTGATCGACGACTCGGTCGAAAAGGTCACGCAAGGCGCAACCCTGG
TCGATCAGGCCGGCACCACCATGGCCGAGATCGTCGCCAGCGTGCAGCGCGTCACCAACATCATGGGCGAGATTTCCTCG
GCCTCGCAGGAGCAGTACGCGGGTATCGAACAGGTCAACCAGACCGTCACCCACATGGACGAAGCCACCCAGCAGAACGC
CGCGCTGGTGGAAGAAGCCACTGCCGCCGCCCGCTCGATGGAAGAGCAGGCAGGTCATCTGGCCGAAGCGGTGTCGGTGT
TCAAGCTGGACGACTCGGCTGCGCAGGCGCCGCAGAGCGCACGCGTACGCCCGATCACCTCGCGCCCGGTTGCAGTGAAA
AGCGCCGCCAGGCCGGTAGCGCGCGCAGCAGCGAGCGCCTCACGGCCAGCCACATCCCAGGCCGCGCTGGCCGACGGTAA
CTGGCAAGAGTTCTGA

Upstream 100 bases:

>100_bases
GGTTCGACGCACGCCCGCTTCGGCGCCACCAGCGTACCCAGTACGCCTCCCCGCCCAGCGCATTGCCTCTTTCCTGCCCA
TCGCTCTCGAGATCCCAACC

Downstream 100 bases:

>100_bases
TTCACCGCTGTCACCCACAACGCCCCGGCATTGCCGGGGCGTTGTGCATTTAGGCCAGGCACCGACGCTGGTCCTCGCGC
GTACGATGCGGCAGCACGCC

Product: chemotaxis protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 751; Mature: 751

Protein sequence:

>751_residues
MIALLQRYNVGKRLGFAFGTLILLSCALVVAGLYTLAQARQTLDTLTNRNMVIVQRLQEMNNAVSVIAVQLRNIVLPTSD
AENRRFAAIIEDQRSIYKDAREKLYTFSATPAAQALRERIDANNKAARALNQQVIDLGLAGKADQALPLLLQRAAPATQA
WQDTLLEYSALQRQRAQEANALATTAMARGRAMLIGGGLAVVLISSVLAWLITRSLVVPLTRATRAAEAIAQGKLDNDVS
ANFNDETGRLLHAMNDMQGQLRNLIAAQLGMAKRHEEGQISFRMDAGAFPGDFGRMAHDTNELVAAHIKVKMQTIHLIER
YAIGDLSEDMQQLPGEKAAITAAMNQVKHNLSTMNTEIKQLAQAAANGDFTARGDAEQFQFDFRIMVESLNTLMATADGN
LQSLSALLQSIAAGDLTARMSGQYRGVFAQMRDDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSKKIAEIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVEKVTQGATLVDQAGTTMAEIVASVQRVTNIMGEISS
ASQEQYAGIEQVNQTVTHMDEATQQNAALVEEATAAARSMEEQAGHLAEAVSVFKLDDSAAQAPQSARVRPITSRPVAVK
SAARPVARAAASASRPATSQAALADGNWQEF

Sequences:

>Translated_751_residues
MIALLQRYNVGKRLGFAFGTLILLSCALVVAGLYTLAQARQTLDTLTNRNMVIVQRLQEMNNAVSVIAVQLRNIVLPTSD
AENRRFAAIIEDQRSIYKDAREKLYTFSATPAAQALRERIDANNKAARALNQQVIDLGLAGKADQALPLLLQRAAPATQA
WQDTLLEYSALQRQRAQEANALATTAMARGRAMLIGGGLAVVLISSVLAWLITRSLVVPLTRATRAAEAIAQGKLDNDVS
ANFNDETGRLLHAMNDMQGQLRNLIAAQLGMAKRHEEGQISFRMDAGAFPGDFGRMAHDTNELVAAHIKVKMQTIHLIER
YAIGDLSEDMQQLPGEKAAITAAMNQVKHNLSTMNTEIKQLAQAAANGDFTARGDAEQFQFDFRIMVESLNTLMATADGN
LQSLSALLQSIAAGDLTARMSGQYRGVFAQMRDDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSKKIAEIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVEKVTQGATLVDQAGTTMAEIVASVQRVTNIMGEISS
ASQEQYAGIEQVNQTVTHMDEATQQNAALVEEATAAARSMEEQAGHLAEAVSVFKLDDSAAQAPQSARVRPITSRPVAVK
SAARPVARAAASASRPATSQAALADGNWQEF
>Mature_751_residues
MIALLQRYNVGKRLGFAFGTLILLSCALVVAGLYTLAQARQTLDTLTNRNMVIVQRLQEMNNAVSVIAVQLRNIVLPTSD
AENRRFAAIIEDQRSIYKDAREKLYTFSATPAAQALRERIDANNKAARALNQQVIDLGLAGKADQALPLLLQRAAPATQA
WQDTLLEYSALQRQRAQEANALATTAMARGRAMLIGGGLAVVLISSVLAWLITRSLVVPLTRATRAAEAIAQGKLDNDVS
ANFNDETGRLLHAMNDMQGQLRNLIAAQLGMAKRHEEGQISFRMDAGAFPGDFGRMAHDTNELVAAHIKVKMQTIHLIER
YAIGDLSEDMQQLPGEKAAITAAMNQVKHNLSTMNTEIKQLAQAAANGDFTARGDAEQFQFDFRIMVESLNTLMATADGN
LQSLSALLQSIAAGDLTARMSGQYRGVFAQMRDDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSKKIAEIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVEKVTQGATLVDQAGTTMAEIVASVQRVTNIMGEISS
ASQEQYAGIEQVNQTVTHMDEATQQNAALVEEATAAARSMEEQAGHLAEAVSVFKLDDSAAQAPQSARVRPITSRPVAVK
SAARPVARAAASASRPATSQAALADGNWQEF

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=353, Percent_Identity=53.5410764872521, Blast_Score=294, Evalue=1e-80,
Organism=Escherichia coli, GI2367378, Length=316, Percent_Identity=59.8101265822785, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1788194, Length=315, Percent_Identity=54.2857142857143, Blast_Score=281, Evalue=8e-77,
Organism=Escherichia coli, GI1787690, Length=313, Percent_Identity=53.6741214057508, Blast_Score=281, Evalue=9e-77,
Organism=Escherichia coli, GI1789453, Length=235, Percent_Identity=47.2340425531915, Blast_Score=200, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 79932; Mature: 79932

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALLQRYNVGKRLGFAFGTLILLSCALVVAGLYTLAQARQTLDTLTNRNMVIVQRLQEM
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NNAVSVIAVQLRNIVLPTSDAENRRFAAIIEDQRSIYKDAREKLYTFSATPAAQALRERI
HHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH
DANNKAARALNQQVIDLGLAGKADQALPLLLQRAAPATQAWQDTLLEYSALQRQRAQEAN
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALATTAMARGRAMLIGGGLAVVLISSVLAWLITRSLVVPLTRATRAAEAIAQGKLDNDVS
HHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ANFNDETGRLLHAMNDMQGQLRNLIAAQLGMAKRHEEGQISFRMDAGAFPGDFGRMAHDT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCH
NELVAAHIKVKMQTIHLIERYAIGDLSEDMQQLPGEKAAITAAMNQVKHNLSTMNTEIKQ
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAQAAANGDFTARGDAEQFQFDFRIMVESLNTLMATADGNLQSLSALLQSIAAGDLTARM
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHH
SGQYRGVFAQMRDDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHH
AEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLI
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
DDSVEKVTQGATLVDQAGTTMAEIVASVQRVTNIMGEISSASQEQYAGIEQVNQTVTHMD
HHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHH
EATQQNAALVEEATAAARSMEEQAGHLAEAVSVFKLDDSAAQAPQSARVRPITSRPVAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCCCCCCCCCCCCCCHHH
SAARPVARAAASASRPATSQAALADGNWQEF
HHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
>Mature Secondary Structure
MIALLQRYNVGKRLGFAFGTLILLSCALVVAGLYTLAQARQTLDTLTNRNMVIVQRLQEM
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NNAVSVIAVQLRNIVLPTSDAENRRFAAIIEDQRSIYKDAREKLYTFSATPAAQALRERI
HHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH
DANNKAARALNQQVIDLGLAGKADQALPLLLQRAAPATQAWQDTLLEYSALQRQRAQEAN
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALATTAMARGRAMLIGGGLAVVLISSVLAWLITRSLVVPLTRATRAAEAIAQGKLDNDVS
HHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ANFNDETGRLLHAMNDMQGQLRNLIAAQLGMAKRHEEGQISFRMDAGAFPGDFGRMAHDT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCH
NELVAAHIKVKMQTIHLIERYAIGDLSEDMQQLPGEKAAITAAMNQVKHNLSTMNTEIKQ
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAQAAANGDFTARGDAEQFQFDFRIMVESLNTLMATADGNLQSLSALLQSIAAGDLTARM
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHH
SGQYRGVFAQMRDDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHH
AEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLI
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
DDSVEKVTQGATLVDQAGTTMAEIVASVQRVTNIMGEISSASQEQYAGIEQVNQTVTHMD
HHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHH
EATQQNAALVEEATAAARSMEEQAGHLAEAVSVFKLDDSAAQAPQSARVRPITSRPVAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCCCCCCCCCCCCCCHHH
SAARPVARAAASASRPATSQAALADGNWQEF
HHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]