| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748546
Identifier: 77748546
GI number: 77748546
Start: 814110
End: 815294
Strand: Direct
Name: 77748546
Synonym: XAC0687
Alternate gene names: NA
Gene position: 814110-815294 (Clockwise)
Preceding gene: 21241457
Following gene: 21241460
Centisome position: 15.73
GC content: 66.24
Gene sequence:
>1185_bases ATGCACGCCGACCTTCCCACACCCGATCCGGACGCGCTGGCCCACAGCGACCGGCTGGCTGCGCATGTGCGCGCCGAGAT CCAGGCCGCCGGCGGTGCGATTCCGTTCTCGCGCTTCATGGAGCTGGCGCTGTATGCGCCGGGCCTGGGCTATTACAGCG CCGGCGCCAGCAAGTTCGGCGAGGCCGGCGATTTCGTCACCGCCCCGGAATTGGGGCCGTTGTTTGCGGCCACCGTTTCC GGCGCGTTGGCGCCGGTATTGCAGCAGCTCGGGCCGCAGGCGCGGGTGCTGGAAGTGGGCGGCGGCAGCGGTGCGTTTGC CGAAGTCACGCTCAAGCGGCTGCTGGAACTGGACGCGCTGCCCGAGCGCTACGCGATCCTGGAGCCCAGCGCCGACCTGC GCGAACGTCAGCGCGAGCGGCTGGGGCGCAGTCTGATCCCGCCGGTATTCGATCTGGTGGAATGGCTGGATGCGCCGTTT CCGGACGATTGGGATGGCGTGCTGTTCGCCAACGAAGTCATCGACGCATTGCCCACGCCGCGCTTCGCACTGCGCGATGG GCAGGTGTATGAAGAAACCGTGGTGCTGGATGACCAGCAGCACTTCGCGCGCGGCGAGCAACCGGCCGATGCGTTGCTGA GTGCGGCCGTGCGTCACCTGGAGCGCTATCTGGAGCAGCCGTTCGCCGATGGCTATCGCTCCGAGTTGCTGCCGCAGTTG CCGTACTGGATCCAGGCGGTAGCCGGCGGCTTGAAGCGTGGCGCGATGTTGTTCGTCGACTACGGTTACCCGCGCGGCGA GTTCTATCGTGCGCAGCGCCAGGACGGCACCTTGCGTGCGTTTTACCGGCACCGCATGCATGAAGATCTCTACCGTTGGC CGGGTTTGCAGGATCTGACCGCATCGGTGGACTTCACCGCGTTGGCCGAGGCAGGCACCGGCGCAGGTTTCGAGCTGGCC GGCTATTGCACGCAAGCGAGCTTCCTGCTCGGCAATGGGCTGGACGCATTGTTGGCGCAGGCCGATACGCGCACCGATGA AGTGGGGCGCATGCGTCTACGCGAACAGATCAAGCGGCTGACCCTGCCCAGCGAGATGGGCGAGCGCTTCCAGGTGATGG GCTTCTCGCGCGATGTCGATTTTGCCCCTGCATTCCTGTCCGGCGATCTGACATGGCGGTTGTGA
Upstream 100 bases:
>100_bases GGTGATCAACACCACCTTGGAACTGTCTGTCATGGCGTACTCGCTCGGCGTTGCGGAGGGCTCGGCTATCCTGTGCATTG TCCCCGCAACCGGTGCCCGC
Downstream 100 bases:
>100_bases GTTCGGCACTCCGGCCGTTTCACCGGCCGCGGTTGTGGGTGGGCTTGTGGATCGCTGCGATTGTTGTGGTCATTGCCGTG TGCCTGGGGCCGCCGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MHADLPTPDPDALAHSDRLAAHVRAEIQAAGGAIPFSRFMELALYAPGLGYYSAGASKFGEAGDFVTAPELGPLFAATVS GALAPVLQQLGPQARVLEVGGGSGAFAEVTLKRLLELDALPERYAILEPSADLRERQRERLGRSLIPPVFDLVEWLDAPF PDDWDGVLFANEVIDALPTPRFALRDGQVYEETVVLDDQQHFARGEQPADALLSAAVRHLERYLEQPFADGYRSELLPQL PYWIQAVAGGLKRGAMLFVDYGYPRGEFYRAQRQDGTLRAFYRHRMHEDLYRWPGLQDLTASVDFTALAEAGTGAGFELA GYCTQASFLLGNGLDALLAQADTRTDEVGRMRLREQIKRLTLPSEMGERFQVMGFSRDVDFAPAFLSGDLTWRL
Sequences:
>Translated_394_residues MHADLPTPDPDALAHSDRLAAHVRAEIQAAGGAIPFSRFMELALYAPGLGYYSAGASKFGEAGDFVTAPELGPLFAATVS GALAPVLQQLGPQARVLEVGGGSGAFAEVTLKRLLELDALPERYAILEPSADLRERQRERLGRSLIPPVFDLVEWLDAPF PDDWDGVLFANEVIDALPTPRFALRDGQVYEETVVLDDQQHFARGEQPADALLSAAVRHLERYLEQPFADGYRSELLPQL PYWIQAVAGGLKRGAMLFVDYGYPRGEFYRAQRQDGTLRAFYRHRMHEDLYRWPGLQDLTASVDFTALAEAGTGAGFELA GYCTQASFLLGNGLDALLAQADTRTDEVGRMRLREQIKRLTLPSEMGERFQVMGFSRDVDFAPAFLSGDLTWRL >Mature_394_residues MHADLPTPDPDALAHSDRLAAHVRAEIQAAGGAIPFSRFMELALYAPGLGYYSAGASKFGEAGDFVTAPELGPLFAATVS GALAPVLQQLGPQARVLEVGGGSGAFAEVTLKRLLELDALPERYAILEPSADLRERQRERLGRSLIPPVFDLVEWLDAPF PDDWDGVLFANEVIDALPTPRFALRDGQVYEETVVLDDQQHFARGEQPADALLSAAVRHLERYLEQPFADGYRSELLPQL PYWIQAVAGGLKRGAMLFVDYGYPRGEFYRAQRQDGTLRAFYRHRMHEDLYRWPGLQDLTASVDFTALAEAGTGAGFELA GYCTQASFLLGNGLDALLAQADTRTDEVGRMRLREQIKRLTLPSEMGERFQVMGFSRDVDFAPAFLSGDLTWRL
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21396487, Length=383, Percent_Identity=26.8929503916449, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24645885, Length=410, Percent_Identity=28.0487804878049, Blast_Score=89, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43479; Mature: 43479
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHADLPTPDPDALAHSDRLAAHVRAEIQAAGGAIPFSRFMELALYAPGLGYYSAGASKFG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCHHHCC EAGDFVTAPELGPLFAATVSGALAPVLQQLGPQARVLEVGGGSGAFAEVTLKRLLELDAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCC PERYAILEPSADLRERQRERLGRSLIPPVFDLVEWLDAPFPDDWDGVLFANEVIDALPTP CCHHEEECCCHHHHHHHHHHHCHHCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCC RFALRDGQVYEETVVLDDQQHFARGEQPADALLSAAVRHLERYLEQPFADGYRSELLPQL CEEECCCCEEEHEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHCC PYWIQAVAGGLKRGAMLFVDYGYPRGEFYRAQRQDGTLRAFYRHRMHEDLYRWPGLQDLT HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHH ASVDFTALAEAGTGAGFELAGYCTQASFLLGNGLDALLAQADTRTDEVGRMRLREQIKRL HCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHC TLPSEMGERFQVMGFSRDVDFAPAFLSGDLTWRL CCCHHHCCCEEEECCCCCCCCCCHHHCCCCEECC >Mature Secondary Structure MHADLPTPDPDALAHSDRLAAHVRAEIQAAGGAIPFSRFMELALYAPGLGYYSAGASKFG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCHHHCC EAGDFVTAPELGPLFAATVSGALAPVLQQLGPQARVLEVGGGSGAFAEVTLKRLLELDAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCC PERYAILEPSADLRERQRERLGRSLIPPVFDLVEWLDAPFPDDWDGVLFANEVIDALPTP CCHHEEECCCHHHHHHHHHHHCHHCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCC RFALRDGQVYEETVVLDDQQHFARGEQPADALLSAAVRHLERYLEQPFADGYRSELLPQL CEEECCCCEEEHEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHCC PYWIQAVAGGLKRGAMLFVDYGYPRGEFYRAQRQDGTLRAFYRHRMHEDLYRWPGLQDLT HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHH ASVDFTALAEAGTGAGFELAGYCTQASFLLGNGLDALLAQADTRTDEVGRMRLREQIKRL HCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHC TLPSEMGERFQVMGFSRDVDFAPAFLSGDLTWRL CCCHHHCCCEEEECCCCCCCCCCHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA