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The map label for this gene is mdpB

Identifier: 77748502

GI number: 77748502

Start: 79267

End: 79812

Strand: Reverse

Name: mdpB

Synonym: XAC0067

Alternate gene names: NA

Gene position: 79812-79267 (Counterclockwise)

Preceding gene: 21240847

Following gene: 21240840

Centisome position: 1.54

GC content: 65.57

Gene sequence:

>546_bases
ATGAATGAGACAGAAGCGTTTGTGGGCGAAATTCGCCTGTTCCCGATCGACTGGGCGCCCGCTGGCTGGCTGCCGTGCGA
TGGCCGCACCTTGCCCATCACCAGTAACGTCGCGTTGGCCTCGCTGCTCGGCACCCAGTTCGGTGGCGACGGCAAGACCA
CGTTCAACCTGCCGGATCTGCGTGGCCGCACGCCGGTCAGCCAGGGCGTCAATCCGCTCACCACGCCGCCGGTGTCCTAC
ACGGTCGGCACCTATGGCGGATTGGAGGGCGTGGCGCTGACTGCGACACAGGTTCCGCCGCATACCCACATGGTGAATGC
CGTCGCCGCGGCAGCCACGACCGCTGCGGTGGCCAGCAATGCGAACGTCCTGCATGCCGAAACCCCAACGCCGCAGTTTC
TGTACGCGCCAACCGGTGCGCTGATCCCGCTGGCCGGCGACTCGGTAAGCCAGGAAGGTGCCGGTGCCGCCCACAACAAC
ATGCAGCCATCGCTGGTGCTGAATTTCTGCATCTGCACGGTCGGCATCTATCCGCAGCGCCCCTGA

Upstream 100 bases:

>100_bases
GCGTGGCGGAAGCGTTGTGCAAGGTCCTCGCTATGACCTGGGGCGGTCCCGGGTTCCACCTACATGCGCGTGATATTGCC
GATCGTCGAGGAGCCGTTCT

Downstream 100 bases:

>100_bases
CGCGGGCCACAAAGGAACCACACCATGGATGCCTATACCGGTCAAATCATCCTCTTCGCCGGCAACTACGAACCTCAGGG
TTGGGCGTTCTGCGACGGAC

Product: microcystin dependent protein

Products: NA

Alternate protein names: Phage Tail Collar; Phage Tail Collar Domain-Containing Protein; Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Phage Tail Collar Domain Family; Microcystin Dependent Protein MdpB; Cell Wall/Surface Repeat Protein; Microcystin Dependent; Phenylacrylic Acid Decarboxylase

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNETEAFVGEIRLFPIDWAPAGWLPCDGRTLPITSNVALASLLGTQFGGDGKTTFNLPDLRGRTPVSQGVNPLTTPPVSY
TVGTYGGLEGVALTATQVPPHTHMVNAVAAAATTAAVASNANVLHAETPTPQFLYAPTGALIPLAGDSVSQEGAGAAHNN
MQPSLVLNFCICTVGIYPQRP

Sequences:

>Translated_181_residues
MNETEAFVGEIRLFPIDWAPAGWLPCDGRTLPITSNVALASLLGTQFGGDGKTTFNLPDLRGRTPVSQGVNPLTTPPVSY
TVGTYGGLEGVALTATQVPPHTHMVNAVAAAATTAAVASNANVLHAETPTPQFLYAPTGALIPLAGDSVSQEGAGAAHNN
MQPSLVLNFCICTVGIYPQRP
>Mature_181_residues
MNETEAFVGEIRLFPIDWAPAGWLPCDGRTLPITSNVALASLLGTQFGGDGKTTFNLPDLRGRTPVSQGVNPLTTPPVSY
TVGTYGGLEGVALTATQVPPHTHMVNAVAAAATTAAVASNANVLHAETPTPQFLYAPTGALIPLAGDSVSQEGAGAAHNN
MQPSLVLNFCICTVGIYPQRP

Specific function: Unknown

COG id: COG4675

COG function: function code S; Microcystin-dependent protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18693; Mature: 18693

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETEAFVGEIRLFPIDWAPAGWLPCDGRTLPITSNVALASLLGTQFGGDGKTTFNLPDL
CCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCEEECCCCC
RGRTPVSQGVNPLTTPPVSYTVGTYGGLEGVALTATQVPPHTHMVNAVAAAATTAAVASN
CCCCCHHHCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
ANVLHAETPTPQFLYAPTGALIPLAGDSVSQEGAGAAHNNMQPSLVLNFCICTVGIYPQR
CCEEEECCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
P
C
>Mature Secondary Structure
MNETEAFVGEIRLFPIDWAPAGWLPCDGRTLPITSNVALASLLGTQFGGDGKTTFNLPDL
CCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCEEECCCCC
RGRTPVSQGVNPLTTPPVSYTVGTYGGLEGVALTATQVPPHTHMVNAVAAAATTAAVASN
CCCCCHHHCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
ANVLHAETPTPQFLYAPTGALIPLAGDSVSQEGAGAAHNNMQPSLVLNFCICTVGIYPQR
CCEEEECCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA