| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465784
Identifier: 77465784
GI number: 77465784
Start: 905608
End: 907098
Strand: Reverse
Name: 77465784
Synonym: RSP_3783
Alternate gene names: NA
Gene position: 907098-905608 (Counterclockwise)
Preceding gene: 77465785
Following gene: 77465783
Centisome position: 96.19
GC content: 71.7
Gene sequence:
>1491_bases ATGGCGGGCCCCTTCCTGCGCCGGCTCGGCGCCTGGGTCGGCGGGTTCGACGCGGGTCTCGCCAACCGGCGCCTGCGCGG CTTCCGTCCCGCGCGGGCGCATGTGAACGCGCTTCTCGCCGCGGCCGGGCCCGACATGAACGCCCGCGCGCGCTACCTCG TGCGCAACAACGGCTATGCCCAGGGCGCGCTCGACAGCTGGGCCGCGAACACGGTCGGCACCGGGGTGAAACCCTCCTCG CTCATCGCGGCGCCGGCGCGGAAGGCCGCCCTCCAGCGGCTCTGGCAGGACTGGACCGACGAGGCCGACGCCGAGGGCGT GACCGATTTCTACGGCCTGCAGCGCCGCATCGCGCGCGAGTTCTTCCTCACCGGCGAATGCTTCGTGCGCCTGCGCGCGC GGCGGCCCGGCGACGGGCTCACGGTGCCGCTCCAGCTTCAGTGCCTGCCCTCCGAGATGCTGCCGATCGGCAGGACCGAG GTGCTGGGCGGCGGGCGCGCGATCCGGCAGGGGATCGAGTTCGATGCGGTGGGCCGGCGGGTGGCCTATCACTTCCATCG CCGCCATCCGGGCGATCCGACCGAGCCGGGGCTTGCGGGCGAGACGGTGCGCGTGCCGGCCGAGGATGTGCTCCACATCG TCGATCCGGTCGAGAGCGGGCAGCTCCGCGGCGTCTCGCGCTTCGCACCCGCCATCGTGAAGCTCTTCCTGCTCGATCAG TACGACGATGCCGAACTCGACCGGAAGAAGGTCGCGGCCATGTATGCGATGTTCATCACCTCGAACGATCCGGATGCGGC GCCGCTCGAGGGCGAGCTGGGCGATCAGGTGGCGCCGGGGCAGATCGTGCGTCTCGACCCGGGCGAGGACATGAAGGTGG CCGATCCCGCGGATTCGGGCGCGACCTACGAGCCCTTCCAGTACCGCACGCTCCTGCAGGTCTCGGCCGCCCTCGGCATC CCCTATGCTCACCTGTCGCAGGACATGGTGAAGGCGAACTACTCGAATGCCCGCACCGCGCTCATGGAGTTCCGCCGCCG GGTGGAGGCCTTCCAGCATTCGGTCCTCGTCTATCAGCTCTGCCGCCCGGTCTGGGCGCGCTTCACCGATCTCGCGGTGC TGACCGGAGCGGTGGGGCTGCCGGGCTATGAGCGGCGGCGGCGGGACTATCTCGCCTGCGAGTGGCTGCCGCCGAAGTGG CAATGGGTCGATCCGCTGAAGGACATCCGCGCCGAGATCGAGGAGATCGGCGCGGGCCTCAAGAGCCGGTCGCAGGCGAT CGGGGAGCGCGGCTACGACGCCGAGGAGGTCGATCGCCAGATCGCCGCCGACCGGAAGCGCGAGGGGCGGCTCGGGCTCG ACTTCCGCCGCAGCGCGCAGGGGCCTTCCGCGCCTGCGACGCAAGACGGGGCGCGCGCCGACGAGGAGGACGATGAGGAC GACGACGGACGCGCGGCGGACCGCGACGCCGGCAGGAGGGCAGAGCCATGA
Upstream 100 bases:
>100_bases CCGATCTCGCGCGGGCCATCGCCGATCTCGAACGGCGCATCGCGAAGGCGCGGAAGACGGCGCGCCGGGTGATCCGGCCC TATGCGGTGAAGGACCTGTG
Downstream 100 bases:
>100_bases ACTATCCGATGATCGCGGGCCGGGTGTTCGGCACGCCGCTGCTGGTCGATCCCGTGAAAGGCGCGGCCTTCCTCGCGGGC CTCGGCCCCCGGCTCGTGAA
Product: bacteriophage-related protein lambda family phage portal protein
Products: NA
Alternate protein names: Lambda Family Phage Portal Protein; Phage Portal Protein; Phage Portal Protein Lambda; Bacteriophage Capsid Protein; Portal Protein; Portal Protein Lambda Family; Phage Portal Protein Lambda Family Protein; Phage-Related Portal Protein; Portal Protein B; Phage Portal Protein Of Lambda Family; Portal Protein Putative Prophage; Bacteriophage-Related Protein; Bacteriophage Capsid Protein; Capsid Protein Of Prophage; Prophage; Head-Tail Preconnector Protein Phage Origin; Portal Protein GPB Of Phage Lambda; Gifsy-2 Prophage VmtV; Head Portal Protein; Phage Protein Gp; Phage Portal Protein Gp
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MAGPFLRRLGAWVGGFDAGLANRRLRGFRPARAHVNALLAAAGPDMNARARYLVRNNGYAQGALDSWAANTVGTGVKPSS LIAAPARKAALQRLWQDWTDEADAEGVTDFYGLQRRIAREFFLTGECFVRLRARRPGDGLTVPLQLQCLPSEMLPIGRTE VLGGGRAIRQGIEFDAVGRRVAYHFHRRHPGDPTEPGLAGETVRVPAEDVLHIVDPVESGQLRGVSRFAPAIVKLFLLDQ YDDAELDRKKVAAMYAMFITSNDPDAAPLEGELGDQVAPGQIVRLDPGEDMKVADPADSGATYEPFQYRTLLQVSAALGI PYAHLSQDMVKANYSNARTALMEFRRRVEAFQHSVLVYQLCRPVWARFTDLAVLTGAVGLPGYERRRRDYLACEWLPPKW QWVDPLKDIRAEIEEIGAGLKSRSQAIGERGYDAEEVDRQIAADRKREGRLGLDFRRSAQGPSAPATQDGARADEEDDED DDGRAADRDAGRRAEP
Sequences:
>Translated_496_residues MAGPFLRRLGAWVGGFDAGLANRRLRGFRPARAHVNALLAAAGPDMNARARYLVRNNGYAQGALDSWAANTVGTGVKPSS LIAAPARKAALQRLWQDWTDEADAEGVTDFYGLQRRIAREFFLTGECFVRLRARRPGDGLTVPLQLQCLPSEMLPIGRTE VLGGGRAIRQGIEFDAVGRRVAYHFHRRHPGDPTEPGLAGETVRVPAEDVLHIVDPVESGQLRGVSRFAPAIVKLFLLDQ YDDAELDRKKVAAMYAMFITSNDPDAAPLEGELGDQVAPGQIVRLDPGEDMKVADPADSGATYEPFQYRTLLQVSAALGI PYAHLSQDMVKANYSNARTALMEFRRRVEAFQHSVLVYQLCRPVWARFTDLAVLTGAVGLPGYERRRRDYLACEWLPPKW QWVDPLKDIRAEIEEIGAGLKSRSQAIGERGYDAEEVDRQIAADRKREGRLGLDFRRSAQGPSAPATQDGARADEEDDED DDGRAADRDAGRRAEP >Mature_495_residues AGPFLRRLGAWVGGFDAGLANRRLRGFRPARAHVNALLAAAGPDMNARARYLVRNNGYAQGALDSWAANTVGTGVKPSSL IAAPARKAALQRLWQDWTDEADAEGVTDFYGLQRRIAREFFLTGECFVRLRARRPGDGLTVPLQLQCLPSEMLPIGRTEV LGGGRAIRQGIEFDAVGRRVAYHFHRRHPGDPTEPGLAGETVRVPAEDVLHIVDPVESGQLRGVSRFAPAIVKLFLLDQY DDAELDRKKVAAMYAMFITSNDPDAAPLEGELGDQVAPGQIVRLDPGEDMKVADPADSGATYEPFQYRTLLQVSAALGIP YAHLSQDMVKANYSNARTALMEFRRRVEAFQHSVLVYQLCRPVWARFTDLAVLTGAVGLPGYERRRRDYLACEWLPPKWQ WVDPLKDIRAEIEEIGAGLKSRSQAIGERGYDAEEVDRQIAADRKREGRLGLDFRRSAQGPSAPATQDGARADEEDDEDD DGRAADRDAGRRAEP
Specific function: Unknown
COG id: COG5511
COG function: function code R; Bacteriophage capsid protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54769; Mature: 54638
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPFLRRLGAWVGGFDAGLANRRLRGFRPARAHVNALLAAAGPDMNARARYLVRNNGYA CCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC QGALDSWAANTVGTGVKPSSLIAAPARKAALQRLWQDWTDEADAEGVTDFYGLQRRIARE CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH FFLTGECFVRLRARRPGDGLTVPLQLQCLPSEMLPIGRTEVLGGGRAIRQGIEFDAVGRR HHCCCHHHHEEECCCCCCCCEEEEEEEECCHHCCCCCCHHCCCCCHHHHHCCCHHHHHHH VAYHFHRRHPGDPTEPGLAGETVRVPAEDVLHIVDPVESGQLRGVSRFAPAIVKLFLLDQ HHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC YDDAELDRKKVAAMYAMFITSNDPDAAPLEGELGDQVAPGQIVRLDPGEDMKVADPADSG CCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCC ATYEPFQYRTLLQVSAALGIPYAHLSQDMVKANYSNARTALMEFRRRVEAFQHSVLVYQL CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CRPVWARFTDLAVLTGAVGLPGYERRRRDYLACEWLPPKWQWVDPLKDIRAEIEEIGAGL HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCH KSRSQAIGERGYDAEEVDRQIAADRKREGRLGLDFRRSAQGPSAPATQDGARADEEDDED HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC DDGRAADRDAGRRAEP CCCCCCCCCCCCCCCC >Mature Secondary Structure AGPFLRRLGAWVGGFDAGLANRRLRGFRPARAHVNALLAAAGPDMNARARYLVRNNGYA CCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC QGALDSWAANTVGTGVKPSSLIAAPARKAALQRLWQDWTDEADAEGVTDFYGLQRRIARE CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH FFLTGECFVRLRARRPGDGLTVPLQLQCLPSEMLPIGRTEVLGGGRAIRQGIEFDAVGRR HHCCCHHHHEEECCCCCCCCEEEEEEEECCHHCCCCCCHHCCCCCHHHHHCCCHHHHHHH VAYHFHRRHPGDPTEPGLAGETVRVPAEDVLHIVDPVESGQLRGVSRFAPAIVKLFLLDQ HHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC YDDAELDRKKVAAMYAMFITSNDPDAAPLEGELGDQVAPGQIVRLDPGEDMKVADPADSG CCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCC ATYEPFQYRTLLQVSAALGIPYAHLSQDMVKANYSNARTALMEFRRRVEAFQHSVLVYQL CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CRPVWARFTDLAVLTGAVGLPGYERRRRDYLACEWLPPKWQWVDPLKDIRAEIEEIGAGL HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCH KSRSQAIGERGYDAEEVDRQIAADRKREGRLGLDFRRSAQGPSAPATQDGARADEEDDED HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC DDGRAADRDAGRRAEP CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA