| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465783
Identifier: 77465783
GI number: 77465783
Start: 904265
End: 905611
Strand: Reverse
Name: 77465783
Synonym: RSP_3784
Alternate gene names: NA
Gene position: 905611-904265 (Counterclockwise)
Preceding gene: 77465784
Following gene: 77465782
Centisome position: 96.03
GC content: 75.5
Gene sequence:
>1347_bases ATGAACTATCCGATGATCGCGGGCCGGGTGTTCGGCACGCCGCTGCTGGTCGATCCCGTGAAAGGCGCGGCCTTCCTCGC GGGCCTCGGCCCCCGGCTCGTGAACGGGGCGCTCGAGCTGCGCGGGCTCGAGGAGCTCGCGCCCGACCGCGTGGCCGAGG CCGGGCGGATCGCGCCGCGCGCCTCGGTGCTCCTCGACGATGCGGGCGACGCCCGGCGGGAGGCGGGCCGGCCGCTCTAC CTTGTGGAGGGCGGCGTCGCGGTGATCGAAGTCACCGGCACGCTCGTTCACCGTGGCGGCTGGATCGGCCAGTCCTCGGG GACGACCTCCTACGAGGGGCTGATGGCGCAGATCTCCGCGGCCGTGGCCGATCCGTCCGTGCGCGGCATCGCGCTCGAGA TCGACAGTTATGGCGGCGAGGTGGCGGGGCTCTTCGATCTGGCCGACGCGATCCGGGCCGCGCGGGCGGTGAAGCCGGTG CGCGCCTTCGTGGCCGAGGCGGCCCTGTCGGCGGCCTATGCGATTGCAAGCCAGGCCGAGCGGATCGTGCTGCCGCGCAC CGGCGCCGTGGGCAGCATTGGCGTGCTCCTCGTGCATGCCGACTTCTCGCAGGCCATGGCCGACCGCGGTGTCGCGGTCA CGCTGATCCATGCCGGGCGGCACAAGGTCGACGGCAATCCCTACGAGGCCCTGCCCGAGGGGGTGCGCGCCGACCTGCAG GCCCGCGTCGAAGCCTCCCGCGCGCTCTTCGCCGAGACGGTCGCGGCGGGCCGCGGCGCGCGGCTCAGCCGACAGCAGGC GCTCGCCACCGAGGCGCAGGTCCTCGACGGTGCCGCCGCGGTGGCCGCGGGTCTCGCCGACGAGGTCTCCGATCTCCGGA GGGCCTTCGCCGCCTTCCGCGCCGAACTGTTCGATCCGCACCTTACATCCCCCCGGGCCGGCACGCCGGCCGCAGCCAAG GAGACCCCGACCATGACCGATGAGACCACGACCGGCGCCGCGCGAGGTACGGCCGCAGAGGGCAGCGCGCCCCCAATGGA GACCGCGGAAGGATCCGGCGGCGGCGCGCCGGCCGCGAATGTCGCCGTGGCCGAGGCCGCCGAACTGATCGAGATCGGCC AGCAGGCGGCCCGGCTCGGCCTGGCCGTCGATGTGGCCGACGCGATGCGCCGCGGCCTCTCGGCCGCTGCCCTCCGCCGC ACCGTGCTCGACGGGCTGGCAGCCCGGGGCGACGGGGCCGACCTCGTGGCCCACGCCCCGACTGCTGCCGCCGGGCCGAA GGAAAGCCCGCTCCTCGCCGCCGCGCGCCGCACCGCCGAAGCGCAGGCCGCCAGCCGCCGGGCCTGA
Upstream 100 bases:
>100_bases CCGCGCCTGCGACGCAAGACGGGGCGCGCGCCGACGAGGAGGACGATGAGGACGACGACGGACGCGCGGCGGACCGCGAC GCCGGCAGGAGGGCAGAGCC
Downstream 100 bases:
>100_bases CCCGGCGGCTGTGAGACGGGGGGCTAGACCGCTCCCCGCACGCACGCTCATCCGCCCGCATCGTTCCGAAGCCCCCGCCT CCCCATGGACCGCGGGCGCT
Product: serine peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MNYPMIAGRVFGTPLLVDPVKGAAFLAGLGPRLVNGALELRGLEELAPDRVAEAGRIAPRASVLLDDAGDARREAGRPLY LVEGGVAVIEVTGTLVHRGGWIGQSSGTTSYEGLMAQISAAVADPSVRGIALEIDSYGGEVAGLFDLADAIRAARAVKPV RAFVAEAALSAAYAIASQAERIVLPRTGAVGSIGVLLVHADFSQAMADRGVAVTLIHAGRHKVDGNPYEALPEGVRADLQ ARVEASRALFAETVAAGRGARLSRQQALATEAQVLDGAAAVAAGLADEVSDLRRAFAAFRAELFDPHLTSPRAGTPAAAK ETPTMTDETTTGAARGTAAEGSAPPMETAEGSGGGAPAANVAVAEAAELIEIGQQAARLGLAVDVADAMRRGLSAAALRR TVLDGLAARGDGADLVAHAPTAAAGPKESPLLAAARRTAEAQAASRRA
Sequences:
>Translated_448_residues MNYPMIAGRVFGTPLLVDPVKGAAFLAGLGPRLVNGALELRGLEELAPDRVAEAGRIAPRASVLLDDAGDARREAGRPLY LVEGGVAVIEVTGTLVHRGGWIGQSSGTTSYEGLMAQISAAVADPSVRGIALEIDSYGGEVAGLFDLADAIRAARAVKPV RAFVAEAALSAAYAIASQAERIVLPRTGAVGSIGVLLVHADFSQAMADRGVAVTLIHAGRHKVDGNPYEALPEGVRADLQ ARVEASRALFAETVAAGRGARLSRQQALATEAQVLDGAAAVAAGLADEVSDLRRAFAAFRAELFDPHLTSPRAGTPAAAK ETPTMTDETTTGAARGTAAEGSAPPMETAEGSGGGAPAANVAVAEAAELIEIGQQAARLGLAVDVADAMRRGLSAAALRR TVLDGLAARGDGADLVAHAPTAAAGPKESPLLAAARRTAEAQAASRRA >Mature_448_residues MNYPMIAGRVFGTPLLVDPVKGAAFLAGLGPRLVNGALELRGLEELAPDRVAEAGRIAPRASVLLDDAGDARREAGRPLY LVEGGVAVIEVTGTLVHRGGWIGQSSGTTSYEGLMAQISAAVADPSVRGIALEIDSYGGEVAGLFDLADAIRAARAVKPV RAFVAEAALSAAYAIASQAERIVLPRTGAVGSIGVLLVHADFSQAMADRGVAVTLIHAGRHKVDGNPYEALPEGVRADLQ ARVEASRALFAETVAAGRGARLSRQQALATEAQVLDGAAAVAAGLADEVSDLRRAFAAFRAELFDPHLTSPRAGTPAAAK ETPTMTDETTTGAARGTAAEGSAPPMETAEGSGGGAPAANVAVAEAAELIEIGQQAARLGLAVDVADAMRRGLSAAALRR TVLDGLAARGDGADLVAHAPTAAAGPKESPLLAAARRTAEAQAASRRA
Specific function: Unknown
COG id: COG0616
COG function: function code OU; Periplasmic serine proteases (ClpP class)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S49 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004635 - InterPro: IPR002142 [H]
Pfam domain/function: PF01343 Peptidase_S49 [H]
EC number: NA
Molecular weight: Translated: 45420; Mature: 45420
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYPMIAGRVFGTPLLVDPVKGAAFLAGLGPRLVNGALELRGLEELAPDRVAEAGRIAPR CCCCEEEHHHCCCCEEECCCCCHHHHHCCCHHHHHHHHHHCCHHHHCHHHHHHHCCCCCC ASVLLDDAGDARREAGRPLYLVEGGVAVIEVTGTLVHRGGWIGQSSGTTSYEGLMAQISA HHEEEECCCHHHHHCCCEEEEEECCEEEEEEEEHHEECCCCCCCCCCCCHHHHHHHHHHH AVADPSVRGIALEIDSYGGEVAGLFDLADAIRAARAVKPVRAFVAEAALSAAYAIASQAE HHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RIVLPRTGAVGSIGVLLVHADFSQAMADRGVAVTLIHAGRHKVDGNPYEALPEGVRADLQ EEEECCCCCCCCEEEEEEECCHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH ARVEASRALFAETVAAGRGARLSRQQALATEAQVLDGAAAVAAGLADEVSDLRRAFAAFR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELFDPHLTSPRAGTPAAAKETPTMTDETTTGAARGTAAEGSAPPMETAEGSGGGAPAAN HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH VAVAEAAELIEIGQQAARLGLAVDVADAMRRGLSAAALRRTVLDGLAARGDGADLVAHAP HHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEECC TAAAGPKESPLLAAARRTAEAQAASRRA CCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNYPMIAGRVFGTPLLVDPVKGAAFLAGLGPRLVNGALELRGLEELAPDRVAEAGRIAPR CCCCEEEHHHCCCCEEECCCCCHHHHHCCCHHHHHHHHHHCCHHHHCHHHHHHHCCCCCC ASVLLDDAGDARREAGRPLYLVEGGVAVIEVTGTLVHRGGWIGQSSGTTSYEGLMAQISA HHEEEECCCHHHHHCCCEEEEEECCEEEEEEEEHHEECCCCCCCCCCCCHHHHHHHHHHH AVADPSVRGIALEIDSYGGEVAGLFDLADAIRAARAVKPVRAFVAEAALSAAYAIASQAE HHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RIVLPRTGAVGSIGVLLVHADFSQAMADRGVAVTLIHAGRHKVDGNPYEALPEGVRADLQ EEEECCCCCCCCEEEEEEECCHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH ARVEASRALFAETVAAGRGARLSRQQALATEAQVLDGAAAVAAGLADEVSDLRRAFAAFR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELFDPHLTSPRAGTPAAAKETPTMTDETTTGAARGTAAEGSAPPMETAEGSGGGAPAAN HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH VAVAEAAELIEIGQQAARLGLAVDVADAMRRGLSAAALRRTVLDGLAARGDGADLVAHAP HHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEECC TAAAGPKESPLLAAARRTAEAQAASRRA CCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]