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The map label for this gene is rbsB [H]

Identifier: 77465695

GI number: 77465695

Start: 808643

End: 809575

Strand: Direct

Name: rbsB [H]

Synonym: RSP_3687

Alternate gene names: 77465695

Gene position: 808643-809575 (Clockwise)

Preceding gene: 77465694

Following gene: 77465696

Centisome position: 85.75

GC content: 67.52

Gene sequence:

>933_bases
ATGACCCCCCACTTCACCCGCCGTGCCCTCGGCGCCCTGCTGACCTCGAGCCTGCTCGGCGCCGCGGCCCTGCCCGCCTT
CGCGCAGGAGCAGAAAACCGTGGCGCTGGTCCAGATCAACCAGCAGGCCCTGTTCTTCAACGAGATGAATCGCGGCGCGC
AGGAAGCGGCCGACAAGGCGGGCGTCAAGCTCGTCATCTTCAATGCGAACAACGACTCGGCCGCGCAGAACAGCGCGATC
GAGACCTACATCCAGGAAGGCGTGGACGGTCTCGCGGTGGTGGCCATCGACGTGAACGGCATCATGCCCGCCGTCCAGCA
GGCGGCCGATGCAGGCATCCCCGTGGTGGCCATCGACGCGATCCTGCCCGAGGGGCCGCAGAAGGCGCAGATCGGCGTGG
ACAATGCCAAGGCCGGCGCCGACCTCGCGGCGCATTACAACGAGACCATGGCCGAGCCCTCGAAGCTCGGGATCGTCGGC
GCGCTCAACTCCTACATCCAGAACGTCCGCAAGGACGGGTTCGAGCAGGCGCTGGACGACAAGGTGACGGTCGTGGGCAC
GGTCGACGGCCAGAACATCCAGGACGTGGCGCTGGGGGCGGCCGAGAACCTCATCACCGCCAACCCCGACCTGAGCGCGA
TCTATGCCACGGGCGAGCCCGCGCTGATGGGGGCCATCGCCGGCGTGGCCAGTCAGGGCAAGCAGGCCGATGTCTCGATC
TTCGGCTGGGACCTGACCGCGCAGGCCATCGACGCCATCGACGAGGGCTATCTCAAGGCCGTGATCCAGCAGGATCCGGC
AGCGATGGGCGCGGCGGCGGTCGAGGCGCTGGTGACGCTCGCGGACGGCGGCGAGGTCGACAAGACCATCTCGGTGCCCG
TGACCATCGTCACCAAGGACAATGTCGACGGCTTCCGGGCGCTCTTTAAATGA

Upstream 100 bases:

>100_bases
TCCCGCCAGAGGAGCTGCTTCCTGTCACGCTGATCGAGCGGGAGTCCGTTGCACCGCCGGTCGGACAGACCAGACGCAAC
ACAAACAGCGAGGATTGACC

Downstream 100 bases:

>100_bases
GGACGGCGCCCTCCGCACCCGAGGAAGAGAGGGGGGTACCCCCCCTCTCCGCAGCCCCGATCCTGTCGCTGCGCAACATC
CACAAGACCTTCGGCTCGCA

Product: ABC sugar transporter, periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTPHFTRRALGALLTSSLLGAAALPAFAQEQKTVALVQINQQALFFNEMNRGAQEAADKAGVKLVIFNANNDSAAQNSAI
ETYIQEGVDGLAVVAIDVNGIMPAVQQAADAGIPVVAIDAILPEGPQKAQIGVDNAKAGADLAAHYNETMAEPSKLGIVG
ALNSYIQNVRKDGFEQALDDKVTVVGTVDGQNIQDVALGAAENLITANPDLSAIYATGEPALMGAIAGVASQGKQADVSI
FGWDLTAQAIDAIDEGYLKAVIQQDPAAMGAAAVEALVTLADGGEVDKTISVPVTIVTKDNVDGFRALFK

Sequences:

>Translated_310_residues
MTPHFTRRALGALLTSSLLGAAALPAFAQEQKTVALVQINQQALFFNEMNRGAQEAADKAGVKLVIFNANNDSAAQNSAI
ETYIQEGVDGLAVVAIDVNGIMPAVQQAADAGIPVVAIDAILPEGPQKAQIGVDNAKAGADLAAHYNETMAEPSKLGIVG
ALNSYIQNVRKDGFEQALDDKVTVVGTVDGQNIQDVALGAAENLITANPDLSAIYATGEPALMGAIAGVASQGKQADVSI
FGWDLTAQAIDAIDEGYLKAVIQQDPAAMGAAAVEALVTLADGGEVDKTISVPVTIVTKDNVDGFRALFK
>Mature_309_residues
TPHFTRRALGALLTSSLLGAAALPAFAQEQKTVALVQINQQALFFNEMNRGAQEAADKAGVKLVIFNANNDSAAQNSAIE
TYIQEGVDGLAVVAIDVNGIMPAVQQAADAGIPVVAIDAILPEGPQKAQIGVDNAKAGADLAAHYNETMAEPSKLGIVGA
LNSYIQNVRKDGFEQALDDKVTVVGTVDGQNIQDVALGAAENLITANPDLSAIYATGEPALMGAIAGVASQGKQADVSIF
GWDLTAQAIDAIDEGYLKAVIQQDPAAMGAAAVEALVTLADGGEVDKTISVPVTIVTKDNVDGFRALFK

Specific function: Involved in the high-affinity D-ribose membrane transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788898, Length=321, Percent_Identity=26.1682242990654, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790192, Length=293, Percent_Identity=29.0102389078498, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI1790526, Length=299, Percent_Identity=26.4214046822742, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 31952; Mature: 31821

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPHFTRRALGALLTSSLLGAAALPAFAQEQKTVALVQINQQALFFNEMNRGAQEAADKA
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCHHHHHHHHCCCHHHHHHHC
GVKLVIFNANNDSAAQNSAIETYIQEGVDGLAVVAIDVNGIMPAVQQAADAGIPVVAIDA
CEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEE
ILPEGPQKAQIGVDNAKAGADLAAHYNETMAEPSKLGIVGALNSYIQNVRKDGFEQALDD
CCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCC
KVTVVGTVDGQNIQDVALGAAENLITANPDLSAIYATGEPALMGAIAGVASQGKQADVSI
CEEEEEECCCCCHHHHHHCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEE
FGWDLTAQAIDAIDEGYLKAVIQQDPAAMGAAAVEALVTLADGGEVDKTISVPVTIVTKD
EECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEC
NVDGFRALFK
CCHHHHHHCC
>Mature Secondary Structure 
TPHFTRRALGALLTSSLLGAAALPAFAQEQKTVALVQINQQALFFNEMNRGAQEAADKA
CCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCHHHHHHHHCCCHHHHHHHC
GVKLVIFNANNDSAAQNSAIETYIQEGVDGLAVVAIDVNGIMPAVQQAADAGIPVVAIDA
CEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEE
ILPEGPQKAQIGVDNAKAGADLAAHYNETMAEPSKLGIVGALNSYIQNVRKDGFEQALDD
CCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCC
KVTVVGTVDGQNIQDVALGAAENLITANPDLSAIYATGEPALMGAIAGVASQGKQADVSI
CEEEEEECCCCCHHHHHHCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEE
FGWDLTAQAIDAIDEGYLKAVIQQDPAAMGAAAVEALVTLADGGEVDKTISVPVTIVTKD
EECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEC
NVDGFRALFK
CCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 7921236 [H]