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The map label for this gene is ycjN [C]

Identifier: 77465681

GI number: 77465681

Start: 792995

End: 794209

Strand: Reverse

Name: ycjN [C]

Synonym: RSP_3674

Alternate gene names: 77465681

Gene position: 794209-792995 (Counterclockwise)

Preceding gene: 77465682

Following gene: 77465680

Centisome position: 84.22

GC content: 65.43

Gene sequence:

>1215_bases
ATGAAAAGAACCATCAGCGCGCTGGCCCTTCTGGCCGGCCTCGCGCCGGGGATCGCCTCGGCCGACAGCACCGTCCGCTT
CTGGTATCACTTCGACAATCCGGAGAACCCGATGTCGGATCTGGTGGCCAAGTTCGAGGAAGCGAACCCGGGCATCAGGA
TCGACGCGCAGAACGTGCCCTGGAACAGCTATTACGACAATCTCTACACGGCCATCGTCGGCGGCAACGCGCCCGACGCG
GCCATGCTGAAGATGTTCGCCCTGCCGCGCCTTCTCGAGATGGAGGCGCTCGAGCCGCTCGACGAGATGATCGCGGGCTG
GGAGGGCCGCGACGACATCCTCGACAATCTCTTCGACCTGACCGAGGCCGAGGATGGCAAGCACTATTACCTGCCGGTGC
AATATGTGGCGCTCTACCTCTATTACCGCGCCGACATGTTCGAGGAGCTGGGCCTCGCCCCGCCCGAGACCTGCGACCAG
TTCCGCGAAGCCGCGATCAAGCTCACCCGCGACACGAACAACGACGGCAAGATCGACACCTACGGGTTCGGCTTCCGCGG
CGGCAAGTCCGGGCACGAACATTGGGGCGCCTTCACGCTGGGCCGCGAGGGCGTGGCGCTCGACGAGAGCCTCACCTCCG
AGGCCGGCGTGGCGGGCACGCAGTTCGTGGTGGATCTCTTCCAGAAGGACAAGGTCTTCCCGCCCTCGGCCCCGAACGAC
GGCTTTCAGGAGATCATCGGCGCCTTCAAGACCGGCGTGACCGCGATGACGATCCACCATGTCGGCTCCTCGAACGATCT
GGTGGCGGCACTGGGCGACAAGGTCGCGGCGGTGCCGGTGCCAGAATGCGGCGGCGGGCGCTGGACCACCTTCGGCGACG
AATCCACCGGGGTCTTCAGCAATGCCAGCGACAAGGAAGCCGCCTGGAAGTGGATCTCGTTCCTTTCGTCGGAGGGCAAC
AACGCGCTCTTCAACAGCGCCACGGGCCAGCTTCCGGTGACCAAGAGCGACAGCGCCACCTGGGACCAGCACGAGAAGCG
CTTCGTCGACGCGACCCAGGCCTCGCTCCCCTTCGCCCATCTGCTGCCCGCCTCCTCGGCCACGCCCGAGTTCGTGAACA
CCGTCTGGCCCACGAACATGCAGCGCGCGCTGAACGGGGAGATCACCGCCGCCCAGATGAACGAAGCCATCGCCAAGCTC
TTCGCCGAAGAGTGA

Upstream 100 bases:

>100_bases
AGTCGGTGGCGGCCTACCGCCGGGCGGGCGAGGTGTTCCGGGCGCTCACCTGACCGCCGCCCCGGGCGGCGAACGTTTCT
CGATTTTGGGAGGAGAGAGA

Downstream 100 bases:

>100_bases
CGGTGCAGGGCCGGGGCGCTCCCTCCCCGGCCCGCCTTCTTCCCGAACCATCCGACGCGCCGCCCGCGTCCGAGCCTGAC
CCGCCTGCCGGCCCTCCGCG

Product: ABC sugar transporter, periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKRTISALALLAGLAPGIASADSTVRFWYHFDNPENPMSDLVAKFEEANPGIRIDAQNVPWNSYYDNLYTAIVGGNAPDA
AMLKMFALPRLLEMEALEPLDEMIAGWEGRDDILDNLFDLTEAEDGKHYYLPVQYVALYLYYRADMFEELGLAPPETCDQ
FREAAIKLTRDTNNDGKIDTYGFGFRGGKSGHEHWGAFTLGREGVALDESLTSEAGVAGTQFVVDLFQKDKVFPPSAPND
GFQEIIGAFKTGVTAMTIHHVGSSNDLVAALGDKVAAVPVPECGGGRWTTFGDESTGVFSNASDKEAAWKWISFLSSEGN
NALFNSATGQLPVTKSDSATWDQHEKRFVDATQASLPFAHLLPASSATPEFVNTVWPTNMQRALNGEITAAQMNEAIAKL
FAEE

Sequences:

>Translated_404_residues
MKRTISALALLAGLAPGIASADSTVRFWYHFDNPENPMSDLVAKFEEANPGIRIDAQNVPWNSYYDNLYTAIVGGNAPDA
AMLKMFALPRLLEMEALEPLDEMIAGWEGRDDILDNLFDLTEAEDGKHYYLPVQYVALYLYYRADMFEELGLAPPETCDQ
FREAAIKLTRDTNNDGKIDTYGFGFRGGKSGHEHWGAFTLGREGVALDESLTSEAGVAGTQFVVDLFQKDKVFPPSAPND
GFQEIIGAFKTGVTAMTIHHVGSSNDLVAALGDKVAAVPVPECGGGRWTTFGDESTGVFSNASDKEAAWKWISFLSSEGN
NALFNSATGQLPVTKSDSATWDQHEKRFVDATQASLPFAHLLPASSATPEFVNTVWPTNMQRALNGEITAAQMNEAIAKL
FAEE
>Mature_404_residues
MKRTISALALLAGLAPGIASADSTVRFWYHFDNPENPMSDLVAKFEEANPGIRIDAQNVPWNSYYDNLYTAIVGGNAPDA
AMLKMFALPRLLEMEALEPLDEMIAGWEGRDDILDNLFDLTEAEDGKHYYLPVQYVALYLYYRADMFEELGLAPPETCDQ
FREAAIKLTRDTNNDGKIDTYGFGFRGGKSGHEHWGAFTLGREGVALDESLTSEAGVAGTQFVVDLFQKDKVFPPSAPND
GFQEIIGAFKTGVTAMTIHHVGSSNDLVAALGDKVAAVPVPECGGGRWTTFGDESTGVFSNASDKEAAWKWISFLSSEGN
NALFNSATGQLPVTKSDSATWDQHEKRFVDATQASLPFAHLLPASSATPEFVNTVWPTNMQRALNGEITAAQMNEAIAKL
FAEE

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 44074; Mature: 44074

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTISALALLAGLAPGIASADSTVRFWYHFDNPENPMSDLVAKFEEANPGIRIDAQNVP
CCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCC
WNSYYDNLYTAIVGGNAPDAAMLKMFALPRLLEMEALEPLDEMIAGWEGRDDILDNLFDL
CHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHH
TEAEDGKHYYLPVQYVALYLYYRADMFEELGLAPPETCDQFREAAIKLTRDTNNDGKIDT
HCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCCCEEE
YGFGFRGGKSGHEHWGAFTLGREGVALDESLTSEAGVAGTQFVVDLFQKDKVFPPSAPND
CCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCH
GFQEIIGAFKTGVTAMTIHHVGSSNDLVAALGDKVAAVPVPECGGGRWTTFGDESTGVFS
HHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCC
NASDKEAAWKWISFLSSEGNNALFNSATGQLPVTKSDSATWDQHEKRFVDATQASLPFAH
CCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
LLPASSATPEFVNTVWPTNMQRALNGEITAAQMNEAIAKLFAEE
HCCCCCCCHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRTISALALLAGLAPGIASADSTVRFWYHFDNPENPMSDLVAKFEEANPGIRIDAQNVP
CCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCC
WNSYYDNLYTAIVGGNAPDAAMLKMFALPRLLEMEALEPLDEMIAGWEGRDDILDNLFDL
CHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHH
TEAEDGKHYYLPVQYVALYLYYRADMFEELGLAPPETCDQFREAAIKLTRDTNNDGKIDT
HCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCCCEEE
YGFGFRGGKSGHEHWGAFTLGREGVALDESLTSEAGVAGTQFVVDLFQKDKVFPPSAPND
CCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCH
GFQEIIGAFKTGVTAMTIHHVGSSNDLVAALGDKVAAVPVPECGGGRWTTFGDESTGVFS
HHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCC
NASDKEAAWKWISFLSSEGNNALFNSATGQLPVTKSDSATWDQHEKRFVDATQASLPFAH
CCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
LLPASSATPEFVNTVWPTNMQRALNGEITAAQMNEAIAKLFAEE
HCCCCCCCHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA