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The map label for this gene is betI [H]

Identifier: 77465528

GI number: 77465528

Start: 609070

End: 609720

Strand: Reverse

Name: betI [H]

Synonym: RSP_3528

Alternate gene names: 77465528

Gene position: 609720-609070 (Counterclockwise)

Preceding gene: 77465529

Following gene: 77465525

Centisome position: 64.66

GC content: 67.59

Gene sequence:

>651_bases
ATGACCGAGCCGAAACCGAGAGCGAGACGCAGCGGCGCTGCCCCGGCCAGGACCCGCGACGATCAGGTGGTGGACCGGCG
CCGGTCGCTGCTGAAGGCGGCGGTGAAGGTGATCTCGAAGCGCGGCCTCACGGGGGTCACGATCAATTCCATCGCCGCCG
AGGCGAAATGTTCCTATGGTGTGGTCGCCTTCCACTTCCAGTCGAAGGAAGGCATCATCTTCGCCGCGCTGGACCATACG
GCTGCGGAATACGAGGCCTATCTGGCGCAGCTGAACGCTTCGCAGCGCGGCCCGGCCGAGCGGATCCGGCACATGATCGA
CACGGACTTCAGCCGCAAGGCGGCGGGGCACGAGTCCATCGCGCTCTGGCTCGCCTTCTGGGCCGAAGCCGCGCGCGTGC
CGAGCTTCCGGCAGCGCTGCGCCGCGCTCCGGGTTCAGTATAACGAGGCGGTCGCCGCCGATGTGGCCGAGCTTGCGGCG
CTGCGCGGGCGGACGGTCGAGGCCGAGCAGGTGGCGCTGACGCTGAACGCCATGATCTCGGGGCTCTGGGTCGAGAATCT
GCTTCTGCCCATCACCATCGCAGAGGGGCAGAAGCGCGGGCACGATGCCTCGCTGGCCTATCTGAGGCTGATCTTCCCCG
ACGACTTCTGA

Upstream 100 bases:

>100_bases
GGTCTCGACACCGCCGCAACTTGACTTTGCCCTTCCGCCCTTTATTCCCGAGGGGACTGCGCCGCTCCCACGATCCTGCC
GCAAAGTGACCCAAGCTCCC

Downstream 100 bases:

>100_bases
CTCCGCGGGGGGCGGCTGAGGGCTCAGCCGCGCTCCGCCTCATATCCCTTCAGAAGCTGCACGACATTCTCGCCGATGGC
CTCGATGGCATAGCCGCCCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTEPKPRARRSGAAPARTRDDQVVDRRRSLLKAAVKVISKRGLTGVTINSIAAEAKCSYGVVAFHFQSKEGIIFAALDHT
AAEYEAYLAQLNASQRGPAERIRHMIDTDFSRKAAGHESIALWLAFWAEAARVPSFRQRCAALRVQYNEAVAADVAELAA
LRGRTVEAEQVALTLNAMISGLWVENLLLPITIAEGQKRGHDASLAYLRLIFPDDF

Sequences:

>Translated_216_residues
MTEPKPRARRSGAAPARTRDDQVVDRRRSLLKAAVKVISKRGLTGVTINSIAAEAKCSYGVVAFHFQSKEGIIFAALDHT
AAEYEAYLAQLNASQRGPAERIRHMIDTDFSRKAAGHESIALWLAFWAEAARVPSFRQRCAALRVQYNEAVAADVAELAA
LRGRTVEAEQVALTLNAMISGLWVENLLLPITIAEGQKRGHDASLAYLRLIFPDDF
>Mature_215_residues
TEPKPRARRSGAAPARTRDDQVVDRRRSLLKAAVKVISKRGLTGVTINSIAAEAKCSYGVVAFHFQSKEGIIFAALDHTA
AEYEAYLAQLNASQRGPAERIRHMIDTDFSRKAAGHESIALWLAFWAEAARVPSFRQRCAALRVQYNEAVAADVAELAAL
RGRTVEAEQVALTLNAMISGLWVENLLLPITIAEGQKRGHDASLAYLRLIFPDDF

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=162, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23758; Mature: 23627

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPKPRARRSGAAPARTRDDQVVDRRRSLLKAAVKVISKRGLTGVTINSIAAEAKCSYG
CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCC
VVAFHFQSKEGIIFAALDHTAAEYEAYLAQLNASQRGPAERIRHMIDTDFSRKAAGHESI
EEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHCCCHHH
ALWLAFWAEAARVPSFRQRCAALRVQYNEAVAADVAELAALRGRTVEAEQVALTLNAMIS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GLWVENLLLPITIAEGQKRGHDASLAYLRLIFPDDF
HHHHHHHEEEEEECCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
TEPKPRARRSGAAPARTRDDQVVDRRRSLLKAAVKVISKRGLTGVTINSIAAEAKCSYG
CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCC
VVAFHFQSKEGIIFAALDHTAAEYEAYLAQLNASQRGPAERIRHMIDTDFSRKAAGHESI
EEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHCCCHHH
ALWLAFWAEAARVPSFRQRCAALRVQYNEAVAADVAELAALRGRTVEAEQVALTLNAMIS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GLWVENLLLPITIAEGQKRGHDASLAYLRLIFPDDF
HHHHHHHEEEEEECCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA