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The map label for this gene is qseB [H]

Identifier: 77465432

GI number: 77465432

Start: 501245

End: 501910

Strand: Direct

Name: qseB [H]

Synonym: RSP_3430

Alternate gene names: 77465432

Gene position: 501245-501910 (Clockwise)

Preceding gene: 77465431

Following gene: 77465433

Centisome position: 53.15

GC content: 72.82

Gene sequence:

>666_bases
GTGATGCGGATTCTGATCGTCGAGGATGATCCGGTGCTGGCGGACGGGCTGCAGGTGGGCCTCCGGCTGGCGGGCTTCGT
GCCCGAAGCGGTGGGCACGCTGGAGGATGCGCGCGCGGCGCTGGATGCCGGCCGGTTCGAGGCGATGGTGCTCGACCTGA
TGCTGCCCGACGGCTCGGGGCTCGAGCTTCTCGCCGAGCTTCGGGCCGCGCGCGAGGCGGTGCCGGTGCTGGTGCTGACG
GCGCGCGACCGGCTCGACGACCGGGTGCGGGGGCTGGATCTCGGCGCGGACGACTATCTTGGCAAGCCCTTCGAGCTAGA
GGAGCTGGCGGCCCGCCTGCGCGCCCTCGGCCGCCGCCCCGCGGCGCTGGCCACCACCCGGCCCGAATGGAACGGCGTGG
CCCTCGACCTCGCGGCGATGGAGGCCTCGCGCGATGGCCGGCCCGTGGCGCTCTCGCCGCGGGAGTTCGCGGTCCTCCGC
GCCCTCATGGCCCACCCCCGCGCGATCCTGAGCAAGGCCCAGATCGAGGAGCAGCTCTACGGCTGGCAGGAGGAGATCGA
GAGCAACGCGATCGAGGTCCATGTCCACAAGCTGCGTGCCAAGCTCGGGCACGGCTTCATCGAGACGGTGCGCGGCGTGG
GCTATCGGCTGGCGGAGGCCTCGTGA

Upstream 100 bases:

>100_bases
CGTCTTCTCCGTCTGAAGCCGCCCCTCCGTCCCCCCGCGGCGCAGATCGCCATTCGCCCCGCGCGCGGCGCGTGCTAGCT
CCGGGGCAACGGAAGGGGCG

Downstream 100 bases:

>100_bases
GTTCGATCCAGCGCCGCCTGTTTCTCGTCCTTCTCGCCGCCACCGGAGCGATCTGGCTCTCGGCCGCGCTCTGGGTCCAT
TCCTCGACGCGGACCGAGCT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MMRILIVEDDPVLADGLQVGLRLAGFVPEAVGTLEDARAALDAGRFEAMVLDLMLPDGSGLELLAELRAAREAVPVLVLT
ARDRLDDRVRGLDLGADDYLGKPFELEELAARLRALGRRPAALATTRPEWNGVALDLAAMEASRDGRPVALSPREFAVLR
ALMAHPRAILSKAQIEEQLYGWQEEIESNAIEVHVHKLRAKLGHGFIETVRGVGYRLAEAS

Sequences:

>Translated_221_residues
MMRILIVEDDPVLADGLQVGLRLAGFVPEAVGTLEDARAALDAGRFEAMVLDLMLPDGSGLELLAELRAAREAVPVLVLT
ARDRLDDRVRGLDLGADDYLGKPFELEELAARLRALGRRPAALATTRPEWNGVALDLAAMEASRDGRPVALSPREFAVLR
ALMAHPRAILSKAQIEEQLYGWQEEIESNAIEVHVHKLRAKLGHGFIETVRGVGYRLAEAS
>Mature_221_residues
MMRILIVEDDPVLADGLQVGLRLAGFVPEAVGTLEDARAALDAGRFEAMVLDLMLPDGSGLELLAELRAAREAVPVLVLT
ARDRLDDRVRGLDLGADDYLGKPFELEELAARLRALGRRPAALATTRPEWNGVALDLAAMEASRDGRPVALSPREFAVLR
ALMAHPRAILSKAQIEEQLYGWQEEIESNAIEVHVHKLRAKLGHGFIETVRGVGYRLAEAS

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=48.1651376146789, Blast_Score=190, Evalue=8e-50,
Organism=Escherichia coli, GI1790552, Length=217, Percent_Identity=42.3963133640553, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=37.5565610859729, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=37.7272727272727, Blast_Score=141, Evalue=3e-35,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=35.4260089686099, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=36.6515837104072, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=35.5555555555556, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=36.6071428571429, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786911, Length=234, Percent_Identity=37.6068376068376, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1788394, Length=221, Percent_Identity=33.4841628959276, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI2367329, Length=234, Percent_Identity=35.042735042735, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1787229, Length=223, Percent_Identity=31.8385650224215, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=30.4347826086957, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24116; Mature: 24116

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRILIVEDDPVLADGLQVGLRLAGFVPEAVGTLEDARAALDAGRFEAMVLDLMLPDGSG
CEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHEEEEEEECCCCCC
LELLAELRAAREAVPVLVLTARDRLDDRVRGLDLGADDYLGKPFELEELAARLRALGRRP
HHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHCCCC
AALATTRPEWNGVALDLAAMEASRDGRPVALSPREFAVLRALMAHPRAILSKAQIEEQLY
CEEECCCCCCCCEEEEHHHHHCCCCCCCEEECHHHHHHHHHHHHCHHHHHHHHHHHHHHH
GWQEEIESNAIEVHVHKLRAKLGHGFIETVRGVGYRLAEAS
CHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCCC
>Mature Secondary Structure
MMRILIVEDDPVLADGLQVGLRLAGFVPEAVGTLEDARAALDAGRFEAMVLDLMLPDGSG
CEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHEEEEEEECCCCCC
LELLAELRAAREAVPVLVLTARDRLDDRVRGLDLGADDYLGKPFELEELAARLRALGRRP
HHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHCCCC
AALATTRPEWNGVALDLAAMEASRDGRPVALSPREFAVLRALMAHPRAILSKAQIEEQLY
CEEECCCCCCCCEEEEHHHHHCCCCCCCEEECHHHHHHHHHHHHCHHHHHHHHHHHHHHH
GWQEEIESNAIEVHVHKLRAKLGHGFIETVRGVGYRLAEAS
CHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]