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The map label for this gene is mmgC [H]

Identifier: 77465195

GI number: 77465195

Start: 233962

End: 235095

Strand: Reverse

Name: mmgC [H]

Synonym: RSP_3182

Alternate gene names: 77465195

Gene position: 235095-233962 (Counterclockwise)

Preceding gene: 77465196

Following gene: 77465194

Centisome position: 24.93

GC content: 71.16

Gene sequence:

>1134_bases
ATGAGCGTCCTGACCGACGAGCAGCGCCTCGTGCAGGAGATGGCGCGCACCTTCGCCCGCGAGGTGCTGGCACCCGGCGC
CGCGGCCCGCGCGAAGGCCAAGGCGATCGAGCCGGCCGTGCTCGCGCAGATGGGCGAGCTCGGGTTCTTCGGCATGACGG
TGCCCGAGGAGATGGGCGGCGTCGGCGCCGACTATATGAGCTATGCGCTGGCGCTGATCGAGATCGCGGCGGGCGACGGC
GCGGTCTCGACGGTGATGAGCGTGCATAACGCCCCCTTCAACGCGATCCTCCAGCGGTTCGCGAGCCCCGCGCAGCGCGA
GAGGGTGCTGCGGCCGGCGGCACAGGGCGCCTTCATCGGCGCCTTCGCCCTGACCGAGGCCCATGCGGGTTCGGACGCCT
CGGCGCTGCGCAGCCGGGCGCGGCGCGCGGGCGGAGACTATGTGATCGACGGCGAGAAGGTCTTCATCACCTCGGGGCGG
CTCGCGGGCTGGGCAATCCTGTTCGCGCGGATGGAGGGAAGCACGGGCAAGGAGGGCATCACCTGCTTCCTCACCCCCAC
CGACACGCCGGGCTACGAGGTGGTCAAGGTCGAGGACAAGCTCGGGCAGGAGGCGTCCGACACCTGCGCGCTGCGCTTCG
ACAGCCTGCGGGTGCCCGAGGCGCTGCGGATCGGGGCCGAGGGCGAGGGCTACCGGATCGCGCTCTCCAGCCTCGAGACC
GGGCGCATCGGCATCGCGGCCCAGTCGGTCGGCATGGCGCAGGCGGCGCTCGAGGCGGCGGTGGCCTATGCGCGCGAGCG
GACCTCGTTCGGGCGGCCGCTGATCGAGCATCAGGCGGTGGGCTTCCGGCTTGCCGAGGCGAAGACGCGGCTCGAGGCGG
CGCGGCAGATGGTGCTTCATGCGGCGCGGATGAAGGATGCGGGCCAGCCCTGCCTGACCGAGGCCGCGATGGCCAAGCTC
TTCGCCTCGGAGGCGGCCGAGCGGATCGTGTCGGACGCGATCCAGACCTTCGGCGGCTACGGCTACAGCCGCGACTTTCC
CGTGGAGCGGATCTACCGCGATGTCCGGGTGTGCCAGATCTACGAGGGCACCTCGGACATCCAGAAGATGCTGATCCTCA
GGGGCATGGCGTGA

Upstream 100 bases:

>100_bases
GGCCGGCCGAATTCGCGGCCCTTGCGCTCCACATCCTGTCGAACCCCATGTTGAACGGCGAGACGATCCGGCTCGACGGC
GCGCTGCGGATGGCACCGAA

Downstream 100 bases:

>100_bases
GCCTCGCCGAGGGCGGGCCGGAGGCTTCCGGAGAAGCCCCTGCCGGACCGCTGGCGGGGCTGCGGATCGTCGAGATGGTG
GGCCTCGGCCCCTGCCCCTT

Product: Acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSVLTDEQRLVQEMARTFAREVLAPGAAARAKAKAIEPAVLAQMGELGFFGMTVPEEMGGVGADYMSYALALIEIAAGDG
AVSTVMSVHNAPFNAILQRFASPAQRERVLRPAAQGAFIGAFALTEAHAGSDASALRSRARRAGGDYVIDGEKVFITSGR
LAGWAILFARMEGSTGKEGITCFLTPTDTPGYEVVKVEDKLGQEASDTCALRFDSLRVPEALRIGAEGEGYRIALSSLET
GRIGIAAQSVGMAQAALEAAVAYARERTSFGRPLIEHQAVGFRLAEAKTRLEAARQMVLHAARMKDAGQPCLTEAAMAKL
FASEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQIYEGTSDIQKMLILRGMA

Sequences:

>Translated_377_residues
MSVLTDEQRLVQEMARTFAREVLAPGAAARAKAKAIEPAVLAQMGELGFFGMTVPEEMGGVGADYMSYALALIEIAAGDG
AVSTVMSVHNAPFNAILQRFASPAQRERVLRPAAQGAFIGAFALTEAHAGSDASALRSRARRAGGDYVIDGEKVFITSGR
LAGWAILFARMEGSTGKEGITCFLTPTDTPGYEVVKVEDKLGQEASDTCALRFDSLRVPEALRIGAEGEGYRIALSSLET
GRIGIAAQSVGMAQAALEAAVAYARERTSFGRPLIEHQAVGFRLAEAKTRLEAARQMVLHAARMKDAGQPCLTEAAMAKL
FASEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQIYEGTSDIQKMLILRGMA
>Mature_376_residues
SVLTDEQRLVQEMARTFAREVLAPGAAARAKAKAIEPAVLAQMGELGFFGMTVPEEMGGVGADYMSYALALIEIAAGDGA
VSTVMSVHNAPFNAILQRFASPAQRERVLRPAAQGAFIGAFALTEAHAGSDASALRSRARRAGGDYVIDGEKVFITSGRL
AGWAILFARMEGSTGKEGITCFLTPTDTPGYEVVKVEDKLGQEASDTCALRFDSLRVPEALRIGAEGEGYRIALSSLETG
RIGIAAQSVGMAQAALEAAVAYARERTSFGRPLIEHQAVGFRLAEAKTRLEAARQMVLHAARMKDAGQPCLTEAAMAKLF
ASEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQIYEGTSDIQKMLILRGMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=369, Percent_Identity=42.8184281842818, Blast_Score=296, Evalue=1e-80,
Organism=Homo sapiens, GI4501859, Length=368, Percent_Identity=38.8586956521739, Blast_Score=288, Evalue=4e-78,
Organism=Homo sapiens, GI4557231, Length=374, Percent_Identity=34.2245989304813, Blast_Score=231, Evalue=6e-61,
Organism=Homo sapiens, GI187960098, Length=374, Percent_Identity=34.2245989304813, Blast_Score=231, Evalue=6e-61,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=33.0666666666667, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI226958414, Length=334, Percent_Identity=34.1317365269461, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI7656849, Length=378, Percent_Identity=34.1269841269841, Blast_Score=211, Evalue=8e-55,
Organism=Homo sapiens, GI21361497, Length=351, Percent_Identity=37.037037037037, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI4501857, Length=379, Percent_Identity=30.0791556728232, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI76496475, Length=385, Percent_Identity=33.7662337662338, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI4557235, Length=385, Percent_Identity=33.7662337662338, Blast_Score=185, Evalue=6e-47,
Organism=Homo sapiens, GI4503943, Length=377, Percent_Identity=27.8514588859416, Blast_Score=141, Evalue=8e-34,
Organism=Homo sapiens, GI7669494, Length=362, Percent_Identity=27.6243093922652, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI48976061, Length=332, Percent_Identity=30.1204819277108, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI211971008, Length=332, Percent_Identity=30.1204819277108, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI38505218, Length=352, Percent_Identity=28.4090909090909, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI218563752, Length=277, Percent_Identity=23.4657039711191, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87081958, Length=375, Percent_Identity=31.4666666666667, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1786223, Length=372, Percent_Identity=27.9569892473118, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI87082384, Length=323, Percent_Identity=28.1733746130031, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87081702, Length=366, Percent_Identity=24.3169398907104, Blast_Score=75, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17508101, Length=365, Percent_Identity=38.0821917808219, Blast_Score=269, Evalue=2e-72,
Organism=Caenorhabditis elegans, GI17506239, Length=368, Percent_Identity=36.9565217391304, Blast_Score=264, Evalue=7e-71,
Organism=Caenorhabditis elegans, GI71990804, Length=288, Percent_Identity=40.9722222222222, Blast_Score=230, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI17538396, Length=376, Percent_Identity=33.2446808510638, Blast_Score=226, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17534899, Length=379, Percent_Identity=33.245382585752, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17570075, Length=374, Percent_Identity=32.3529411764706, Blast_Score=218, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17533517, Length=368, Percent_Identity=33.9673913043478, Blast_Score=214, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI17569725, Length=377, Percent_Identity=32.6259946949602, Blast_Score=214, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI71985184, Length=380, Percent_Identity=32.8947368421053, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17551932, Length=360, Percent_Identity=33.6111111111111, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17505929, Length=377, Percent_Identity=31.8302387267904, Blast_Score=174, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI32563615, Length=230, Percent_Identity=35.6521739130435, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI71982178, Length=271, Percent_Identity=29.520295202952, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17534353, Length=376, Percent_Identity=25.2659574468085, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71985192, Length=328, Percent_Identity=31.4024390243902, Blast_Score=138, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17531909, Length=233, Percent_Identity=33.0472103004292, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17531913, Length=171, Percent_Identity=36.8421052631579, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17562446, Length=277, Percent_Identity=28.5198555956679, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI86563381, Length=323, Percent_Identity=28.4829721362229, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI86563383, Length=323, Percent_Identity=28.4829721362229, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24646207, Length=372, Percent_Identity=42.741935483871, Blast_Score=300, Evalue=9e-82,
Organism=Drosophila melanogaster, GI21356377, Length=372, Percent_Identity=40.8602150537634, Blast_Score=284, Evalue=7e-77,
Organism=Drosophila melanogaster, GI24666513, Length=368, Percent_Identity=39.4021739130435, Blast_Score=283, Evalue=1e-76,
Organism=Drosophila melanogaster, GI24660351, Length=376, Percent_Identity=34.5744680851064, Blast_Score=235, Evalue=5e-62,
Organism=Drosophila melanogaster, GI21355753, Length=376, Percent_Identity=34.0425531914894, Blast_Score=208, Evalue=4e-54,
Organism=Drosophila melanogaster, GI281363737, Length=381, Percent_Identity=33.0708661417323, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI19920834, Length=379, Percent_Identity=28.7598944591029, Blast_Score=149, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40344; Mature: 40212

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLTDEQRLVQEMARTFAREVLAPGAAARAKAKAIEPAVLAQMGELGFFGMTVPEEMGG
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHCC
VGADYMSYALALIEIAAGDGAVSTVMSVHNAPFNAILQRFASPAQRERVLRPAAQGAFIG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHH
AFALTEAHAGSDASALRSRARRAGGDYVIDGEKVFITSGRLAGWAILFARMEGSTGKEGI
HHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHEEEEECCCCCCCCE
TCFLTPTDTPGYEVVKVEDKLGQEASDTCALRFDSLRVPEALRIGAEGEGYRIALSSLET
EEEEECCCCCCEEEEEEHHHHCCCCCCCEEEEECCCCCCHHHEECCCCCCEEEEEECCCC
GRIGIAAQSVGMAQAALEAAVAYARERTSFGRPLIEHQAVGFRLAEAKTRLEAARQMVLH
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH
AARMKDAGQPCLTEAAMAKLFASEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQI
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEE
YEGTSDIQKMLILRGMA
ECCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVLTDEQRLVQEMARTFAREVLAPGAAARAKAKAIEPAVLAQMGELGFFGMTVPEEMGG
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHCC
VGADYMSYALALIEIAAGDGAVSTVMSVHNAPFNAILQRFASPAQRERVLRPAAQGAFIG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHH
AFALTEAHAGSDASALRSRARRAGGDYVIDGEKVFITSGRLAGWAILFARMEGSTGKEGI
HHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHEEEEECCCCCCCCE
TCFLTPTDTPGYEVVKVEDKLGQEASDTCALRFDSLRVPEALRIGAEGEGYRIALSSLET
EEEEECCCCCCEEEEEEHHHHCCCCCCCEEEEECCCCCCHHHEECCCCCCEEEEEECCCC
GRIGIAAQSVGMAQAALEAAVAYARERTSFGRPLIEHQAVGFRLAEAKTRLEAARQMVLH
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH
AARMKDAGQPCLTEAAMAKLFASEAAERIVSDAIQTFGGYGYSRDFPVERIYRDVRVCQI
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEE
YEGTSDIQKMLILRGMA
ECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]