Definition Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence.
Accession NC_007494
Length 943,016

Click here to switch to the map view.

The map label for this gene is iorB [H]

Identifier: 77465177

GI number: 77465177

Start: 216988

End: 219123

Strand: Reverse

Name: iorB [H]

Synonym: RSP_3163

Alternate gene names: 77465177

Gene position: 219123-216988 (Counterclockwise)

Preceding gene: 77465178

Following gene: 77465176

Centisome position: 23.24

GC content: 70.83

Gene sequence:

>2136_bases
ATGACCATGCTCTCGCGCCGCCGCTTCCTCGCCTCGACCGCGGGCTTCACCCTCGCCCTCGTGCTGCCCACTCCCTTCGC
CCGGGCGCAGGGCGCGCCGCCGGACCTGCCCGCCACGCCCAACGCCTTCATCCGCGTGGGCGCGGACGATACGGTGACGG
TCATCATCAAGCATCTCGAGATGGGCCAGGGCCCCTACACCGGCCTTGCGACGCTGGTGGCCGAGGAGATGGACGCGGAC
TGGAGCCAGATGCGCGCCGAAGCGGCCCCCGCCGACGATGCGCTCTACAAGAACCTTGCCTTCGGGGCGCAGGGCACCGG
CGGCTCGACCGCCATCGCCAACAGCTACATCCAGATGCGCAAGGCGGGTGCTGCGGCCCGCGCCATGCTGGTCGAGGCCG
CAGCCGAGGAATGGGGCGTGGCGGCCTCCGAGATCGCCGTCCGCGCGGGGCGGCTCTCGCATCCCGGCGGCAAAGAGGCG
GGCTTCGGCGCCTTCGCGGCCGCCGCGGCCGAGCGCGCGGTGCCGCAGGATCCGCCGCTGAAGGACCCGTCGCAGTTCGT
GCTGATCGGCGGCACGGGCAAGCGGCTCGATTCCGCCGCCAAGTCGGACGGCACCGCCGAATTCACGCTCGACATCTACC
GCGAGGGGATGCTGACGGTCGTGGTGGCCCATCCGCCCGCCTTCGGCGCCACCGTGGCCTCCTATGACGATGCCCGCGCG
CTGAAGGTGAAGGGCGTGGAGATGGTGCGCCAGATCCCCGAGGGGATCGCGGTCTATGCCCGCAACACCTTCGCCGCCAT
CAAGGGCCGCGACGCGCTGGAGATCCGCTGGGACGAGAGCAAGGCCGAGCGGCGCAGCTCCTCCGCCATGCTGGAAGACA
TGGCCGGTGCGCTGGCCGAGGCCCGGGTGGTCGAGGAATCCGGCGACAAGGGCGCCATCGAGGGCGCCGCCGAGGTGCTT
CAGGCCGATTACCGCTTCCCCTATCTCGCCCATGCGCCGATGGAGCCGCTCGATGCGGTGATCGAGGTGAAGGAGGGCCG
CGCCGAGCTCTGGTATGGCTGCCAGTTCCCCTCGATCGACCGGCCGACCGTGGCCCAGACCCTCGGCCTTCCGATGGAGT
CCGTCAGGATCAACGTGCTCCTCGCGGGCGGCTCGTTCGGGCGGCGCGCGCAGGGCAACGGGCATCTCGCCGCCGAAATC
GCCCATATCGCGCAGGCCGCCGGGCGCGACGGCGCCTTCAAGCTGCTCTGGACCCGCGAGGACGATCTGAAGGGCGGCTA
CTACCGCCCGATGACGCTCCACCGGCTGCGTGCCGGTCTCGATGCCGAGGGCCGGATCGTCGGCTGGGAGAATGCCGTCG
CGAACCAGTCGATCATGGCAGGCACCGCGCTCGAGGCCTTCATGCAGGACGGGCTGGATCCCAGCTCCTACGAGGGATCG
AACGATCTGCCCTACGACGTGGGGGCGCGACGCATCTCCTGGGCGCGGGTGGAAAGCCCGGTGCCCGTGCTCTGGTGGCG
CTCGGTCGGCCACACGCACACGGCCTTCGCGGTCGAGGTCTTCCTCGACGAGGTGCTCGAGCGGGCGGGCAAGGATCCGG
TGCAGGGGCGGCTCGATCTGATGACGCCCGAGGCGGGGCGCTACCGCGGCGTGCTGGAAAAGGTGGCCGAGATCGCGGAC
TGGCAGGGCCGCACCCGCGAGGGACGCGCCTATGGCGTGGCGGTCGCCAAGAGCTTCGGCACCTATGTGGCCCAGATCGT
CGAGGTCGAGAACGGCGGGGCGCTGCCGAAGGTCACGCAGGTCTGGTGCGCCGTCGATTGCGGCGTGGCGGTCAACCCCG
ACGTGATCCGCGCCCAGATGGAGGGCGGCATCGGCTATGCGCTTTCGGCCGCGCTTTACAGCGCGATCACGCTCGATGGC
GAGGGGCGGGTGCAGCAGTCGAACTTCGACGATTACCGCCTGTTGCGCATCCACGAGATGCCGCAGGTCCATGTGGCGAT
CCTGCCCTCGACCGAGCCGCCCACCGGCGTGGGCGAGCCCGGCGTGCCGCCGCTTGCCCCGGCCGTGGCGAATGCCTGGC
GCGCCCTCACGGGTCAGCCGGTGCGCCAGCTTCCCTTCGCGCAACTTCTGTCCTGA

Upstream 100 bases:

>100_bases
GATCGATCACGCGATGGGCGGCAACCTCTGCCGCTGCGCCACCTATGTCCGCATCCGGCAGGCGATCCATGACGCCGCCC
GCACCCTGGAGGGCTGAGCC

Downstream 100 bases:

>100_bases
GGTGACCATGCGCCTTTCCTTCCTCGCCGCAGCAATGCTCGCGGCGGCCCCTGCGCTCGCGCAGGACCTGCGCGGGCCCG
ACGCCTTCGCCGACATCGCC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 711; Mature: 710

Protein sequence:

>711_residues
MTMLSRRRFLASTAGFTLALVLPTPFARAQGAPPDLPATPNAFIRVGADDTVTVIIKHLEMGQGPYTGLATLVAEEMDAD
WSQMRAEAAPADDALYKNLAFGAQGTGGSTAIANSYIQMRKAGAAARAMLVEAAAEEWGVAASEIAVRAGRLSHPGGKEA
GFGAFAAAAAERAVPQDPPLKDPSQFVLIGGTGKRLDSAAKSDGTAEFTLDIYREGMLTVVVAHPPAFGATVASYDDARA
LKVKGVEMVRQIPEGIAVYARNTFAAIKGRDALEIRWDESKAERRSSSAMLEDMAGALAEARVVEESGDKGAIEGAAEVL
QADYRFPYLAHAPMEPLDAVIEVKEGRAELWYGCQFPSIDRPTVAQTLGLPMESVRINVLLAGGSFGRRAQGNGHLAAEI
AHIAQAAGRDGAFKLLWTREDDLKGGYYRPMTLHRLRAGLDAEGRIVGWENAVANQSIMAGTALEAFMQDGLDPSSYEGS
NDLPYDVGARRISWARVESPVPVLWWRSVGHTHTAFAVEVFLDEVLERAGKDPVQGRLDLMTPEAGRYRGVLEKVAEIAD
WQGRTREGRAYGVAVAKSFGTYVAQIVEVENGGALPKVTQVWCAVDCGVAVNPDVIRAQMEGGIGYALSAALYSAITLDG
EGRVQQSNFDDYRLLRIHEMPQVHVAILPSTEPPTGVGEPGVPPLAPAVANAWRALTGQPVRQLPFAQLLS

Sequences:

>Translated_711_residues
MTMLSRRRFLASTAGFTLALVLPTPFARAQGAPPDLPATPNAFIRVGADDTVTVIIKHLEMGQGPYTGLATLVAEEMDAD
WSQMRAEAAPADDALYKNLAFGAQGTGGSTAIANSYIQMRKAGAAARAMLVEAAAEEWGVAASEIAVRAGRLSHPGGKEA
GFGAFAAAAAERAVPQDPPLKDPSQFVLIGGTGKRLDSAAKSDGTAEFTLDIYREGMLTVVVAHPPAFGATVASYDDARA
LKVKGVEMVRQIPEGIAVYARNTFAAIKGRDALEIRWDESKAERRSSSAMLEDMAGALAEARVVEESGDKGAIEGAAEVL
QADYRFPYLAHAPMEPLDAVIEVKEGRAELWYGCQFPSIDRPTVAQTLGLPMESVRINVLLAGGSFGRRAQGNGHLAAEI
AHIAQAAGRDGAFKLLWTREDDLKGGYYRPMTLHRLRAGLDAEGRIVGWENAVANQSIMAGTALEAFMQDGLDPSSYEGS
NDLPYDVGARRISWARVESPVPVLWWRSVGHTHTAFAVEVFLDEVLERAGKDPVQGRLDLMTPEAGRYRGVLEKVAEIAD
WQGRTREGRAYGVAVAKSFGTYVAQIVEVENGGALPKVTQVWCAVDCGVAVNPDVIRAQMEGGIGYALSAALYSAITLDG
EGRVQQSNFDDYRLLRIHEMPQVHVAILPSTEPPTGVGEPGVPPLAPAVANAWRALTGQPVRQLPFAQLLS
>Mature_710_residues
TMLSRRRFLASTAGFTLALVLPTPFARAQGAPPDLPATPNAFIRVGADDTVTVIIKHLEMGQGPYTGLATLVAEEMDADW
SQMRAEAAPADDALYKNLAFGAQGTGGSTAIANSYIQMRKAGAAARAMLVEAAAEEWGVAASEIAVRAGRLSHPGGKEAG
FGAFAAAAAERAVPQDPPLKDPSQFVLIGGTGKRLDSAAKSDGTAEFTLDIYREGMLTVVVAHPPAFGATVASYDDARAL
KVKGVEMVRQIPEGIAVYARNTFAAIKGRDALEIRWDESKAERRSSSAMLEDMAGALAEARVVEESGDKGAIEGAAEVLQ
ADYRFPYLAHAPMEPLDAVIEVKEGRAELWYGCQFPSIDRPTVAQTLGLPMESVRINVLLAGGSFGRRAQGNGHLAAEIA
HIAQAAGRDGAFKLLWTREDDLKGGYYRPMTLHRLRAGLDAEGRIVGWENAVANQSIMAGTALEAFMQDGLDPSSYEGSN
DLPYDVGARRISWARVESPVPVLWWRSVGHTHTAFAVEVFLDEVLERAGKDPVQGRLDLMTPEAGRYRGVLEKVAEIADW
QGRTREGRAYGVAVAKSFGTYVAQIVEVENGGALPKVTQVWCAVDCGVAVNPDVIRAQMEGGIGYALSAALYSAITLDGE
GRVQQSNFDDYRLLRIHEMPQVHVAILPSTEPPTGVGEPGVPPLAPAVANAWRALTGQPVRQLPFAQLLS

Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274
- InterPro:   IPR012368
- InterPro:   IPR006311 [H]

Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.3.99.16 [H]

Molecular weight: Translated: 75926; Mature: 75795

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMLSRRRFLASTAGFTLALVLPTPFARAQGAPPDLPATPNAFIRVGADDTVTVIIKHLE
CCCCHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH
MGQGPYTGLATLVAEEMDADWSQMRAEAAPADDALYKNLAFGAQGTGGSTAIANSYIQMR
CCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
KAGAAARAMLVEAAAEEWGVAASEIAVRAGRLSHPGGKEAGFGAFAAAAAERAVPQDPPL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
KDPSQFVLIGGTGKRLDSAAKSDGTAEFTLDIYREGMLTVVVAHPPAFGATVASYDDARA
CCCCCEEEECCCCHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCEECCCCCCCE
LKVKGVEMVRQIPEGIAVYARNTFAAIKGRDALEIRWDESKAERRSSSAMLEDMAGALAE
EEEHHHHHHHHCCCCEEEEECCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH
ARVVEESGDKGAIEGAAEVLQADYRFPYLAHAPMEPLDAVIEVKEGRAELWYGCQFPSID
HHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCC
RPTVAQTLGLPMESVRINVLLAGGSFGRRAQGNGHLAAEIAHIAQAAGRDGAFKLLWTRE
CCHHHHHHCCCHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECC
DDLKGGYYRPMTLHRLRAGLDAEGRIVGWENAVANQSIMAGTALEAFMQDGLDPSSYEGS
CCCCCCEECCHHHHHHHCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
NDLPYDVGARRISWARVESPVPVLWWRSVGHTHTAFAVEVFLDEVLERAGKDPVQGRLDL
CCCCCCCCCCEEEHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
MTPEAGRYRGVLEKVAEIADWQGRTREGRAYGVAVAKSFGTYVAQIVEVENGGALPKVTQ
ECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHEEECCCCCCCHHHH
VWCAVDCGVAVNPDVIRAQMEGGIGYALSAALYSAITLDGEGRVQQSNFDDYRLLRIHEM
HHEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCEECCCCCCEEEEEEECC
PQVHVAILPSTEPPTGVGEPGVPPLAPAVANAWRALTGQPVRQLPFAQLLS
CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHCC
>Mature Secondary Structure 
TMLSRRRFLASTAGFTLALVLPTPFARAQGAPPDLPATPNAFIRVGADDTVTVIIKHLE
CCCHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH
MGQGPYTGLATLVAEEMDADWSQMRAEAAPADDALYKNLAFGAQGTGGSTAIANSYIQMR
CCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
KAGAAARAMLVEAAAEEWGVAASEIAVRAGRLSHPGGKEAGFGAFAAAAAERAVPQDPPL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
KDPSQFVLIGGTGKRLDSAAKSDGTAEFTLDIYREGMLTVVVAHPPAFGATVASYDDARA
CCCCCEEEECCCCHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCEECCCCCCCE
LKVKGVEMVRQIPEGIAVYARNTFAAIKGRDALEIRWDESKAERRSSSAMLEDMAGALAE
EEEHHHHHHHHCCCCEEEEECCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH
ARVVEESGDKGAIEGAAEVLQADYRFPYLAHAPMEPLDAVIEVKEGRAELWYGCQFPSID
HHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCC
RPTVAQTLGLPMESVRINVLLAGGSFGRRAQGNGHLAAEIAHIAQAAGRDGAFKLLWTRE
CCHHHHHHCCCHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECC
DDLKGGYYRPMTLHRLRAGLDAEGRIVGWENAVANQSIMAGTALEAFMQDGLDPSSYEGS
CCCCCCEECCHHHHHHHCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
NDLPYDVGARRISWARVESPVPVLWWRSVGHTHTAFAVEVFLDEVLERAGKDPVQGRLDL
CCCCCCCCCCEEEHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
MTPEAGRYRGVLEKVAEIADWQGRTREGRAYGVAVAKSFGTYVAQIVEVENGGALPKVTQ
ECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHEEECCCCCCCHHHH
VWCAVDCGVAVNPDVIRAQMEGGIGYALSAALYSAITLDGEGRVQQSNFDDYRLLRIHEM
HHEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCEECCCCCCEEEEEEECC
PQVHVAILPSTEPPTGVGEPGVPPLAPAVANAWRALTGQPVRQLPFAQLLS
CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7782304; 8157655 [H]