Definition Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence.
Accession NC_007494
Length 943,016

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The map label for this gene is bacC [H]

Identifier: 77465050

GI number: 77465050

Start: 71772

End: 72530

Strand: Reverse

Name: bacC [H]

Synonym: RSP_3037

Alternate gene names: 77465050

Gene position: 72530-71772 (Counterclockwise)

Preceding gene: 77465051

Following gene: 77465042

Centisome position: 7.69

GC content: 69.7

Gene sequence:

>759_bases
ATGGACCTCAAAGACCGCACAGCCTTCGTCACGGCGGGGGGCGCGGGGATCGGCCGGGCCGGCGCGCTCGCCATGGCCCG
CGCGGGCGCGACCGTGGTCGTCACAGATCTCGACGCTTCGCGGGCGGAGGCGGTCGCTGCCGAGATCGCCGCGGCCGGTG
GCCGGGCGGAAGGTCTCGGGCTGGATGTCGGCGACGATGCCGCTCTCGAGGCGGCCATCCTCTCGGCGGCCGCGCGACAC
GGCAGGCTCGACGTGCTGCATTCCCACGCCGGCGCACAGGTGCCCGGCCGCCTCGATCAGGTGAGCGTCGCCGACATGGA
TCTGTCCTGGCGGCTGAACGTGCGGGCGCATTTCGTCGCGGCCAAGGCCGCCATGTCGATCATGGCCCCGCGCAGACAGG
GCTCGATCATCGTCACCTCGTCGAATTCCGGCGTGCAGTACGATCGCGAGATGATCGCCTATTGCACCACGAAGCACGCG
GTCATCGCCATGGTTCGCCAGATCGCCGTCGATTATGCCCGCCACAACATCCGCTGCAACGCGCTCTGTCCGGGCTTCGT
CGACACCGTCTTCAACGCGGGCTTCGAGGCGCAGATGGGCGGCCGCGCGGCGCTGGAGAGCTACGTCGCCGAGACCATCC
CGATGGGCCGCTTCGGCACCCCGGAGGAAATCGGCGAGGCGGTGCTCTACCTCGCCTCGGATCGCTCCGCCTTCATGACC
GGCCATGCCCTCGTCATCGACGGGGCGGAAAGCCTGTGA

Upstream 100 bases:

>100_bases
CCATCGGCACGATGGTGCTCCTCGCCTCGCTCGTCCTGCTGATCACCGCCCAGGTGATCCTGCGCCGCCGCGCGCGCTGA
CCCCTACCGGAGTGAACTTC

Downstream 100 bases:

>100_bases
TCGGACAGCCATGGCCGCGGGCCGGCCGCCGCCCTGCTGCCATCCGGGGTCACGACGCAGATCGCCGGGCGTGATCGGTC
GGAGCGCGCCATCCCGGGGC

Product: putative short-chain dehydrogenase/reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDLKDRTAFVTAGGAGIGRAGALAMARAGATVVVTDLDASRAEAVAAEIAAAGGRAEGLGLDVGDDAALEAAILSAAARH
GRLDVLHSHAGAQVPGRLDQVSVADMDLSWRLNVRAHFVAAKAAMSIMAPRRQGSIIVTSSNSGVQYDREMIAYCTTKHA
VIAMVRQIAVDYARHNIRCNALCPGFVDTVFNAGFEAQMGGRAALESYVAETIPMGRFGTPEEIGEAVLYLASDRSAFMT
GHALVIDGAESL

Sequences:

>Translated_252_residues
MDLKDRTAFVTAGGAGIGRAGALAMARAGATVVVTDLDASRAEAVAAEIAAAGGRAEGLGLDVGDDAALEAAILSAAARH
GRLDVLHSHAGAQVPGRLDQVSVADMDLSWRLNVRAHFVAAKAAMSIMAPRRQGSIIVTSSNSGVQYDREMIAYCTTKHA
VIAMVRQIAVDYARHNIRCNALCPGFVDTVFNAGFEAQMGGRAALESYVAETIPMGRFGTPEEIGEAVLYLASDRSAFMT
GHALVIDGAESL
>Mature_252_residues
MDLKDRTAFVTAGGAGIGRAGALAMARAGATVVVTDLDASRAEAVAAEIAAAGGRAEGLGLDVGDDAALEAAILSAAARH
GRLDVLHSHAGAQVPGRLDQVSVADMDLSWRLNVRAHFVAAKAAMSIMAPRRQGSIIVTSSNSGVQYDREMIAYCTTKHA
VIAMVRQIAVDYARHNIRCNALCPGFVDTVFNAGFEAQMGGRAALESYVAETIPMGRFGTPEEIGEAVLYLASDRSAFMT
GHALVIDGAESL

Specific function: Part of the bacABCDE operon responsible for the biosynthesis of bacilysin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI66933014, Length=232, Percent_Identity=35.3448275862069, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI40254992, Length=248, Percent_Identity=30.241935483871, Blast_Score=104, Evalue=9e-23,
Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=30.6201550387597, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=29.0322580645161, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI10190704, Length=258, Percent_Identity=32.1705426356589, Blast_Score=91, Evalue=7e-19,
Organism=Homo sapiens, GI59889578, Length=232, Percent_Identity=30.1724137931034, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI7705925, Length=251, Percent_Identity=30.2788844621514, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI4504505, Length=188, Percent_Identity=32.4468085106383, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=26.4, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=23.8461538461538, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI142976729, Length=203, Percent_Identity=24.6305418719212, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI210032110, Length=190, Percent_Identity=24.2105263157895, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI31542939, Length=243, Percent_Identity=24.6913580246914, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI209862901, Length=253, Percent_Identity=26.8774703557312, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI19923983, Length=253, Percent_Identity=26.8774703557312, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI40254986, Length=188, Percent_Identity=28.7234042553192, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=34.3873517786561, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=29.6747967479675, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=28.4, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=30.6451612903226, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1790717, Length=249, Percent_Identity=26.9076305220884, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789378, Length=255, Percent_Identity=32.156862745098, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=29.2682926829268, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1786812, Length=260, Percent_Identity=28.8461538461538, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1789208, Length=247, Percent_Identity=27.1255060728745, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=29.6, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=25.1937984496124, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI2367365, Length=184, Percent_Identity=31.5217391304348, Blast_Score=71, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=30.1158301158301, Blast_Score=117, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=30.6451612903226, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=30.3846153846154, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=27.2030651340996, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17531453, Length=264, Percent_Identity=29.5454545454545, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17562904, Length=277, Percent_Identity=29.9638989169675, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=28.3524904214559, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=28.8973384030418, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=28.2945736434109, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=31.6205533596838, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71994604, Length=244, Percent_Identity=27.4590163934426, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17555706, Length=250, Percent_Identity=32.4, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=28.3524904214559, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71994600, Length=245, Percent_Identity=27.7551020408163, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17568967, Length=190, Percent_Identity=31.5789473684211, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=29.5019157088123, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=27.4436090225564, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17536025, Length=262, Percent_Identity=27.4809160305344, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17538182, Length=259, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=30.5970149253731, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=256, Percent_Identity=25.390625, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=28.3524904214559, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=26.4, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=261, Percent_Identity=27.5862068965517, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=25.8964143426295, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17564282, Length=187, Percent_Identity=26.2032085561497, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17536651, Length=265, Percent_Identity=25.2830188679245, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=27.5471698113208, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=26.2357414448669, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=26.0223048327138, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=210, Percent_Identity=26.1904761904762, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=23.4375, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=23.1578947368421, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193203117, Length=186, Percent_Identity=23.1182795698925, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71997099, Length=207, Percent_Identity=29.4685990338164, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71982365, Length=188, Percent_Identity=26.063829787234, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=198, Percent_Identity=30.8080808080808, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6324126, Length=259, Percent_Identity=25.4826254826255, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=28.515625, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI23397609, Length=255, Percent_Identity=30.5882352941176, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=30.5220883534137, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=29.1497975708502, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=26.9076305220884, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI18859837, Length=188, Percent_Identity=34.5744680851064, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=27.4900398406374, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24640492, Length=192, Percent_Identity=27.0833333333333, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24643142, Length=253, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24644337, Length=255, Percent_Identity=27.4509803921569, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI17737361, Length=260, Percent_Identity=26.5384615384615, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21357673, Length=194, Percent_Identity=27.8350515463918, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26200; Mature: 26200

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MDLKDRTAFVTAGGAGIGRAGALAMARAGATVVVTDLDASRAEAVAAEIAAAGGRAEGLG
CCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCC
LDVGDDAALEAAILSAAARHGRLDVLHSHAGAQVPGRLDQVSVADMDLSWRLNVRAHFVA
CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCEEEEEEEEEEHHH
AKAAMSIMAPRRQGSIIVTSSNSGVQYDREMIAYCTTKHAVIAMVRQIAVDYARHNIRCN
HHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
ALCPGFVDTVFNAGFEAQMGGRAALESYVAETIPMGRFGTPEEIGEAVLYLASDRSAFMT
EECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECCCCEEEE
GHALVIDGAESL
CCEEEEECCCCC
>Mature Secondary Structure
MDLKDRTAFVTAGGAGIGRAGALAMARAGATVVVTDLDASRAEAVAAEIAAAGGRAEGLG
CCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCC
LDVGDDAALEAAILSAAARHGRLDVLHSHAGAQVPGRLDQVSVADMDLSWRLNVRAHFVA
CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCEEEEEEEEEEHHH
AKAAMSIMAPRRQGSIIVTSSNSGVQYDREMIAYCTTKHAVIAMVRQIAVDYARHNIRCN
HHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
ALCPGFVDTVFNAGFEAQMGGRAALESYVAETIPMGRFGTPEEIGEAVLYLASDRSAFMT
EECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECCCCEEEE
GHALVIDGAESL
CCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA