| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is rdxA
Identifier: 77465040
GI number: 77465040
Start: 58502
End: 59911
Strand: Reverse
Name: rdxA
Synonym: RSP_3027
Alternate gene names: 77465040
Gene position: 59911-58502 (Counterclockwise)
Preceding gene: 77465042
Following gene: 77465039
Centisome position: 6.35
GC content: 67.73
Gene sequence:
>1410_bases ATGAGCGAGCCCCTCTACGCCCCGCGAACACCCATCTTTCCGCGCCAGATCTCCGGCGCCTTCCGAACGGCCAAATGGTG GATCCTGGCGGTCAGCCTTGGGATCTACCTCCTCACGCCCTGGCTGCGCTGGGACAGGGGCCCGAACCTTCCCGACCAGG CGGTGCTGATCGACATTGCCGGCCGACGCTTCTTCCTCTTCGGAATCCAGATCTGGCCGCATGAATTCTACTTCGTCGCC GGGTTGCTGATCATGGCCGGCCTCGGGCTGTTCCTGTTCACCTCGGCCGCCGGGCGCGTCTGGTGCGGCTATGCCTGCCC GCAGACGGTGTGGACCGACCTCTTCCTGCTCGTCGAACGCCGCATCGAGGGCGACCGGAACGCCCAGATCCGGCTGCATC GGCAGGCATGGACCGCCGAGAAGGTCTGGAAGCGCCTTCTGAAGTGGAGTGTCTGGGCCGCGATCTCGCTGCTGACCGGC GGCGCCTGGGTCTTCTACTTTGCCGATGCACCGACACTGCTGAACGGCCTCGTGACCCTGACGGCGCATCCCGTCGCCTG GATCACCATTTTCGTCCTGACGGCCACGACCTTTGTCTTTGCCGGTTTCATGCGCGAGCAGATCTGCATCTACGCCTGTC CCTGGCCGCGCATTCAGGCAGCGCTGATGGACGAGGAAACGATCACCGTCGCCTATCGGGACTGGCGCGGGGAGCCGAGA GGCAAGCGCAGCGAGACAGGGCGCGGGGACTGCATAGACTGCATGGCCTGCGTCAACGTCTGCCCCATGGGCATCGACAT CCGCGAGGGCCAGCAGATGGCCTGCATCACCTGCGGCCTGTGCATCGACGCCTGCGACGACACGATGGACAGGATCGGGC GGCCCCGCGGGCTGATCGGCTATCTCGCCCTGAGCGACGAGCATCTGGAGCGGGCGGGTGACACCCCGAAACCCGCCTGG AGGCGGCTCTTCCGCTTGCGGACGTCGCTTTATGCGGTGCTCTGGGCAGGGGTCGGGGTGACGTTGATCGCGGCGCTGCT GCTCCGCCCCGCCGTGGATCTCGCCGTCACTCCGGTGCGCAACCCCCTCTTCGTAACCCTGTCCGACGGCAGCATCCGCA ATGCCTACGAGCTGCGGCTGCGCAACATGAGCGGCGAGGATCGCCGGTTCCGGCTGGCCGTCGACGGGAGCGCAGGGCTT CGGCCCAGCATCGAAGGCAGCGCCGGGCTGGATGTGCCCGTTGCGGCCAACGCCACCGGGCTGGTGCGGCTCTACCTCAC CGCACCGCAGGGATCGGACCCGGCAACGGGCGCGCTGACGGATCTCCGGATCCGGCTGGATGACGCCGGAGGCCCGGAGG GCGGTCCGGTCGCCGCCGTGAAGGCCGCGTTCCACGGCGCCCGATCCTGA
Upstream 100 bases:
>100_bases CTTGCGTCCGGTCTCCGTTCCCGATGCGCCGTCTCTTCTGGCGTGGCACCCGATCCTCCGCCGGCGTTCCGAACGATCCG GCCGCACCGAGAAGCGAACC
Downstream 100 bases:
>100_bases TGCCTCGCGCGCGCGGACGGGCAGCCCCTGCCCGTCCGCCCCGTGCGGCGCTGCGGCATCCCGGCACCGGATTGCCCGAC ATCCGGCTTAGGGCGTAGGG
Product: RdxA, iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSEPLYAPRTPIFPRQISGAFRTAKWWILAVSLGIYLLTPWLRWDRGPNLPDQAVLIDIAGRRFFLFGIQIWPHEFYFVA GLLIMAGLGLFLFTSAAGRVWCGYACPQTVWTDLFLLVERRIEGDRNAQIRLHRQAWTAEKVWKRLLKWSVWAAISLLTG GAWVFYFADAPTLLNGLVTLTAHPVAWITIFVLTATTFVFAGFMREQICIYACPWPRIQAALMDEETITVAYRDWRGEPR GKRSETGRGDCIDCMACVNVCPMGIDIREGQQMACITCGLCIDACDDTMDRIGRPRGLIGYLALSDEHLERAGDTPKPAW RRLFRLRTSLYAVLWAGVGVTLIAALLLRPAVDLAVTPVRNPLFVTLSDGSIRNAYELRLRNMSGEDRRFRLAVDGSAGL RPSIEGSAGLDVPVAANATGLVRLYLTAPQGSDPATGALTDLRIRLDDAGGPEGGPVAAVKAAFHGARS
Sequences:
>Translated_469_residues MSEPLYAPRTPIFPRQISGAFRTAKWWILAVSLGIYLLTPWLRWDRGPNLPDQAVLIDIAGRRFFLFGIQIWPHEFYFVA GLLIMAGLGLFLFTSAAGRVWCGYACPQTVWTDLFLLVERRIEGDRNAQIRLHRQAWTAEKVWKRLLKWSVWAAISLLTG GAWVFYFADAPTLLNGLVTLTAHPVAWITIFVLTATTFVFAGFMREQICIYACPWPRIQAALMDEETITVAYRDWRGEPR GKRSETGRGDCIDCMACVNVCPMGIDIREGQQMACITCGLCIDACDDTMDRIGRPRGLIGYLALSDEHLERAGDTPKPAW RRLFRLRTSLYAVLWAGVGVTLIAALLLRPAVDLAVTPVRNPLFVTLSDGSIRNAYELRLRNMSGEDRRFRLAVDGSAGL RPSIEGSAGLDVPVAANATGLVRLYLTAPQGSDPATGALTDLRIRLDDAGGPEGGPVAAVKAAFHGARS >Mature_468_residues SEPLYAPRTPIFPRQISGAFRTAKWWILAVSLGIYLLTPWLRWDRGPNLPDQAVLIDIAGRRFFLFGIQIWPHEFYFVAG LLIMAGLGLFLFTSAAGRVWCGYACPQTVWTDLFLLVERRIEGDRNAQIRLHRQAWTAEKVWKRLLKWSVWAAISLLTGG AWVFYFADAPTLLNGLVTLTAHPVAWITIFVLTATTFVFAGFMREQICIYACPWPRIQAALMDEETITVAYRDWRGEPRG KRSETGRGDCIDCMACVNVCPMGIDIREGQQMACITCGLCIDACDDTMDRIGRPRGLIGYLALSDEHLERAGDTPKPAWR RLFRLRTSLYAVLWAGVGVTLIAALLLRPAVDLAVTPVRNPLFVTLSDGSIRNAYELRLRNMSGEDRRFRLAVDGSAGLR PSIEGSAGLDVPVAANATGLVRLYLTAPQGSDPATGALTDLRIRLDDAGGPEGGPVAAVKAAFHGARS
Specific function: Predicted to be involved in a redox process
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RDXA_RHOS4 (Q01854)
Other databases:
- EMBL: M94725 - EMBL: CP000144 - PIR: A45728 - RefSeq: YP_354543.1 - ProteinModelPortal: Q01854 - STRING: Q01854 - GeneID: 3721612 - GenomeReviews: CP000144_GR - KEGG: rsp:RSP_3027 - NMPDR: fig|272943.3.peg.3642 - eggNOG: COG0348 - HOGENOM: HBG700600 - OMA: LFRENAE - ProtClustDB: CLSK934195 - BioCyc: RSPH272943:RSP_3027-MONOMER - GO: GO:0006810 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 - Gene3D: G3DSA:1.10.1060.10 - Gene3D: G3DSA:2.60.40.10 - TIGRFAMs: TIGR02745
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51870; Mature: 51739
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd37345c)-; HASH(0xe8381f4)-; HASH(0xe72cfe8)-; HASH(0xe1e69fc)-; HASH(0xcd5ec5c)-;
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLYAPRTPIFPRQISGAFRTAKWWILAVSLGIYLLTPWLRWDRGPNLPDQAVLIDIA CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC GRRFFLFGIQIWPHEFYFVAGLLIMAGLGLFLFTSAAGRVWCGYACPQTVWTDLFLLVER CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH RIEGDRNAQIRLHRQAWTAEKVWKRLLKWSVWAAISLLTGGAWVFYFADAPTLLNGLVTL HHCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH TAHPVAWITIFVLTATTFVFAGFMREQICIYACPWPRIQAALMDEETITVAYRDWRGEPR HCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCEEEEEEECCCCCCC GKRSETGRGDCIDCMACVNVCPMGIDIREGQQMACITCGLCIDACDDTMDRIGRPRGLIG CCCCCCCCCCHHHHHHHHHHCCCCCEECCCCEEEEEEEHHHHHHHHHHHHHCCCCCCEEE YLALSDEHLERAGDTPKPAWRRLFRLRTSLYAVLWAGVGVTLIAALLLRPAVDLAVTPVR EEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC NPLFVTLSDGSIRNAYELRLRNMSGEDRRFRLAVDGSAGLRPSIEGSAGLDVPVAANATG CCEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCE LVRLYLTAPQGSDPATGALTDLRIRLDDAGGPEGGPVAAVKAAFHGARS EEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCH >Mature Secondary Structure SEPLYAPRTPIFPRQISGAFRTAKWWILAVSLGIYLLTPWLRWDRGPNLPDQAVLIDIA CCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC GRRFFLFGIQIWPHEFYFVAGLLIMAGLGLFLFTSAAGRVWCGYACPQTVWTDLFLLVER CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH RIEGDRNAQIRLHRQAWTAEKVWKRLLKWSVWAAISLLTGGAWVFYFADAPTLLNGLVTL HHCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH TAHPVAWITIFVLTATTFVFAGFMREQICIYACPWPRIQAALMDEETITVAYRDWRGEPR HCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCEEEEEEECCCCCCC GKRSETGRGDCIDCMACVNVCPMGIDIREGQQMACITCGLCIDACDDTMDRIGRPRGLIG CCCCCCCCCCHHHHHHHHHHCCCCCEECCCCEEEEEEEHHHHHHHHHHHHHCCCCCCEEE YLALSDEHLERAGDTPKPAWRRLFRLRTSLYAVLWAGVGVTLIAALLLRPAVDLAVTPVR EEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC NPLFVTLSDGSIRNAYELRLRNMSGEDRRFRLAVDGSAGLRPSIEGSAGLDVPVAANATG CCEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCE LVRLYLTAPQGSDPATGALTDLRIRLDDAGGPEGGPVAAVKAAFHGARS EEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1400197