| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461866
Identifier: 77461866
GI number: 77461866
Start: 6328611
End: 6329489
Strand: Direct
Name: 77461866
Synonym: Pfl01_5646
Alternate gene names: NA
Gene position: 6328611-6329489 (Clockwise)
Preceding gene: 77461865
Following gene: 77461867
Centisome position: 98.29
GC content: 64.16
Gene sequence:
>879_bases ATGAAACGTTTTCTTAGCATCGCCATGGCGTTGTGCATCGGCCTGACGATGAGCCTCGACGCCAACGCCAAGCGCTTTGG TGGTGGCAAAAGCGCCGGCGCTGCGCCGACGCACCAGACCAGCCAGATGGCTCCTTCTTCCCCAGGCATGGGCGGCGCTG CGGCGACCGCTGGTGCTGCCGGTGCCGCGGGCGCTGCGGCCAAGGCCGGCGGTGCTTCGAAATGGCTCGGCCCTCTGGCC GGCATCGCGGCCGGTGGCCTGCTCGCTTCCATGTTCATGGGCGGCGGCTTCGAAGGCATGCAGTTCTTCGATATCCTGAT CATGGCCGTGATCGCGTTCGTGATCTTCCGCTTCATCGCCGCCCGTCGCCGCAAGCAACAGGAGCAGTTCGCTCCGGCCG GCGCGCCGATGCAGCGTGAAGTGTTCGAACAGAAACCGGCAGCCATGGGTTCGATCTTCGGTGGTTCGGCCGCGCCTGCT GCCGCCCGTCCGGTGATCAACGCGCCGGCCTGGTTCAACGAACAGCGCTTCCTCGAAGCTGCCCGCAGCCACTTCCAGGC GCTGCAGCAGCACTGGGACGCCAACGAAATGGACAAGATCGCCGAGTTCGTGACTCCGCAGATGTTCGAGTTCCTCAAGC GCGAACGCGCGGAGCTGGGTGACGCCTTCCAGTCCACCTACATCGACAATCTCCAGGTGCAACTGGATGGCGTGGATGAC CGTGCGGACAAGACCATCGCCACCCTGACCTTCAACGGCGTGTCGAAGACCTCGCGTTTCGACCAGCAGGGCGAAGTGTT CAGCGAAAGCTGGAACATGGAACGTCCACAGGGCGACAACCAGCCTTGGCTGGTCGCCGGTATCCGCCAGAACGGCTGA
Upstream 100 bases:
>100_bases GTAACCTGTCAGGCAAAAGCCCGAAACACTCTCTCGCTAGCCAGTAACACTTCACCTGTGCAACATGGCGCGCGTGTCTC CACAAACGGGAATTCCCTTT
Downstream 100 bases:
>100_bases TCACCTACGACGTTTTACGTGCAGCAATGAAAACCCCGGCCTCGGCCGGGGTTTTCTATTTCGCGGTTGCATCTATAGCG AGCTACTGTATAAACCGCCC
Product: import inner membrane translocase subunit Tim44
Products: NA
Alternate protein names: Transmembrane Protein; Tim44 Domain Protein; Tim44-Like Domain Protein
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKRFLSIAMALCIGLTMSLDANAKRFGGGKSAGAAPTHQTSQMAPSSPGMGGAAATAGAAGAAGAAAKAGGASKWLGPLA GIAAGGLLASMFMGGGFEGMQFFDILIMAVIAFVIFRFIAARRRKQQEQFAPAGAPMQREVFEQKPAAMGSIFGGSAAPA AARPVINAPAWFNEQRFLEAARSHFQALQQHWDANEMDKIAEFVTPQMFEFLKRERAELGDAFQSTYIDNLQVQLDGVDD RADKTIATLTFNGVSKTSRFDQQGEVFSESWNMERPQGDNQPWLVAGIRQNG
Sequences:
>Translated_292_residues MKRFLSIAMALCIGLTMSLDANAKRFGGGKSAGAAPTHQTSQMAPSSPGMGGAAATAGAAGAAGAAAKAGGASKWLGPLA GIAAGGLLASMFMGGGFEGMQFFDILIMAVIAFVIFRFIAARRRKQQEQFAPAGAPMQREVFEQKPAAMGSIFGGSAAPA AARPVINAPAWFNEQRFLEAARSHFQALQQHWDANEMDKIAEFVTPQMFEFLKRERAELGDAFQSTYIDNLQVQLDGVDD RADKTIATLTFNGVSKTSRFDQQGEVFSESWNMERPQGDNQPWLVAGIRQNG >Mature_292_residues MKRFLSIAMALCIGLTMSLDANAKRFGGGKSAGAAPTHQTSQMAPSSPGMGGAAATAGAAGAAGAAAKAGGASKWLGPLA GIAAGGLLASMFMGGGFEGMQFFDILIMAVIAFVIFRFIAARRRKQQEQFAPAGAPMQREVFEQKPAAMGSIFGGSAAPA AARPVINAPAWFNEQRFLEAARSHFQALQQHWDANEMDKIAEFVTPQMFEFLKRERAELGDAFQSTYIDNLQVQLDGVDD RADKTIATLTFNGVSKTSRFDQQGEVFSESWNMERPQGDNQPWLVAGIRQNG
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31134; Mature: 31134
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFLSIAMALCIGLTMSLDANAKRFGGGKSAGAAPTHQTSQMAPSSPGMGGAAATAGAA CHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCC GAAGAAAKAGGASKWLGPLAGIAAGGLLASMFMGGGFEGMQFFDILIMAVIAFVIFRFIA CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ARRRKQQEQFAPAGAPMQREVFEQKPAAMGSIFGGSAAPAAARPVINAPAWFNEQRFLEA HHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHH ARSHFQALQQHWDANEMDKIAEFVTPQMFEFLKRERAELGDAFQSTYIDNLQVQLDGVDD HHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC RADKTIATLTFNGVSKTSRFDQQGEVFSESWNMERPQGDNQPWLVAGIRQNG CCCCEEEEEEECCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure MKRFLSIAMALCIGLTMSLDANAKRFGGGKSAGAAPTHQTSQMAPSSPGMGGAAATAGAA CHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCC GAAGAAAKAGGASKWLGPLAGIAAGGLLASMFMGGGFEGMQFFDILIMAVIAFVIFRFIA CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ARRRKQQEQFAPAGAPMQREVFEQKPAAMGSIFGGSAAPAAARPVINAPAWFNEQRFLEA HHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHH ARSHFQALQQHWDANEMDKIAEFVTPQMFEFLKRERAELGDAFQSTYIDNLQVQLDGVDD HHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC RADKTIATLTFNGVSKTSRFDQQGEVFSESWNMERPQGDNQPWLVAGIRQNG CCCCEEEEEEECCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA