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The map label for this gene is 77461865

Identifier: 77461865

GI number: 77461865

Start: 6327995

End: 6328435

Strand: Direct

Name: 77461865

Synonym: Pfl01_5645

Alternate gene names: NA

Gene position: 6327995-6328435 (Clockwise)

Preceding gene: 77461864

Following gene: 77461866

Centisome position: 98.29

GC content: 61.9

Gene sequence:

>441_bases
ATGGGCACTGGCTTCTTTTCCTCCTGGACATTCTGGGCCCTGCTCTCGGCCACCTTCGCCGCACTGACGGCCATCTTCGC
CAAGATCGGCATCGAAAACGTCAACTCCGACTTCGCCACCCTGCTGCGCACAATCGTCGTATTGGTCAGTCTGGCCTTGA
TTTTGTACGCCACGGGCCAATATCAGTCCCTGGGATCGATCTCCGCCAAGAGCTACCTGTTCCTGCTGTTGTCGGGCCTG
GGCACCGGCGCTTCATGGTTGTGCTACTTCCGGGCGTTGAAAGTCGGCCCGGCATCGCTGGTCGCCCCGGTGGACAAGCT
CAGTGTGGTCTTCGTGGCGGTGCTCGGTGTGATCCTGCTGGGCGAGAAACTCGACCTGCGCCAGTGGGGCGGCATCGGCT
TGATCACCGCCGGTGTGGTGATGCTGGCCTTGCGGCGCTGA

Upstream 100 bases:

>100_bases
GCAGCAAGTGGCTGATGCTCGGGTACGCGAAGCTGGAAGCCATATAAGTCACCGTTCGTTCCCGCCCCCGGCGCGGGAAC
GAACACTGGAGGCAACGTCG

Downstream 100 bases:

>100_bases
TCCATTTCCTGCTGAACCTATCTCCTTTTCCTACAGACAAAAGTACATGGCCTTATTGTCCTGACCGAGCTGAACGTAAC
CTGTCAGGCAAAAGCCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MGTGFFSSWTFWALLSATFAALTAIFAKIGIENVNSDFATLLRTIVVLVSLALILYATGQYQSLGSISAKSYLFLLLSGL
GTGASWLCYFRALKVGPASLVAPVDKLSVVFVAVLGVILLGEKLDLRQWGGIGLITAGVVMLALRR

Sequences:

>Translated_146_residues
MGTGFFSSWTFWALLSATFAALTAIFAKIGIENVNSDFATLLRTIVVLVSLALILYATGQYQSLGSISAKSYLFLLLSGL
GTGASWLCYFRALKVGPASLVAPVDKLSVVFVAVLGVILLGEKLDLRQWGGIGLITAGVVMLALRR
>Mature_145_residues
GTGFFSSWTFWALLSATFAALTAIFAKIGIENVNSDFATLLRTIVVLVSLALILYATGQYQSLGSISAKSYLFLLLSGLG
TGASWLCYFRALKVGPASLVAPVDKLSVVFVAVLGVILLGEKLDLRQWGGIGLITAGVVMLALRR

Specific function: Unknown

COG id: COG2510

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 15506; Mature: 15374

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTGFFSSWTFWALLSATFAALTAIFAKIGIENVNSDFATLLRTIVVLVSLALILYATGQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
YQSLGSISAKSYLFLLLSGLGTGASWLCYFRALKVGPASLVAPVDKLSVVFVAVLGVILL
CHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GEKLDLRQWGGIGLITAGVVMLALRR
CCCCCHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
GTGFFSSWTFWALLSATFAALTAIFAKIGIENVNSDFATLLRTIVVLVSLALILYATGQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
YQSLGSISAKSYLFLLLSGLGTGASWLCYFRALKVGPASLVAPVDKLSVVFVAVLGVILL
CHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GEKLDLRQWGGIGLITAGVVMLALRR
CCCCCHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]