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The map label for this gene is oruR [H]

Identifier: 77461850

GI number: 77461850

Start: 6305290

End: 6306288

Strand: Direct

Name: oruR [H]

Synonym: Pfl01_5630

Alternate gene names: 77461850

Gene position: 6305290-6306288 (Clockwise)

Preceding gene: 77461848

Following gene: 77461851

Centisome position: 97.93

GC content: 64.06

Gene sequence:

>999_bases
ATGCTTCACTCCCACCTCACCACCCTCAACGCCGTCGCCCTGGTGCTCAACACCTTCAGGGATCAAGGCCTGTCCAGCGA
AGCACTGCTCGCCGGCAGCGGCATCAGCGCGGCGGATCTAAGCCGGGCCGACACCCGCATTACCACCAATCAGGAGATGC
AGGTCTGCGCCAATGCGGTCGCGCTCAAGCACGACATCGGCCTGGAGCTGGGCCGGCGCATGCATGTTTCCTGCTACGGC
ATCCTCGGTTACGCGCTGCTGACCTGTGCCACCTTCGGTGACGCTTTGCGGCTGGCGATCCGTTATCCGGCGCTGCTGGG
AACACTTTTCGAACTGAGCCTGGAAGACGACGGCGAGCGCGTCTGGTTCGTCGCCGCCGATTACCGCGAAAGCCCGGCGA
TGGCCGTATTCAACGCCGAGTTCTGTCTGGTGTCGCTGAAAGTCATCTGCGACGACCTGCTCGGCCATCCGCTGCCATTG
CTGGCCGCGCGCTTCGAACACGCCGCGCCGGATTACCGCGACAGCTACGCCGAACACTTCAAGGCGCCGCTGCACTTCGG
CGCCAAGGACAACGCCTTCGCCTTCGACCGGCGCTGGCTCGACCAGCCGCTGCCGCTGGCCGACATCATCACCCACCAGG
CCATGGCCGAGCGTTGCCGCAAACAGAACACCGAGTTCACCGGCCGCCAGGCATGGCTGGGTCGGATCCGCCAGTTGCTC
AGCGCCCAACTCAACGCCGCACCGGGGCTGGAAGGCCTGGCGCAACAGATGAACTGCTCGCCGCGCACCCTGCGCCGGCA
TCTGAAGGACATGGGTTGCAGCTATCAGGAATTGCTCGACGAACTGCGTTTCGAGCGGGCCAAGCAGATGCTTTGCGAGG
ATCAGTTGCCGATTTATCGCATCGCCGAAACCCTCGGCTTCAGCGAGACCGCAAGCTTCCGCCATGCCTTCGTGCGCTGG
AGCGGTGTGGCACCGAGTCAATTCCGGCCACACGGTTAA

Upstream 100 bases:

>100_bases
CCAACTAACGAATCGGGCAAAGTTATCTTGCTGATTTTCGACAGCTGTCGCCGGCACATAACTTGCTCGCCTTTCCGGCA
CCGCCCGGCTGGAAGATCCT

Downstream 100 bases:

>100_bases
ACCGTCGAGGGGCGATATCAGGTCAGTATTTTTGGCCACATCGATCCCCTTTTGGCCTCTCTGGCCGTTCTCCGATTCGG
CTCACGCCGCAACACTGTGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLHSHLTTLNAVALVLNTFRDQGLSSEALLAGSGISAADLSRADTRITTNQEMQVCANAVALKHDIGLELGRRMHVSCYG
ILGYALLTCATFGDALRLAIRYPALLGTLFELSLEDDGERVWFVAADYRESPAMAVFNAEFCLVSLKVICDDLLGHPLPL
LAARFEHAAPDYRDSYAEHFKAPLHFGAKDNAFAFDRRWLDQPLPLADIITHQAMAERCRKQNTEFTGRQAWLGRIRQLL
SAQLNAAPGLEGLAQQMNCSPRTLRRHLKDMGCSYQELLDELRFERAKQMLCEDQLPIYRIAETLGFSETASFRHAFVRW
SGVAPSQFRPHG

Sequences:

>Translated_332_residues
MLHSHLTTLNAVALVLNTFRDQGLSSEALLAGSGISAADLSRADTRITTNQEMQVCANAVALKHDIGLELGRRMHVSCYG
ILGYALLTCATFGDALRLAIRYPALLGTLFELSLEDDGERVWFVAADYRESPAMAVFNAEFCLVSLKVICDDLLGHPLPL
LAARFEHAAPDYRDSYAEHFKAPLHFGAKDNAFAFDRRWLDQPLPLADIITHQAMAERCRKQNTEFTGRQAWLGRIRQLL
SAQLNAAPGLEGLAQQMNCSPRTLRRHLKDMGCSYQELLDELRFERAKQMLCEDQLPIYRIAETLGFSETASFRHAFVRW
SGVAPSQFRPHG
>Mature_332_residues
MLHSHLTTLNAVALVLNTFRDQGLSSEALLAGSGISAADLSRADTRITTNQEMQVCANAVALKHDIGLELGRRMHVSCYG
ILGYALLTCATFGDALRLAIRYPALLGTLFELSLEDDGERVWFVAADYRESPAMAVFNAEFCLVSLKVICDDLLGHPLPL
LAARFEHAAPDYRDSYAEHFKAPLHFGAKDNAFAFDRRWLDQPLPLADIITHQAMAERCRKQNTEFTGRQAWLGRIRQLL
SAQLNAAPGLEGLAQQMNCSPRTLRRHLKDMGCSYQELLDELRFERAKQMLCEDQLPIYRIAETLGFSETASFRHAFVRW
SGVAPSQFRPHG

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37123; Mature: 37123

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHSHLTTLNAVALVLNTFRDQGLSSEALLAGSGISAADLSRADTRITTNQEMQVCANAV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHH
ALKHDIGLELGRRMHVSCYGILGYALLTCATFGDALRLAIRYPALLGTLFELSLEDDGER
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VWFVAADYRESPAMAVFNAEFCLVSLKVICDDLLGHPLPLLAARFEHAAPDYRDSYAEHF
EEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH
KAPLHFGAKDNAFAFDRRWLDQPLPLADIITHQAMAERCRKQNTEFTGRQAWLGRIRQLL
CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SAQLNAAPGLEGLAQQMNCSPRTLRRHLKDMGCSYQELLDELRFERAKQMLCEDQLPIYR
HHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
IAETLGFSETASFRHAFVRWSGVAPSQFRPHG
HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLHSHLTTLNAVALVLNTFRDQGLSSEALLAGSGISAADLSRADTRITTNQEMQVCANAV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHH
ALKHDIGLELGRRMHVSCYGILGYALLTCATFGDALRLAIRYPALLGTLFELSLEDDGER
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VWFVAADYRESPAMAVFNAEFCLVSLKVICDDLLGHPLPLLAARFEHAAPDYRDSYAEHF
EEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH
KAPLHFGAKDNAFAFDRRWLDQPLPLADIITHQAMAERCRKQNTEFTGRQAWLGRIRQLL
CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SAQLNAAPGLEGLAQQMNCSPRTLRRHLKDMGCSYQELLDELRFERAKQMLCEDQLPIYR
HHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
IAETLGFSETASFRHAFVRWSGVAPSQFRPHG
HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]