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The map label for this gene is ubiC2

Identifier: 77461824

GI number: 77461824

Start: 6275924

End: 6276475

Strand: Direct

Name: ubiC2

Synonym: Pfl01_5603

Alternate gene names: 77461824

Gene position: 6275924-6276475 (Clockwise)

Preceding gene: 77461820

Following gene: 77461825

Centisome position: 97.48

GC content: 66.67

Gene sequence:

>552_bases
GTGCAACACACAAACGCTCCGCTGTGGCGCCCGCAAAGCGAACTGACACCCCTGCCCGACACATCCACGCTCGACTGGCT
GTTCGACGAAGGCTCCCTGACCCGCCGGCTGACGCACCTGTCCGATGACGGCTTCAGCGTGACGCCGCTGTTCGAAGGCT
GGCAGACCCTGCGCGACGACGAATGCGCCGCGCTGGACCTGGCCGAAGGCAGCGAGGGCTGGGTGCGCGAGGTGTATCTG
CGTGGGCATGGCCAGGCCTGGGTGTTCGCCCGCAGCGTGGCGTCGCGCAGTGCCTTGCAGGGCGACGGCTTGCACATGGA
TGAGTTGGGCAGCCGCTCGCTGGGCGAACTGCTGTTCTGCGATCACGCGTTTCAGCGCCGCGCCATTGAAGTCTGCCATT
ACCCGGAACACTGGTTGCCCGAAGGTTCCCGGGCTGCCGGCCTGTGGGGACGGCGTTCGCGTTTCGACCGTGGCGCATTG
AGCGTACTGGTGGCGGAGATTTTCCTGCCTACGCTGTGGGAAGCCGTCCGCGCCCGTCCGGAGAACTGCTGA

Upstream 100 bases:

>100_bases
AGATGCAAGCCTGTTCGGCGCAGCGGCGACCCGGATCAATCAAACTCGCGGTGCAGCATGGTAAGCTCGCCGCCTCATTT
GCTGCCAATAATGACTCATT

Downstream 100 bases:

>100_bases
TGTATCAAAGCCTGCTCAAATCTCTGAATCGCTTGAACCCGCGCGCCTGGGACTTCATCCAGCTGACCCGGATGGACAAG
CCGATCGGCATTTACCTGCT

Product: chorismate lyase

Products: NA

Alternate protein names: CL 2; CPL 2

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MQHTNAPLWRPQSELTPLPDTSTLDWLFDEGSLTRRLTHLSDDGFSVTPLFEGWQTLRDDECAALDLAEGSEGWVREVYL
RGHGQAWVFARSVASRSALQGDGLHMDELGSRSLGELLFCDHAFQRRAIEVCHYPEHWLPEGSRAAGLWGRRSRFDRGAL
SVLVAEIFLPTLWEAVRARPENC

Sequences:

>Translated_183_residues
MQHTNAPLWRPQSELTPLPDTSTLDWLFDEGSLTRRLTHLSDDGFSVTPLFEGWQTLRDDECAALDLAEGSEGWVREVYL
RGHGQAWVFARSVASRSALQGDGLHMDELGSRSLGELLFCDHAFQRRAIEVCHYPEHWLPEGSRAAGLWGRRSRFDRGAL
SVLVAEIFLPTLWEAVRARPENC
>Mature_183_residues
MQHTNAPLWRPQSELTPLPDTSTLDWLFDEGSLTRRLTHLSDDGFSVTPLFEGWQTLRDDECAALDLAEGSEGWVREVYL
RGHGQAWVFARSVASRSALQGDGLHMDELGSRSLGELLFCDHAFQRRAIEVCHYPEHWLPEGSRAAGLWGRRSRFDRGAL
SVLVAEIFLPTLWEAVRARPENC

Specific function: Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway

COG id: COG3161

COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiC family

Homologues:

Organism=Escherichia coli, GI87082361, Length=154, Percent_Identity=34.4155844155844, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UBIC2_PSEPF (Q3K4G4)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_351331.1
- ProteinModelPortal:   Q3K4G4
- SMR:   Q3K4G4
- STRING:   Q3K4G4
- GeneID:   3717679
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_5603
- eggNOG:   COG3161
- HOGENOM:   HBG644467
- OMA:   EVCHYPE
- ProtClustDB:   CLSK869287
- BioCyc:   PFLU205922:PFL_5603-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01632
- InterPro:   IPR007440

Pfam domain/function: PF04345 Chor_lyase

EC number: =4.1.3.40

Molecular weight: Translated: 20716; Mature: 20716

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: BINDING 76-76 BINDING 114-114

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHTNAPLWRPQSELTPLPDTSTLDWLFDEGSLTRRLTHLSDDGFSVTPLFEGWQTLRDD
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCEECHHHHHHHHHCCC
ECAALDLAEGSEGWVREVYLRGHGQAWVFARSVASRSALQGDGLHMDELGSRSLGELLFC
CCCEEECCCCCCCHHEEEEECCCCCEEEHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH
DHAFQRRAIEVCHYPEHWLPEGSRAAGLWGRRSRFDRGALSVLVAEIFLPTLWEAVRARP
HHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
ENC
CCC
>Mature Secondary Structure
MQHTNAPLWRPQSELTPLPDTSTLDWLFDEGSLTRRLTHLSDDGFSVTPLFEGWQTLRDD
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCEECHHHHHHHHHCCC
ECAALDLAEGSEGWVREVYLRGHGQAWVFARSVASRSALQGDGLHMDELGSRSLGELLFC
CCCEEECCCCCCCHHEEEEECCCCCEEEHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH
DHAFQRRAIEVCHYPEHWLPEGSRAAGLWGRRSRFDRGALSVLVAEIFLPTLWEAVRARP
HHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
ENC
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA