Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77461661

Identifier: 77461661

GI number: 77461661

Start: 6105585

End: 6106034

Strand: Direct

Name: 77461661

Synonym: Pfl01_5440

Alternate gene names: NA

Gene position: 6105585-6106034 (Clockwise)

Preceding gene: 77461659

Following gene: 77461662

Centisome position: 94.83

GC content: 60.22

Gene sequence:

>450_bases
ATGGCCTACTGGCTGATGAAATCCGAGCCCGACGAGCTCTCGATCAAGGGCCTGGAAAAGCTCGGCAAGGCGCGCTGGGA
CGGGGTTCGCAACTATCAGGCACGCAATTTCCTGCGGGCCATGGCGGTGGGGGACGAATTCTTTTTCTACCACTCCAGCT
GCCCGGAGCCGGGAATTGCCGGAATCGGCAAAATAATCGAAGCCGCGTACCCGGATCCCACCGCACTGGAACCGCAAAGC
CATTACTACGACCCGAAAGCCACCCCGGATAAAAACCCCTGGAGCGCGATTGATGTCGCCCACGTCGAAACTTTCAGCCG
GGTCTTGAAGCTGGATTATCTGAAACAGCAGACCGCGTTGGCCGAGATGCCGCTGGTGCAGAAGGGCTCGCGACTGTCGG
TGATGCCGGTGACGGCCGAGCAGTGGGCGGCAGTACTCGGTTTGCGCTGA

Upstream 100 bases:

>100_bases
ACAACGTGAACCTCTGCGCAAATGCTGACGTCAACCGACCGTCGGTTTGTCATAAAATTGCCGGACAACCTGCCCAATGA
CCGCTTGAGGAGCACACACC

Downstream 100 bases:

>100_bases
GAGGCGTTGCCCCTTGCGGCTGACATGGCTCAGCGCTGCCTGCGTCGCCGATCATTTGACAGACATCAAGCGATGCCATC
GCTTTACCCGTCAGACTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAYWLMKSEPDELSIKGLEKLGKARWDGVRNYQARNFLRAMAVGDEFFFYHSSCPEPGIAGIGKIIEAAYPDPTALEPQS
HYYDPKATPDKNPWSAIDVAHVETFSRVLKLDYLKQQTALAEMPLVQKGSRLSVMPVTAEQWAAVLGLR

Sequences:

>Translated_149_residues
MAYWLMKSEPDELSIKGLEKLGKARWDGVRNYQARNFLRAMAVGDEFFFYHSSCPEPGIAGIGKIIEAAYPDPTALEPQS
HYYDPKATPDKNPWSAIDVAHVETFSRVLKLDYLKQQTALAEMPLVQKGSRLSVMPVTAEQWAAVLGLR
>Mature_148_residues
AYWLMKSEPDELSIKGLEKLGKARWDGVRNYQARNFLRAMAVGDEFFFYHSSCPEPGIAGIGKIIEAAYPDPTALEPQSH
YYDPKATPDKNPWSAIDVAHVETFSRVLKLDYLKQQTALAEMPLVQKGSRLSVMPVTAEQWAAVLGLR

Specific function: Unknown

COG id: COG2947

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI83267861, Length=166, Percent_Identity=44.578313253012, Blast_Score=132, Evalue=1e-31,
Organism=Homo sapiens, GI40806221, Length=166, Percent_Identity=44.578313253012, Blast_Score=132, Evalue=1e-31,
Organism=Homo sapiens, GI7661804, Length=166, Percent_Identity=44.578313253012, Blast_Score=132, Evalue=1e-31,
Organism=Homo sapiens, GI83267859, Length=105, Percent_Identity=52.3809523809524, Blast_Score=112, Evalue=1e-25,
Organism=Homo sapiens, GI40806219, Length=105, Percent_Identity=52.3809523809524, Blast_Score=112, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16744; Mature: 16613

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYWLMKSEPDELSIKGLEKLGKARWDGVRNYQARNFLRAMAVGDEFFFYHSSCPEPGIA
CEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCHH
GIGKIIEAAYPDPTALEPQSHYYDPKATPDKNPWSAIDVAHVETFSRVLKLDYLKQQTAL
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AEMPLVQKGSRLSVMPVTAEQWAAVLGLR
HHCCHHCCCCCEEEEECCHHHHHHHHCCC
>Mature Secondary Structure 
AYWLMKSEPDELSIKGLEKLGKARWDGVRNYQARNFLRAMAVGDEFFFYHSSCPEPGIA
EEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCHH
GIGKIIEAAYPDPTALEPQSHYYDPKATPDKNPWSAIDVAHVETFSRVLKLDYLKQQTAL
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AEMPLVQKGSRLSVMPVTAEQWAAVLGLR
HHCCHHCCCCCEEEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA