| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77461644
Identifier: 77461644
GI number: 77461644
Start: 6088604
End: 6088942
Strand: Direct
Name: 77461644
Synonym: Pfl01_5423
Alternate gene names: NA
Gene position: 6088604-6088942 (Clockwise)
Preceding gene: 77461642
Following gene: 77461645
Centisome position: 94.57
GC content: 64.9
Gene sequence:
>339_bases ATGCCACACCTCGAAGCCGTCAACACCCCTGCGCCCCGTGCCGATGTGTGGAACGCCAGCAACGCCCATTGCCTCGCGCA GTACCAGATCCTGGCCGAGGCCGAGCCGGATTTGCTGGTGCGGGTGCTGAACCTGTTCGCCTTGCAGTGCCTCACGCCGG AGCAGGTCAATGTCCAGCGGCTGGACGATCTGCTGTCGATCGACATCGTCATGGGTGGCCTGAGCTGGCACCGCGCCCAG GTGATCGCGGAAAAACTTCGTAACCTGATCAGCGTCTGCTCGGTGAACCTGCAAAACCCCGAGGCGGCGTGGGATGCGCC GGCGCAGGCGGCTGGCTGA
Upstream 100 bases:
>100_bases CGAATTGATATACCTATTCAATCGCCTGTTCGGCTCATCTTAGACAAGAAATGCCCGGCATCGAATGTAAAAATTCCTCC ACTGATTCCGGAGACCTGTC
Downstream 100 bases:
>100_bases CAAGAACCGAAACGTCTTCGTCGGGTAGTGGCCCAACGGTCAGCGGGGCCACGACTATCCTTTGCGCACTGTCGTTCAAA AGGAGCCCGCATGTCCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPHLEAVNTPAPRADVWNASNAHCLAQYQILAEAEPDLLVRVLNLFALQCLTPEQVNVQRLDDLLSIDIVMGGLSWHRAQ VIAEKLRNLISVCSVNLQNPEAAWDAPAQAAG
Sequences:
>Translated_112_residues MPHLEAVNTPAPRADVWNASNAHCLAQYQILAEAEPDLLVRVLNLFALQCLTPEQVNVQRLDDLLSIDIVMGGLSWHRAQ VIAEKLRNLISVCSVNLQNPEAAWDAPAQAAG >Mature_111_residues PHLEAVNTPAPRADVWNASNAHCLAQYQILAEAEPDLLVRVLNLFALQCLTPEQVNVQRLDDLLSIDIVMGGLSWHRAQV IAEKLRNLISVCSVNLQNPEAAWDAPAQAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12247; Mature: 12116
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHLEAVNTPAPRADVWNASNAHCLAQYQILAEAEPDLLVRVLNLFALQCLTPEQVNVQR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHH LDDLLSIDIVMGGLSWHRAQVIAEKLRNLISVCSVNLQNPEAAWDAPAQAAG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PHLEAVNTPAPRADVWNASNAHCLAQYQILAEAEPDLLVRVLNLFALQCLTPEQVNVQR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHH LDDLLSIDIVMGGLSWHRAQVIAEKLRNLISVCSVNLQNPEAAWDAPAQAAG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA